Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KFU:M12:M20
Extra
PDB:
ATOM 1 O3' U A 11 -18.198 -18.282 105.572 1.00 43.69 O
ATOM 2 P C A 12 -16.778 -18.944 105.917 1.00 93.50 P
ATOM 3 OP1 C A 12 -16.479 -18.626 107.335 1.00107.12 O
ATOM 4 OP2 C A 12 -15.821 -18.501 104.871 1.00 38.50 O
ATOM 5 O5' C A 12 -17.084 -20.499 105.759 1.00 75.67 O
ATOM 6 C5' C A 12 -16.085 -21.405 105.310 1.00 57.05 C
ATOM 7 C4' C A 12 -16.584 -22.828 105.318 1.00 98.69 C
ATOM 8 O4' C A 12 -17.586 -22.992 104.274 1.00 63.33 O
ATOM 9 C3' C A 12 -15.517 -23.883 105.053 1.00 99.60 C
ATOM 10 O3' C A 12 -15.826 -25.067 105.780 1.00 64.02 O
ATOM 11 C2' C A 12 -15.673 -24.147 103.563 1.00141.95 C
ATOM 12 O2' C A 12 -15.199 -25.404 103.134 1.00162.01 O
ATOM 13 C1' C A 12 -17.183 -24.017 103.386 1.00 76.41 C
ATOM 14 N1 C A 12 -17.582 -23.633 102.019 1.00 79.77 N
ATOM 15 C2 C A 12 -18.564 -24.363 101.353 1.00 68.08 C
ATOM 16 O2 C A 12 -19.112 -25.308 101.937 1.00 87.65 O
ATOM 17 N3 C A 12 -18.894 -24.006 100.091 1.00 83.66 N
ATOM 18 C4 C A 12 -18.280 -22.980 99.499 1.00 78.92 C
ATOM 19 N4 C A 12 -18.636 -22.660 98.254 1.00 89.98 N
ATOM 20 C5 C A 12 -17.268 -22.229 100.154 1.00110.36 C
ATOM 21 C6 C A 12 -16.950 -22.594 101.399 1.00126.73 C
ATOM 22 P A A 13 -14.663 -26.108 106.140 1.00119.94 P
ATOM 23 OP1 A A 13 -14.505 -26.094 107.615 1.00144.66 O
ATOM 24 OP2 A A 13 -13.495 -25.760 105.294 1.00 67.69 O
ATOM 25 O5' A A 13 -15.279 -27.500 105.671 1.00128.38 O
TER
ATOM 1 O3' G B 19 -24.288 -32.655 96.585 1.00104.42 O
ATOM 2 P A B 20 -25.825 -32.249 96.832 1.00168.29 P
ATOM 3 OP1 A B 20 -26.537 -33.478 97.259 1.00179.92 O
ATOM 4 OP2 A B 20 -26.294 -31.539 95.616 1.00168.63 O
ATOM 5 O5' A B 20 -25.729 -31.229 98.051 1.00188.29 O
ATOM 6 C5' A B 20 -25.476 -31.695 99.372 1.00184.52 C
ATOM 7 C4' A B 20 -25.928 -30.701 100.414 1.00135.17 C
ATOM 8 O4' A B 20 -24.894 -29.693 100.596 1.00 84.16 O
ATOM 9 C3' A B 20 -27.213 -29.944 100.081 1.00110.94 C
ATOM 10 O3' A B 20 -27.950 -29.715 101.282 1.00126.59 O
ATOM 11 C2' A B 20 -26.686 -28.619 99.537 1.00132.89 C
ATOM 12 O2' A B 20 -27.584 -27.534 99.637 1.00157.26 O
ATOM 13 C1' A B 20 -25.443 -28.406 100.395 1.00 81.11 C
ATOM 14 N9 A B 20 -24.427 -27.566 99.758 1.00 69.93 N
ATOM 15 C8 A B 20 -23.992 -27.636 98.458 1.00 93.33 C
ATOM 16 N7 A B 20 -23.083 -26.745 98.153 1.00104.47 N
ATOM 17 C5 A B 20 -22.916 -26.037 99.332 1.00 98.60 C
ATOM 18 C6 A B 20 -22.085 -24.959 99.661 1.00 63.70 C
ATOM 19 N6 A B 20 -21.247 -24.394 98.792 1.00107.30 N
ATOM 20 N1 A B 20 -22.153 -24.479 100.922 1.00 50.61 N
ATOM 21 C2 A B 20 -23.003 -25.054 101.783 1.00101.43 C
ATOM 22 N3 A B 20 -23.835 -26.074 101.591 1.00 97.43 N
ATOM 23 C4 A B 20 -23.739 -26.526 100.329 1.00 84.54 C
ATOM 24 P G B 21 -29.312 -28.860 101.254 1.00149.12 P
