Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GER:A11:A29
Extra
PDB:
ATOM 1 O3' U A 10 24.219 11.364 1.833 1.00 25.54 O
ATOM 2 P C A 11 25.296 12.520 1.510 1.00 25.38 P
ATOM 3 OP1 C A 11 26.492 11.864 0.928 1.00 26.20 O
ATOM 4 OP2 C A 11 25.443 13.363 2.726 1.00 24.76 O
ATOM 5 O5' C A 11 24.614 13.418 0.378 1.00 25.47 O
ATOM 6 C5' C A 11 24.489 12.941 -0.962 1.00 25.74 C
ATOM 7 C4' C A 11 23.966 14.032 -1.881 1.00 25.61 C
ATOM 8 O4' C A 11 22.596 14.388 -1.539 1.00 26.23 O
ATOM 9 C3' C A 11 24.684 15.370 -1.847 1.00 25.64 C
ATOM 10 O3' C A 11 25.895 15.328 -2.583 1.00 25.11 O
ATOM 11 C2' C A 11 23.649 16.266 -2.512 1.00 25.70 C
ATOM 12 O2' C A 11 23.557 16.066 -3.910 1.00 26.47 O
ATOM 13 C1' C A 11 22.375 15.766 -1.834 1.00 26.16 C
ATOM 14 N1 C A 11 22.147 16.483 -0.571 1.00 26.34 N
ATOM 15 C2 C A 11 21.599 17.771 -0.618 1.00 26.63 C
ATOM 16 O2 C A 11 21.315 18.266 -1.722 1.00 25.85 O
ATOM 17 N3 C A 11 21.399 18.444 0.536 1.00 26.03 N
ATOM 18 C4 C A 11 21.731 17.886 1.702 1.00 25.60 C
ATOM 19 N4 C A 11 21.529 18.599 2.813 1.00 26.17 N
ATOM 20 C5 C A 11 22.287 16.576 1.780 1.00 26.52 C
ATOM 21 C6 C A 11 22.474 15.915 0.629 1.00 26.27 C
ATOM 22 P G A 12 27.124 16.262 -2.140 1.00 22.92 P
ATOM 23 OP1 G A 12 28.250 15.960 -3.055 1.00 23.56 O
ATOM 24 OP2 G A 12 27.307 16.125 -0.673 1.00 24.42 O
ATOM 25 O5' G A 12 26.603 17.739 -2.430 1.00 22.78 O
TER
ATOM 1 O3' C B 28 17.506 29.777 3.763 1.00 28.51 O
ATOM 2 P A B 29 16.203 28.891 3.447 1.00 30.35 P
ATOM 3 OP1 A B 29 15.119 29.824 3.035 1.00 31.28 O
ATOM 4 OP2 A B 29 15.981 27.966 4.583 1.00 30.17 O
ATOM 5 O5' A B 29 16.623 28.014 2.183 1.00 30.88 O
ATOM 6 C5' A B 29 16.928 28.631 0.935 1.00 32.93 C
ATOM 7 C4' A B 29 17.528 27.623 -0.023 1.00 33.68 C
ATOM 8 O4' A B 29 18.825 27.182 0.470 1.00 32.80 O
ATOM 9 C3' A B 29 16.764 26.323 -0.222 1.00 34.56 C
ATOM 10 O3' A B 29 15.710 26.476 -1.167 1.00 37.22 O
ATOM 11 C2' A B 29 17.858 25.429 -0.784 1.00 33.27 C
ATOM 12 O2' A B 29 18.171 25.746 -2.124 1.00 32.99 O
ATOM 13 C1' A B 29 19.033 25.823 0.111 1.00 32.17 C
ATOM 14 N9 A B 29 19.075 25.028 1.334 1.00 30.43 N
ATOM 15 C8 A B 29 18.648 25.391 2.588 1.00 30.50 C
ATOM 16 N7 A B 29 18.801 24.453 3.489 1.00 29.12 N
ATOM 17 C5 A B 29 19.372 23.403 2.784 1.00 29.04 C
ATOM 18 C6 A B 29 19.777 22.116 3.172 1.00 28.43 C
ATOM 19 N6 A B 29 19.668 21.652 4.419 1.00 28.61 N
ATOM 20 N1 A B 29 20.306 21.312 2.222 1.00 28.63 N
ATOM 21 C2 A B 29 20.416 21.781 0.975 1.00 28.67 C
ATOM 22 N3 A B 29 20.073 22.972 0.488 1.00 29.09 N
ATOM 23 C4 A B 29 19.549 23.745 1.456 1.00 29.87 C
