Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02050:02326
Extra
PDB:
ATOM 1 O3' A A2049 72.210 120.010 88.183 1.00 72.54 O
ATOM 2 P C A2050 72.480 118.613 88.919 1.00 60.20 P
ATOM 3 OP1 C A2050 73.919 118.325 88.700 1.00 61.15 O
ATOM 4 OP2 C A2050 71.463 117.646 88.437 1.00 59.79 O
ATOM 5 O5' C A2050 72.217 118.889 90.472 1.00 56.51 O
ATOM 6 C5' C A2050 73.308 119.055 91.410 1.00 50.43 C
ATOM 7 C4' C A2050 73.066 118.247 92.678 1.00 46.58 C
ATOM 8 O4' C A2050 71.837 118.674 93.326 1.00 47.76 O
ATOM 9 C3' C A2050 72.900 116.746 92.516 1.00 43.88 C
ATOM 10 O3' C A2050 74.151 116.097 92.496 1.00 43.73 O
ATOM 11 C2' C A2050 72.134 116.347 93.771 1.00 44.64 C
ATOM 12 O2' C A2050 72.961 116.178 94.899 1.00 39.62 O
ATOM 13 C1' C A2050 71.225 117.562 93.978 1.00 45.78 C
ATOM 14 N1 C A2050 69.845 117.382 93.457 1.00 44.59 N
ATOM 15 C2 C A2050 68.887 116.714 94.250 1.00 43.10 C
ATOM 16 O2 C A2050 69.211 116.292 95.367 1.00 43.48 O
ATOM 17 N3 C A2050 67.635 116.551 93.772 1.00 42.57 N
ATOM 18 C4 C A2050 67.316 117.020 92.563 1.00 42.98 C
ATOM 19 N4 C A2050 66.067 116.836 92.129 1.00 41.91 N
ATOM 20 C5 C A2050 68.262 117.700 91.742 1.00 43.27 C
ATOM 21 C6 C A2050 69.499 117.857 92.223 1.00 43.50 C
ATOM 22 P C A2051 74.334 114.756 91.644 1.00 46.65 P
ATOM 23 OP1 C A2051 75.650 114.168 92.012 1.00 47.38 O
ATOM 24 OP2 C A2051 74.051 115.070 90.227 1.00 47.15 O
ATOM 25 O5' C A2051 73.168 113.806 92.169 1.00 45.87 O
TER
ATOM 1 O3' U B2325 64.302 106.783 96.261 1.00 35.38 O
ATOM 2 P A B2326 63.998 106.801 97.837 1.00 34.01 P
ATOM 3 OP1 A B2326 63.773 105.397 98.252 1.00 32.33 O
ATOM 4 OP2 A B2326 62.963 107.817 98.114 1.00 32.65 O
ATOM 5 O5' A B2326 65.373 107.298 98.466 1.00 33.70 O
ATOM 6 C5' A B2326 66.508 106.414 98.549 1.00 34.00 C
ATOM 7 C4' A B2326 67.806 107.187 98.442 1.00 35.36 C
ATOM 8 O4' A B2326 68.007 107.654 97.085 1.00 35.62 O
ATOM 9 C3' A B2326 67.950 108.448 99.275 1.00 36.61 C
ATOM 10 O3' A B2326 68.275 108.184 100.627 1.00 38.95 O
ATOM 11 C2' A B2326 69.090 109.155 98.561 1.00 36.80 C
ATOM 12 O2' A B2326 70.353 108.587 98.839 1.00 38.88 O
ATOM 13 C1' A B2326 68.738 108.870 97.105 1.00 36.13 C
ATOM 14 N9 A B2326 67.895 109.931 96.562 1.00 35.59 N
ATOM 15 C8 A B2326 66.577 109.873 96.198 1.00 36.21 C
ATOM 16 N7 A B2326 66.104 111.006 95.751 1.00 36.72 N
ATOM 17 C5 A B2326 67.184 111.872 95.826 1.00 36.02 C
ATOM 18 C6 A B2326 67.340 113.223 95.482 1.00 35.40 C
ATOM 19 N6 A B2326 66.367 113.971 94.974 1.00 35.44 N
ATOM 20 N1 A B2326 68.549 113.787 95.675 1.00 37.12 N
ATOM 21 C2 A B2326 69.532 113.033 96.172 1.00 37.73 C
ATOM 22 N3 A B2326 69.512 111.750 96.525 1.00 38.24 N
ATOM 23 C4 A B2326 68.293 111.222 96.324 1.00 36.38 C