ATOM 25 OP1 G B 21 -30.285 -29.556 102.131 1.00157.28 O
ATOM 26 OP2 G B 21 -29.668 -28.638 99.830 1.00 57.12 O
ATOM 27 O5' G B 21 -28.870 -27.487 101.919 1.00 77.50 O
TER
ATOM 2 P C A 12 -16.778 -18.944 105.917 1.00 93.50 P
ATOM 3 OP1 C A 12 -16.479 -18.626 107.335 1.00107.12 O
ATOM 4 OP2 C A 12 -15.821 -18.501 104.871 1.00 38.50 O
ATOM 5 O5' C A 12 -17.084 -20.499 105.759 1.00 75.67 O
ATOM 6 C5' C A 12 -16.085 -21.405 105.310 1.00 57.05 C
ATOM 7 C4' C A 12 -16.584 -22.828 105.318 1.00 98.69 C
ATOM 8 O4' C A 12 -17.586 -22.992 104.274 1.00 63.33 O
ATOM 9 C3' C A 12 -15.517 -23.883 105.053 1.00 99.60 C
ATOM 10 O3' C A 12 -15.826 -25.067 105.780 1.00 64.02 O
ATOM 11 C2' C A 12 -15.673 -24.147 103.563 1.00141.95 C
ATOM 12 O2' C A 12 -15.199 -25.404 103.134 1.00162.01 O
ATOM 13 C1' C A 12 -17.183 -24.017 103.386 1.00 76.41 C
ATOM 14 N1 C A 12 -17.582 -23.633 102.019 1.00 79.77 N
ATOM 15 C2 C A 12 -18.564 -24.363 101.353 1.00 68.08 C
ATOM 16 O2 C A 12 -19.112 -25.308 101.937 1.00 87.65 O
ATOM 17 N3 C A 12 -18.894 -24.006 100.091 1.00 83.66 N
ATOM 18 C4 C A 12 -18.280 -22.980 99.499 1.00 78.92 C
ATOM 19 N4 C A 12 -18.636 -22.660 98.254 1.00 89.98 N
ATOM 20 C5 C A 12 -17.268 -22.229 100.154 1.00110.36 C
ATOM 21 C6 C A 12 -16.950 -22.594 101.399 1.00126.73 C
ATOM 22 P A A 13 -14.663 -26.108 106.140 1.00119.94 P
ATOM 23 OP1 A A 13 -14.505 -26.094 107.615 1.00144.66 O
ATOM 24 OP2 A A 13 -13.495 -25.760 105.294 1.00 67.69 O
ATOM 25 O5' A A 13 -15.279 -27.500 105.671 1.00128.38 O
TER
ATOM 1 O3' G B 19 -24.288 -32.655 96.585 1.00104.42 O
ATOM 2 P A B 20 -25.825 -32.249 96.832 1.00168.29 P
ATOM 3 OP1 A B 20 -26.537 -33.478 97.259 1.00179.92 O
ATOM 4 OP2 A B 20 -26.294 -31.539 95.616 1.00168.63 O
ATOM 5 O5' A B 20 -25.729 -31.229 98.051 1.00188.29 O
ATOM 6 C5' A B 20 -25.476 -31.695 99.372 1.00184.52 C
ATOM 7 C4' A B 20 -25.928 -30.701 100.414 1.00135.17 C
ATOM 8 O4' A B 20 -24.894 -29.693 100.596 1.00 84.16 O
ATOM 9 C3' A B 20 -27.213 -29.944 100.081 1.00110.94 C
ATOM 10 O3' A B 20 -27.950 -29.715 101.282 1.00126.59 O
ATOM 11 C2' A B 20 -26.686 -28.619 99.537 1.00132.89 C
ATOM 12 O2' A B 20 -27.584 -27.534 99.637 1.00157.26 O
ATOM 13 C1' A B 20 -25.443 -28.406 100.395 1.00 81.11 C
ATOM 14 N9 A B 20 -24.427 -27.566 99.758 1.00 69.93 N
ATOM 15 C8 A B 20 -23.992 -27.636 98.458 1.00 93.33 C
ATOM 16 N7 A B 20 -23.083 -26.745 98.153 1.00104.47 N
ATOM 17 C5 A B 20 -22.916 -26.037 99.332 1.00 98.60 C
ATOM 18 C6 A B 20 -22.085 -24.959 99.661 1.00 63.70 C
ATOM 19 N6 A B 20 -21.247 -24.394 98.792 1.00107.30 N
ATOM 20 N1 A B 20 -22.153 -24.479 100.922 1.00 50.61 N
ATOM 21 C2 A B 20 -23.003 -25.054 101.783 1.00101.43 C
ATOM 22 N3 A B 20 -23.835 -26.074 101.591 1.00 97.43 N
ATOM 23 C4 A B 20 -23.739 -26.526 100.329 1.00 84.54 C
