Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12212:12571
Extra
PDB:
ATOM 1 O3' A A2211 27.623 -1.754 74.406 1.00138.58 O
ATOM 2 P C A2212 26.952 -2.843 73.403 1.00 63.30 P
ATOM 3 OP1 C A2212 25.924 -3.621 74.227 1.00 63.38 O
ATOM 4 OP2 C A2212 28.103 -3.613 72.756 1.00 63.17 O
ATOM 5 O5' C A2212 26.197 -1.925 72.299 1.00 63.36 O
ATOM 6 C5' C A2212 24.774 -1.905 72.204 1.00 63.47 C
ATOM 7 C4' C A2212 24.295 -2.073 70.777 1.00 63.46 C
ATOM 8 O4' C A2212 25.062 -1.233 69.888 1.00 63.42 O
ATOM 9 C3' C A2212 24.427 -3.450 70.179 1.00 63.37 C
ATOM 10 O3' C A2212 23.380 -4.304 70.563 1.00 63.43 O
ATOM 11 C2' C A2212 24.462 -3.172 68.677 1.00 63.36 C
ATOM 12 O2' C A2212 23.161 -3.044 68.156 1.00 63.47 O
ATOM 13 C1' C A2212 25.152 -1.819 68.613 1.00 63.37 C
ATOM 14 N1 C A2212 26.586 -1.937 68.245 1.00 63.25 N
ATOM 15 C2 C A2212 26.952 -2.174 66.913 1.00 63.20 C
ATOM 16 O2 C A2212 26.095 -2.299 66.053 1.00 63.26 O
ATOM 17 N3 C A2212 28.252 -2.243 66.577 1.00 63.11 N
ATOM 18 C4 C A2212 29.176 -2.108 67.525 1.00 63.06 C
ATOM 19 N4 C A2212 30.456 -2.211 67.179 1.00 62.97 N
ATOM 20 C5 C A2212 28.820 -1.874 68.876 1.00 63.10 C
ATOM 21 C6 C A2212 27.535 -1.788 69.198 1.00 63.20 C
ATOM 22 P C A2213 23.474 -5.873 70.262 1.00 40.39 P
ATOM 23 OP1 C A2213 22.105 -6.432 70.379 1.00 40.50 O
ATOM 24 OP2 C A2213 24.556 -6.433 71.144 1.00 40.31 O
ATOM 25 O5' C A2213 23.936 -5.902 68.745 1.00 40.33 O
TER
ATOM 1 O3' U B2570 30.244 -9.431 58.715 1.00 39.88 O
ATOM 2 P A B2571 29.909 -8.468 57.430 1.00 45.42 P
ATOM 3 OP1 A B2571 29.992 -9.310 56.219 1.00 45.49 O
ATOM 4 OP2 A B2571 30.771 -7.270 57.498 1.00 45.37 O
ATOM 5 O5' A B2571 28.360 -8.047 57.719 1.00 45.51 O
ATOM 6 C5' A B2571 27.320 -9.040 57.790 1.00 45.57 C
ATOM 7 C4' A B2571 26.125 -8.629 58.655 1.00 45.62 C
ATOM 8 O4' A B2571 26.438 -8.722 60.055 1.00 45.52 O
ATOM 9 C3' A B2571 25.603 -7.223 58.508 1.00 45.68 C
ATOM 10 O3' A B2571 24.798 -7.052 57.370 1.00 45.82 O
ATOM 11 C2' A B2571 24.845 -7.000 59.814 1.00 45.68 C
ATOM 12 O2' A B2571 23.562 -7.622 59.781 1.00 45.79 O
ATOM 13 C1' A B2571 25.712 -7.752 60.791 1.00 45.55 C
ATOM 14 N9 A B2571 26.675 -6.851 61.466 1.00 45.46 N
ATOM 15 C8 A B2571 27.999 -6.897 61.228 1.00 45.37 C
ATOM 16 N7 A B2571 28.663 -6.056 61.940 1.00 45.32 N
ATOM 17 C5 A B2571 27.750 -5.383 62.708 1.00 45.38 C
ATOM 18 C6 A B2571 27.904 -4.345 63.665 1.00 45.37 C
ATOM 19 N6 A B2571 29.071 -3.788 64.007 1.00 45.30 N
ATOM 20 N1 A B2571 26.818 -3.884 64.290 1.00 45.45 N
ATOM 21 C2 A B2571 25.663 -4.461 63.924 1.00 45.53 C
ATOM 22 N3 A B2571 25.415 -5.439 63.052 1.00 45.54 N
ATOM 23 C4 A B2571 26.515 -5.877 62.444 1.00 45.46 C