ATOM 24 P A B 30 14.437 25.496 -1.103 1.00 38.51 P
ATOM 25 OP1 A B 30 13.503 25.919 -2.181 1.00 39.55 O
ATOM 26 OP2 A B 30 13.962 25.451 0.301 1.00 38.48 O
ATOM 27 O5' A B 30 15.019 24.057 -1.474 1.00 37.08 O
TER
ATOM 2 P C A 11 25.296 12.520 1.510 1.00 25.38 P
ATOM 3 OP1 C A 11 26.492 11.864 0.928 1.00 26.20 O
ATOM 4 OP2 C A 11 25.443 13.363 2.726 1.00 24.76 O
ATOM 5 O5' C A 11 24.614 13.418 0.378 1.00 25.47 O
ATOM 6 C5' C A 11 24.489 12.941 -0.962 1.00 25.74 C
ATOM 7 C4' C A 11 23.966 14.032 -1.881 1.00 25.61 C
ATOM 8 O4' C A 11 22.596 14.388 -1.539 1.00 26.23 O
ATOM 9 C3' C A 11 24.684 15.370 -1.847 1.00 25.64 C
ATOM 10 O3' C A 11 25.895 15.328 -2.583 1.00 25.11 O
ATOM 11 C2' C A 11 23.649 16.266 -2.512 1.00 25.70 C
ATOM 12 O2' C A 11 23.557 16.066 -3.910 1.00 26.47 O
ATOM 13 C1' C A 11 22.375 15.766 -1.834 1.00 26.16 C
ATOM 14 N1 C A 11 22.147 16.483 -0.571 1.00 26.34 N
ATOM 15 C2 C A 11 21.599 17.771 -0.618 1.00 26.63 C
ATOM 16 O2 C A 11 21.315 18.266 -1.722 1.00 25.85 O
ATOM 17 N3 C A 11 21.399 18.444 0.536 1.00 26.03 N
ATOM 18 C4 C A 11 21.731 17.886 1.702 1.00 25.60 C
ATOM 19 N4 C A 11 21.529 18.599 2.813 1.00 26.17 N
ATOM 20 C5 C A 11 22.287 16.576 1.780 1.00 26.52 C
ATOM 21 C6 C A 11 22.474 15.915 0.629 1.00 26.27 C
ATOM 22 P G A 12 27.124 16.262 -2.140 1.00 22.92 P
ATOM 23 OP1 G A 12 28.250 15.960 -3.055 1.00 23.56 O
ATOM 24 OP2 G A 12 27.307 16.125 -0.673 1.00 24.42 O
ATOM 25 O5' G A 12 26.603 17.739 -2.430 1.00 22.78 O
TER
ATOM 1 O3' C B 28 17.506 29.777 3.763 1.00 28.51 O
ATOM 2 P A B 29 16.203 28.891 3.447 1.00 30.35 P
ATOM 3 OP1 A B 29 15.119 29.824 3.035 1.00 31.28 O
ATOM 4 OP2 A B 29 15.981 27.966 4.583 1.00 30.17 O
ATOM 5 O5' A B 29 16.623 28.014 2.183 1.00 30.88 O
ATOM 6 C5' A B 29 16.928 28.631 0.935 1.00 32.93 C
ATOM 7 C4' A B 29 17.528 27.623 -0.023 1.00 33.68 C
ATOM 8 O4' A B 29 18.825 27.182 0.470 1.00 32.80 O
ATOM 9 C3' A B 29 16.764 26.323 -0.222 1.00 34.56 C
ATOM 10 O3' A B 29 15.710 26.476 -1.167 1.00 37.22 O
ATOM 11 C2' A B 29 17.858 25.429 -0.784 1.00 33.27 C
ATOM 12 O2' A B 29 18.171 25.746 -2.124 1.00 32.99 O
ATOM 13 C1' A B 29 19.033 25.823 0.111 1.00 32.17 C
ATOM 14 N9 A B 29 19.075 25.028 1.334 1.00 30.43 N
ATOM 15 C8 A B 29 18.648 25.391 2.588 1.00 30.50 C
ATOM 16 N7 A B 29 18.801 24.453 3.489 1.00 29.12 N
ATOM 17 C5 A B 29 19.372 23.403 2.784 1.00 29.04 C
ATOM 18 C6 A B 29 19.777 22.116 3.172 1.00 28.43 C
ATOM 19 N6 A B 29 19.668 21.652 4.419 1.00 28.61 N
ATOM 20 N1 A B 29 20.306 21.312 2.222 1.00 28.63 N
ATOM 21 C2 A B 29 20.416 21.781 0.975 1.00 28.67 C