ATOM 24 P A B2327 67.993 109.308 101.738 1.00 40.42 P
ATOM 25 OP1 A B2327 68.517 108.775 103.023 1.00 38.82 O
ATOM 26 OP2 A B2327 66.572 109.720 101.644 1.00 39.10 O
ATOM 27 O5' A B2327 68.871 110.548 101.250 1.00 41.06 O
TER
ATOM 2 P C A2050 72.480 118.613 88.919 1.00 60.20 P
ATOM 3 OP1 C A2050 73.919 118.325 88.700 1.00 61.15 O
ATOM 4 OP2 C A2050 71.463 117.646 88.437 1.00 59.79 O
ATOM 5 O5' C A2050 72.217 118.889 90.472 1.00 56.51 O
ATOM 6 C5' C A2050 73.308 119.055 91.410 1.00 50.43 C
ATOM 7 C4' C A2050 73.066 118.247 92.678 1.00 46.58 C
ATOM 8 O4' C A2050 71.837 118.674 93.326 1.00 47.76 O
ATOM 9 C3' C A2050 72.900 116.746 92.516 1.00 43.88 C
ATOM 10 O3' C A2050 74.151 116.097 92.496 1.00 43.73 O
ATOM 11 C2' C A2050 72.134 116.347 93.771 1.00 44.64 C
ATOM 12 O2' C A2050 72.961 116.178 94.899 1.00 39.62 O
ATOM 13 C1' C A2050 71.225 117.562 93.978 1.00 45.78 C
ATOM 14 N1 C A2050 69.845 117.382 93.457 1.00 44.59 N
ATOM 15 C2 C A2050 68.887 116.714 94.250 1.00 43.10 C
ATOM 16 O2 C A2050 69.211 116.292 95.367 1.00 43.48 O
ATOM 17 N3 C A2050 67.635 116.551 93.772 1.00 42.57 N
ATOM 18 C4 C A2050 67.316 117.020 92.563 1.00 42.98 C
ATOM 19 N4 C A2050 66.067 116.836 92.129 1.00 41.91 N
ATOM 20 C5 C A2050 68.262 117.700 91.742 1.00 43.27 C
ATOM 21 C6 C A2050 69.499 117.857 92.223 1.00 43.50 C
ATOM 22 P C A2051 74.334 114.756 91.644 1.00 46.65 P
ATOM 23 OP1 C A2051 75.650 114.168 92.012 1.00 47.38 O
ATOM 24 OP2 C A2051 74.051 115.070 90.227 1.00 47.15 O
ATOM 25 O5' C A2051 73.168 113.806 92.169 1.00 45.87 O
TER
ATOM 1 O3' U B2325 64.302 106.783 96.261 1.00 35.38 O
ATOM 2 P A B2326 63.998 106.801 97.837 1.00 34.01 P
ATOM 3 OP1 A B2326 63.773 105.397 98.252 1.00 32.33 O
ATOM 4 OP2 A B2326 62.963 107.817 98.114 1.00 32.65 O
ATOM 5 O5' A B2326 65.373 107.298 98.466 1.00 33.70 O
ATOM 6 C5' A B2326 66.508 106.414 98.549 1.00 34.00 C
ATOM 7 C4' A B2326 67.806 107.187 98.442 1.00 35.36 C
ATOM 8 O4' A B2326 68.007 107.654 97.085 1.00 35.62 O
ATOM 9 C3' A B2326 67.950 108.448 99.275 1.00 36.61 C
ATOM 10 O3' A B2326 68.275 108.184 100.627 1.00 38.95 O
ATOM 11 C2' A B2326 69.090 109.155 98.561 1.00 36.80 C
ATOM 12 O2' A B2326 70.353 108.587 98.839 1.00 38.88 O
ATOM 13 C1' A B2326 68.738 108.870 97.105 1.00 36.13 C
ATOM 14 N9 A B2326 67.895 109.931 96.562 1.00 35.59 N
ATOM 15 C8 A B2326 66.577 109.873 96.198 1.00 36.21 C
ATOM 16 N7 A B2326 66.104 111.006 95.751 1.00 36.72 N
ATOM 17 C5 A B2326 67.184 111.872 95.826 1.00 36.02 C
ATOM 18 C6 A B2326 67.340 113.223 95.482 1.00 35.40 C
ATOM 19 N6 A B2326 66.367 113.971 94.974 1.00 35.44 N
ATOM 20 N1 A B2326 68.549 113.787 95.675 1.00 37.12 N
ATOM 21 C2 A B2326 69.532 113.033 96.172 1.00 37.73 C
