Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0478:0490
Extra
PDB:
ATOM 1 O3' A A 477 22.513 174.585 57.100 1.00 64.58 O
ATOM 2 P C A 478 22.977 175.435 58.374 1.00 66.45 P
ATOM 3 OP1 C A 478 23.581 176.694 57.861 1.00 65.92 O
ATOM 4 OP2 C A 478 23.778 174.537 59.245 1.00 66.99 O
ATOM 5 O5' C A 478 21.613 175.778 59.122 1.00 64.11 O
ATOM 6 C5' C A 478 20.612 176.595 58.494 1.00 61.00 C
ATOM 7 C4' C A 478 19.396 176.707 59.381 1.00 59.27 C
ATOM 8 O4' C A 478 18.684 175.446 59.426 1.00 57.33 O
ATOM 9 C3' C A 478 19.687 177.027 60.833 1.00 58.79 C
ATOM 10 O3' C A 478 19.907 178.417 61.012 1.00 60.58 O
ATOM 11 C2' C A 478 18.432 176.523 61.532 1.00 58.40 C
ATOM 12 O2' C A 478 17.344 177.416 61.438 1.00 56.90 O
ATOM 13 C1' C A 478 18.124 175.264 60.717 1.00 58.26 C
ATOM 14 N1 C A 478 18.694 174.038 61.301 1.00 60.20 N
ATOM 15 C2 C A 478 17.958 173.332 62.268 1.00 61.31 C
ATOM 16 O2 C A 478 16.843 173.756 62.620 1.00 61.70 O
ATOM 17 N3 C A 478 18.482 172.203 62.794 1.00 62.68 N
ATOM 18 C4 C A 478 19.681 171.771 62.396 1.00 62.71 C
ATOM 19 N4 C A 478 20.150 170.644 62.934 1.00 63.00 N
ATOM 20 C5 C A 478 20.450 172.472 61.425 1.00 62.42 C
ATOM 21 C6 C A 478 19.925 173.587 60.909 1.00 61.83 C
ATOM 22 P C A 479 20.925 178.921 62.142 1.00 61.38 P
ATOM 23 OP1 C A 479 21.099 180.390 62.007 1.00 61.56 O
ATOM 24 OP2 C A 479 22.116 178.033 62.079 1.00 60.66 O
ATOM 25 O5' C A 479 20.122 178.667 63.491 1.00 58.98 O
TER
ATOM 1 O3' G B 489 17.353 166.566 73.628 1.00 52.21 O
ATOM 2 P A B 490 16.524 165.731 72.536 1.00 52.53 P
ATOM 3 OP1 A B 490 15.394 165.058 73.230 1.00 52.35 O
ATOM 4 OP2 A B 490 17.491 164.918 71.759 1.00 53.46 O
ATOM 5 O5' A B 490 15.937 166.856 71.572 1.00 54.06 O
ATOM 6 C5' A B 490 14.916 167.765 72.038 1.00 55.69 C
ATOM 7 C4' A B 490 14.676 168.867 71.028 1.00 56.89 C
ATOM 8 O4' A B 490 15.906 169.619 70.839 1.00 55.37 O
ATOM 9 C3' A B 490 14.292 168.444 69.616 1.00 58.00 C
ATOM 10 O3' A B 490 12.916 168.113 69.463 1.00 59.99 O
ATOM 11 C2' A B 490 14.669 169.680 68.819 1.00 58.01 C
ATOM 12 O2' A B 490 13.729 170.728 68.953 1.00 57.30 O
ATOM 13 C1' A B 490 15.990 170.058 69.492 1.00 57.16 C
ATOM 14 N9 A B 490 17.088 169.342 68.844 1.00 56.98 N
ATOM 15 C8 A B 490 17.694 168.171 69.226 1.00 57.79 C
ATOM 16 N7 A B 490 18.612 167.755 68.390 1.00 57.29 N
ATOM 17 C5 A B 490 18.620 168.724 67.400 1.00 57.09 C
ATOM 18 C6 A B 490 19.367 168.863 66.221 1.00 58.05 C
ATOM 19 N6 A B 490 20.293 167.988 65.822 1.00 58.92 N
ATOM 20 N1 A B 490 19.127 169.945 65.452 1.00 57.95 N
ATOM 21 C2 A B 490 18.198 170.821 65.851 1.00 58.02 C
ATOM 22 N3 A B 490 17.433 170.800 66.936 1.00 57.25 N
ATOM 23 C4 A B 490 17.696 169.712 67.674 1.00 56.85 C
ATOM 24 P G B 491 12.489 166.912 68.475 1.00 62.13 P
ATOM 25 OP1 G B 491 11.004 166.834 68.493 1.00 62.40 O
ATOM 26 OP2 G B 491 13.289 165.710 68.825 1.00 62.21 O
ATOM 27 O5' G B 491 12.953 167.388 67.027 1.00 60.94 O