ATOM 24 P A B2572 24.703 -5.620 56.709 1.00 52.83 P
ATOM 25 OP1 A B2572 23.753 -5.750 55.610 1.00 52.99 O
ATOM 26 OP2 A B2572 26.079 -5.173 56.401 1.00 52.74 O
ATOM 27 O5' A B2572 24.128 -4.714 57.889 1.00 52.83 O
TER
ATOM 2 P C A2212 26.952 -2.843 73.403 1.00 63.30 P
ATOM 3 OP1 C A2212 25.924 -3.621 74.227 1.00 63.38 O
ATOM 4 OP2 C A2212 28.103 -3.613 72.756 1.00 63.17 O
ATOM 5 O5' C A2212 26.197 -1.925 72.299 1.00 63.36 O
ATOM 6 C5' C A2212 24.774 -1.905 72.204 1.00 63.47 C
ATOM 7 C4' C A2212 24.295 -2.073 70.777 1.00 63.46 C
ATOM 8 O4' C A2212 25.062 -1.233 69.888 1.00 63.42 O
ATOM 9 C3' C A2212 24.427 -3.450 70.179 1.00 63.37 C
ATOM 10 O3' C A2212 23.380 -4.304 70.563 1.00 63.43 O
ATOM 11 C2' C A2212 24.462 -3.172 68.677 1.00 63.36 C
ATOM 12 O2' C A2212 23.161 -3.044 68.156 1.00 63.47 O
ATOM 13 C1' C A2212 25.152 -1.819 68.613 1.00 63.37 C
ATOM 14 N1 C A2212 26.586 -1.937 68.245 1.00 63.25 N
ATOM 15 C2 C A2212 26.952 -2.174 66.913 1.00 63.20 C
ATOM 16 O2 C A2212 26.095 -2.299 66.053 1.00 63.26 O
ATOM 17 N3 C A2212 28.252 -2.243 66.577 1.00 63.11 N
ATOM 18 C4 C A2212 29.176 -2.108 67.525 1.00 63.06 C
ATOM 19 N4 C A2212 30.456 -2.211 67.179 1.00 62.97 N
ATOM 20 C5 C A2212 28.820 -1.874 68.876 1.00 63.10 C
ATOM 21 C6 C A2212 27.535 -1.788 69.198 1.00 63.20 C
ATOM 22 P C A2213 23.474 -5.873 70.262 1.00 40.39 P
ATOM 23 OP1 C A2213 22.105 -6.432 70.379 1.00 40.50 O
ATOM 24 OP2 C A2213 24.556 -6.433 71.144 1.00 40.31 O
ATOM 25 O5' C A2213 23.936 -5.902 68.745 1.00 40.33 O
TER
ATOM 1 O3' U B2570 30.244 -9.431 58.715 1.00 39.88 O
ATOM 2 P A B2571 29.909 -8.468 57.430 1.00 45.42 P
ATOM 3 OP1 A B2571 29.992 -9.310 56.219 1.00 45.49 O
ATOM 4 OP2 A B2571 30.771 -7.270 57.498 1.00 45.37 O
ATOM 5 O5' A B2571 28.360 -8.047 57.719 1.00 45.51 O
ATOM 6 C5' A B2571 27.320 -9.040 57.790 1.00 45.57 C
ATOM 7 C4' A B2571 26.125 -8.629 58.655 1.00 45.62 C
ATOM 8 O4' A B2571 26.438 -8.722 60.055 1.00 45.52 O
ATOM 9 C3' A B2571 25.603 -7.223 58.508 1.00 45.68 C
ATOM 10 O3' A B2571 24.798 -7.052 57.370 1.00 45.82 O
ATOM 11 C2' A B2571 24.845 -7.000 59.814 1.00 45.68 C
ATOM 12 O2' A B2571 23.562 -7.622 59.781 1.00 45.79 O
ATOM 13 C1' A B2571 25.712 -7.752 60.791 1.00 45.55 C
ATOM 14 N9 A B2571 26.675 -6.851 61.466 1.00 45.46 N
ATOM 15 C8 A B2571 27.999 -6.897 61.228 1.00 45.37 C
ATOM 16 N7 A B2571 28.663 -6.056 61.940 1.00 45.32 N
ATOM 17 C5 A B2571 27.750 -5.383 62.708 1.00 45.38 C
ATOM 18 C6 A B2571 27.904 -4.345 63.665 1.00 45.37 C
ATOM 19 N6 A B2571 29.071 -3.788 64.007 1.00 45.30 N
ATOM 20 N1 A B2571 26.818 -3.884 64.290 1.00 45.45 N
ATOM 21 C2 A B2571 25.663 -4.461 63.924 1.00 45.53 C