ATOM 22 N3 A B2326 69.512 111.750 96.525 1.00 38.24 N
ATOM 23 C4 A B2326 68.293 111.222 96.324 1.00 36.38 C
ATOM 24 P A B2327 67.993 109.308 101.738 1.00 40.42 P
ATOM 25 OP1 A B2327 68.517 108.775 103.023 1.00 38.82 O
ATOM 26 OP2 A B2327 66.572 109.720 101.644 1.00 39.10 O
ATOM 27 O5' A B2327 68.871 110.548 101.250 1.00 41.06 O
TER
Atoms:
C2: (68.887,116.714,94.250)
OP1: (73.919,118.325,88.700)
OP2: (71.463,117.646,88.437)
C4: (67.316,117.020,92.563)
O5': (72.217,118.889,90.472)
C3': (72.900,116.746,92.516)
C1': (71.225,117.562,93.978)
O4': (71.837,118.674,93.326)
C5': (73.308,119.055,91.410)
P: (72.480,118.613,88.919)
O2: (69.211,116.292,95.367)
C4': (73.066,118.247,92.678)
C2': (72.134,116.347,93.771)
O2': (72.961,116.178,94.899)
N1: (69.845,117.382,93.457)
N3: (67.635,116.551,93.772)
N4: (66.067,116.836,92.129)
C6: (69.499,117.857,92.223)
C5: (68.262,117.700,91.742)
O3': (74.151,116.097,92.496)
OP1: (73.919,118.325,88.700)
OP2: (71.463,117.646,88.437)
C4: (67.316,117.020,92.563)
O5': (72.217,118.889,90.472)
C3': (72.900,116.746,92.516)
C1': (71.225,117.562,93.978)
O4': (71.837,118.674,93.326)
C5': (73.308,119.055,91.410)
P: (72.480,118.613,88.919)
O2: (69.211,116.292,95.367)
C4': (73.066,118.247,92.678)
C2': (72.134,116.347,93.771)
O2': (72.961,116.178,94.899)
N1: (69.845,117.382,93.457)
N3: (67.635,116.551,93.772)
N4: (66.067,116.836,92.129)
C6: (69.499,117.857,92.223)
C5: (68.262,117.700,91.742)
O3': (74.151,116.097,92.496)
OP1: (63.773,105.397,98.252)
OP2: (62.963,107.817,98.114)
C3': (67.950,108.448,99.275)
C1': (68.738,108.870,97.105)
C5': (66.508,106.414,98.549)
O4': (68.007,107.654,97.085)
C8: (66.577,109.873,96.198)
O2': (70.353,108.587,98.839)
C6: (67.340,113.223,95.482)
C5: (67.184,111.872,95.826)
C4: (68.293,111.222,96.324)
P: (63.998,106.801,97.837)
C4': (67.806,107.187,98.442)
C2': (69.090,109.155,98.561)
C2: (69.532,113.033,96.172)
N1: (68.549,113.787,95.675)
N3: (69.512,111.750,96.525)
N6: (66.367,113.971,94.974)
N7: (66.104,111.006,95.751)
N9: (67.895,109.931,96.562)
O5': (65.373,107.298,98.466)
O3': (68.275,108.184,100.627)
OP2: (62.963,107.817,98.114)
C3': (67.950,108.448,99.275)
C1': (68.738,108.870,97.105)
C5': (66.508,106.414,98.549)
O4': (68.007,107.654,97.085)
C8: (66.577,109.873,96.198)
O2': (70.353,108.587,98.839)
C6: (67.340,113.223,95.482)
C5: (67.184,111.872,95.826)
C4: (68.293,111.222,96.324)
P: (63.998,106.801,97.837)
C4': (67.806,107.187,98.442)
C2': (69.090,109.155,98.561)
C2: (69.532,113.033,96.172)
N1: (68.549,113.787,95.675)
N3: (69.512,111.750,96.525)
N6: (66.367,113.971,94.974)
N7: (66.104,111.006,95.751)
N9: (67.895,109.931,96.562)
O5': (65.373,107.298,98.466)
O3': (68.275,108.184,100.627)
Image (generated by PyMOL):