ATOM 22 N3 A B 29 20.073 22.972 0.488 1.00 29.09 N
ATOM 23 C4 A B 29 19.549 23.745 1.456 1.00 29.87 C
ATOM 24 P A B 30 14.437 25.496 -1.103 1.00 38.51 P
ATOM 25 OP1 A B 30 13.503 25.919 -2.181 1.00 39.55 O
ATOM 26 OP2 A B 30 13.962 25.451 0.301 1.00 38.48 O
ATOM 27 O5' A B 30 15.019 24.057 -1.474 1.00 37.08 O
TER
Atoms:
C2: (21.599,17.771,-0.618)
OP1: (26.492,11.864,0.928)
OP2: (25.443,13.363,2.726)
C4: (21.731,17.886,1.702)
O5': (24.614,13.418,0.378)
C3': (24.684,15.370,-1.847)
C1': (22.375,15.766,-1.834)
O4': (22.596,14.388,-1.539)
C5': (24.489,12.941,-0.962)
P: (25.296,12.520,1.510)
O2: (21.315,18.266,-1.722)
C4': (23.966,14.032,-1.881)
C2': (23.649,16.266,-2.512)
O2': (23.557,16.066,-3.910)
N1: (22.147,16.483,-0.571)
N3: (21.399,18.444,0.536)
N4: (21.529,18.599,2.813)
C6: (22.474,15.915,0.629)
C5: (22.287,16.576,1.780)
O3': (25.895,15.328,-2.583)
OP1: (26.492,11.864,0.928)
OP2: (25.443,13.363,2.726)
C4: (21.731,17.886,1.702)
O5': (24.614,13.418,0.378)
C3': (24.684,15.370,-1.847)
C1': (22.375,15.766,-1.834)
O4': (22.596,14.388,-1.539)
C5': (24.489,12.941,-0.962)
P: (25.296,12.520,1.510)
O2: (21.315,18.266,-1.722)
C4': (23.966,14.032,-1.881)
C2': (23.649,16.266,-2.512)
O2': (23.557,16.066,-3.910)
N1: (22.147,16.483,-0.571)
N3: (21.399,18.444,0.536)
N4: (21.529,18.599,2.813)
C6: (22.474,15.915,0.629)
C5: (22.287,16.576,1.780)
O3': (25.895,15.328,-2.583)
OP1: (15.119,29.824,3.035)
OP2: (15.981,27.966,4.583)
C3': (16.764,26.323,-0.222)
C1': (19.033,25.823,0.111)
C5': (16.928,28.631,0.935)
O4': (18.825,27.182,0.470)
C8: (18.648,25.391,2.588)
O2': (18.171,25.746,-2.124)
C6: (19.777,22.116,3.172)
C5: (19.372,23.403,2.784)
C4: (19.549,23.745,1.456)
P: (16.203,28.891,3.447)
C4': (17.528,27.623,-0.023)
C2': (17.858,25.429,-0.784)
C2: (20.416,21.781,0.975)
N1: (20.306,21.312,2.222)
N3: (20.073,22.972,0.488)
N6: (19.668,21.652,4.419)
N7: (18.801,24.453,3.489)
N9: (19.075,25.028,1.334)
O5': (16.623,28.014,2.183)
O3': (15.710,26.476,-1.167)
OP2: (15.981,27.966,4.583)
C3': (16.764,26.323,-0.222)
C1': (19.033,25.823,0.111)
C5': (16.928,28.631,0.935)
O4': (18.825,27.182,0.470)
C8: (18.648,25.391,2.588)
O2': (18.171,25.746,-2.124)
C6: (19.777,22.116,3.172)
C5: (19.372,23.403,2.784)
C4: (19.549,23.745,1.456)
P: (16.203,28.891,3.447)
C4': (17.528,27.623,-0.023)
C2': (17.858,25.429,-0.784)
C2: (20.416,21.781,0.975)
N1: (20.306,21.312,2.222)
N3: (20.073,22.972,0.488)
N6: (19.668,21.652,4.419)
N7: (18.801,24.453,3.489)
N9: (19.075,25.028,1.334)
O5': (16.623,28.014,2.183)
O3': (15.710,26.476,-1.167)
Image (generated by PyMOL):