ATOM 24 P G B 21 -29.312 -28.860 101.254 1.00149.12 P
ATOM 25 OP1 G B 21 -30.285 -29.556 102.131 1.00157.28 O
ATOM 26 OP2 G B 21 -29.668 -28.638 99.830 1.00 57.12 O
ATOM 27 O5' G B 21 -28.870 -27.487 101.919 1.00 77.50 O
TER
Atoms:
C2: (-18.564,-24.363,101.353)
OP1: (-16.479,-18.626,107.335)
OP2: (-15.821,-18.501,104.871)
C4: (-18.280,-22.980,99.499)
O5': (-17.084,-20.499,105.759)
C3': (-15.517,-23.883,105.053)
C1': (-17.183,-24.017,103.386)
O4': (-17.586,-22.992,104.274)
C5': (-16.085,-21.405,105.310)
P: (-16.778,-18.944,105.917)
O2: (-19.112,-25.308,101.937)
C4': (-16.584,-22.828,105.318)
C2': (-15.673,-24.147,103.563)
O2': (-15.199,-25.404,103.134)
N1: (-17.582,-23.633,102.019)
N3: (-18.894,-24.006,100.091)
N4: (-18.636,-22.660,98.254)
C6: (-16.950,-22.594,101.399)
C5: (-17.268,-22.229,100.154)
O3': (-15.826,-25.067,105.780)
OP1: (-16.479,-18.626,107.335)
OP2: (-15.821,-18.501,104.871)
C4: (-18.280,-22.980,99.499)
O5': (-17.084,-20.499,105.759)
C3': (-15.517,-23.883,105.053)
C1': (-17.183,-24.017,103.386)
O4': (-17.586,-22.992,104.274)
C5': (-16.085,-21.405,105.310)
P: (-16.778,-18.944,105.917)
O2: (-19.112,-25.308,101.937)
C4': (-16.584,-22.828,105.318)
C2': (-15.673,-24.147,103.563)
O2': (-15.199,-25.404,103.134)
N1: (-17.582,-23.633,102.019)
N3: (-18.894,-24.006,100.091)
N4: (-18.636,-22.660,98.254)
C6: (-16.950,-22.594,101.399)
C5: (-17.268,-22.229,100.154)
O3': (-15.826,-25.067,105.780)
OP1: (-26.537,-33.478,97.259)
OP2: (-26.294,-31.539,95.616)
C3': (-27.213,-29.944,100.081)
C1': (-25.443,-28.406,100.395)
C5': (-25.476,-31.695,99.372)
O4': (-24.894,-29.693,100.596)
C8: (-23.992,-27.636,98.458)
O2': (-27.584,-27.534,99.637)
C6: (-22.085,-24.959,99.661)
C5: (-22.916,-26.037,99.332)
C4: (-23.739,-26.526,100.329)
P: (-25.825,-32.249,96.832)
C4': (-25.928,-30.701,100.414)
C2': (-26.686,-28.619,99.537)
C2: (-23.003,-25.054,101.783)
N1: (-22.153,-24.479,100.922)
N3: (-23.835,-26.074,101.591)
N6: (-21.247,-24.394,98.792)
N7: (-23.083,-26.745,98.153)
N9: (-24.427,-27.566,99.758)
O5': (-25.729,-31.229,98.051)
O3': (-27.950,-29.715,101.282)
OP2: (-26.294,-31.539,95.616)
C3': (-27.213,-29.944,100.081)
C1': (-25.443,-28.406,100.395)
C5': (-25.476,-31.695,99.372)
O4': (-24.894,-29.693,100.596)
C8: (-23.992,-27.636,98.458)
O2': (-27.584,-27.534,99.637)
C6: (-22.085,-24.959,99.661)
C5: (-22.916,-26.037,99.332)
C4: (-23.739,-26.526,100.329)
P: (-25.825,-32.249,96.832)
C4': (-25.928,-30.701,100.414)
C2': (-26.686,-28.619,99.537)
C2: (-23.003,-25.054,101.783)
N1: (-22.153,-24.479,100.922)
N3: (-23.835,-26.074,101.591)
N6: (-21.247,-24.394,98.792)
N7: (-23.083,-26.745,98.153)
N9: (-24.427,-27.566,99.758)
O5': (-25.729,-31.229,98.051)
O3': (-27.950,-29.715,101.282)
Image (generated by PyMOL):