ATOM 22 N3 A B2571 25.415 -5.439 63.052 1.00 45.54 N
ATOM 23 C4 A B2571 26.515 -5.877 62.444 1.00 45.46 C
ATOM 24 P A B2572 24.703 -5.620 56.709 1.00 52.83 P
ATOM 25 OP1 A B2572 23.753 -5.750 55.610 1.00 52.99 O
ATOM 26 OP2 A B2572 26.079 -5.173 56.401 1.00 52.74 O
ATOM 27 O5' A B2572 24.128 -4.714 57.889 1.00 52.83 O
TER
Atoms:
C2: (26.952,-2.174,66.913)
OP1: (25.924,-3.621,74.227)
OP2: (28.103,-3.613,72.756)
C4: (29.176,-2.108,67.525)
O5': (26.197,-1.925,72.299)
C3': (24.427,-3.450,70.179)
C1': (25.152,-1.819,68.613)
O4': (25.062,-1.233,69.888)
C5': (24.774,-1.905,72.204)
P: (26.952,-2.843,73.403)
O2: (26.095,-2.299,66.053)
C4': (24.295,-2.073,70.777)
C2': (24.462,-3.172,68.677)
O2': (23.161,-3.044,68.156)
N1: (26.586,-1.937,68.245)
N3: (28.252,-2.243,66.577)
N4: (30.456,-2.211,67.179)
C6: (27.535,-1.788,69.198)
C5: (28.820,-1.874,68.876)
O3': (23.380,-4.304,70.563)
OP1: (25.924,-3.621,74.227)
OP2: (28.103,-3.613,72.756)
C4: (29.176,-2.108,67.525)
O5': (26.197,-1.925,72.299)
C3': (24.427,-3.450,70.179)
C1': (25.152,-1.819,68.613)
O4': (25.062,-1.233,69.888)
C5': (24.774,-1.905,72.204)
P: (26.952,-2.843,73.403)
O2: (26.095,-2.299,66.053)
C4': (24.295,-2.073,70.777)
C2': (24.462,-3.172,68.677)
O2': (23.161,-3.044,68.156)
N1: (26.586,-1.937,68.245)
N3: (28.252,-2.243,66.577)
N4: (30.456,-2.211,67.179)
C6: (27.535,-1.788,69.198)
C5: (28.820,-1.874,68.876)
O3': (23.380,-4.304,70.563)
OP1: (29.992,-9.310,56.219)
OP2: (30.771,-7.270,57.498)
C3': (25.603,-7.223,58.508)
C1': (25.712,-7.752,60.791)
C5': (27.320,-9.040,57.790)
O4': (26.438,-8.722,60.055)
C8: (27.999,-6.897,61.228)
O2': (23.562,-7.622,59.781)
C6: (27.904,-4.345,63.665)
C5: (27.750,-5.383,62.708)
C4: (26.515,-5.877,62.444)
P: (29.909,-8.468,57.430)
C4': (26.125,-8.629,58.655)
C2': (24.845,-7.000,59.814)
C2: (25.663,-4.461,63.924)
N1: (26.818,-3.884,64.290)
N3: (25.415,-5.439,63.052)
N6: (29.071,-3.788,64.007)
N7: (28.663,-6.056,61.940)
N9: (26.675,-6.851,61.466)
O5': (28.360,-8.047,57.719)
O3': (24.798,-7.052,57.370)
OP2: (30.771,-7.270,57.498)
C3': (25.603,-7.223,58.508)
C1': (25.712,-7.752,60.791)
C5': (27.320,-9.040,57.790)
O4': (26.438,-8.722,60.055)
C8: (27.999,-6.897,61.228)
O2': (23.562,-7.622,59.781)
C6: (27.904,-4.345,63.665)
C5: (27.750,-5.383,62.708)
C4: (26.515,-5.877,62.444)
P: (29.909,-8.468,57.430)
C4': (26.125,-8.629,58.655)
C2': (24.845,-7.000,59.814)
C2: (25.663,-4.461,63.924)
N1: (26.818,-3.884,64.290)
N3: (25.415,-5.439,63.052)
N6: (29.071,-3.788,64.007)
N7: (28.663,-6.056,61.940)
N9: (26.675,-6.851,61.466)
O5': (28.360,-8.047,57.719)
O3': (24.798,-7.052,57.370)
Image (generated by PyMOL):