TER
ATOM 2 P C A 478 22.977 175.435 58.374 1.00 66.45 P
ATOM 3 OP1 C A 478 23.581 176.694 57.861 1.00 65.92 O
ATOM 4 OP2 C A 478 23.778 174.537 59.245 1.00 66.99 O
ATOM 5 O5' C A 478 21.613 175.778 59.122 1.00 64.11 O
ATOM 6 C5' C A 478 20.612 176.595 58.494 1.00 61.00 C
ATOM 7 C4' C A 478 19.396 176.707 59.381 1.00 59.27 C
ATOM 8 O4' C A 478 18.684 175.446 59.426 1.00 57.33 O
ATOM 9 C3' C A 478 19.687 177.027 60.833 1.00 58.79 C
ATOM 10 O3' C A 478 19.907 178.417 61.012 1.00 60.58 O
ATOM 11 C2' C A 478 18.432 176.523 61.532 1.00 58.40 C
ATOM 12 O2' C A 478 17.344 177.416 61.438 1.00 56.90 O
ATOM 13 C1' C A 478 18.124 175.264 60.717 1.00 58.26 C
ATOM 14 N1 C A 478 18.694 174.038 61.301 1.00 60.20 N
ATOM 15 C2 C A 478 17.958 173.332 62.268 1.00 61.31 C
ATOM 16 O2 C A 478 16.843 173.756 62.620 1.00 61.70 O
ATOM 17 N3 C A 478 18.482 172.203 62.794 1.00 62.68 N
ATOM 18 C4 C A 478 19.681 171.771 62.396 1.00 62.71 C
ATOM 19 N4 C A 478 20.150 170.644 62.934 1.00 63.00 N
ATOM 20 C5 C A 478 20.450 172.472 61.425 1.00 62.42 C
ATOM 21 C6 C A 478 19.925 173.587 60.909 1.00 61.83 C
ATOM 22 P C A 479 20.925 178.921 62.142 1.00 61.38 P
ATOM 23 OP1 C A 479 21.099 180.390 62.007 1.00 61.56 O
ATOM 24 OP2 C A 479 22.116 178.033 62.079 1.00 60.66 O
ATOM 25 O5' C A 479 20.122 178.667 63.491 1.00 58.98 O
TER
ATOM 1 O3' G B 489 17.353 166.566 73.628 1.00 52.21 O
ATOM 2 P A B 490 16.524 165.731 72.536 1.00 52.53 P
ATOM 3 OP1 A B 490 15.394 165.058 73.230 1.00 52.35 O
ATOM 4 OP2 A B 490 17.491 164.918 71.759 1.00 53.46 O
ATOM 5 O5' A B 490 15.937 166.856 71.572 1.00 54.06 O
ATOM 6 C5' A B 490 14.916 167.765 72.038 1.00 55.69 C
ATOM 7 C4' A B 490 14.676 168.867 71.028 1.00 56.89 C
ATOM 8 O4' A B 490 15.906 169.619 70.839 1.00 55.37 O
ATOM 9 C3' A B 490 14.292 168.444 69.616 1.00 58.00 C
ATOM 10 O3' A B 490 12.916 168.113 69.463 1.00 59.99 O
ATOM 11 C2' A B 490 14.669 169.680 68.819 1.00 58.01 C
ATOM 12 O2' A B 490 13.729 170.728 68.953 1.00 57.30 O
ATOM 13 C1' A B 490 15.990 170.058 69.492 1.00 57.16 C
ATOM 14 N9 A B 490 17.088 169.342 68.844 1.00 56.98 N
ATOM 15 C8 A B 490 17.694 168.171 69.226 1.00 57.79 C
ATOM 16 N7 A B 490 18.612 167.755 68.390 1.00 57.29 N
ATOM 17 C5 A B 490 18.620 168.724 67.400 1.00 57.09 C
ATOM 18 C6 A B 490 19.367 168.863 66.221 1.00 58.05 C
ATOM 19 N6 A B 490 20.293 167.988 65.822 1.00 58.92 N
ATOM 20 N1 A B 490 19.127 169.945 65.452 1.00 57.95 N
ATOM 21 C2 A B 490 18.198 170.821 65.851 1.00 58.02 C
ATOM 22 N3 A B 490 17.433 170.800 66.936 1.00 57.25 N
ATOM 23 C4 A B 490 17.696 169.712 67.674 1.00 56.85 C
ATOM 24 P G B 491 12.489 166.912 68.475 1.00 62.13 P
ATOM 25 OP1 G B 491 11.004 166.834 68.493 1.00 62.40 O
ATOM 26 OP2 G B 491 13.289 165.710 68.825 1.00 62.21 O
ATOM 27 O5' G B 491 12.953 167.388 67.027 1.00 60.94 O
TER
Atoms:
C2: (17.958,173.332,62.268)
OP1: (23.581,176.694,57.861)
OP2: (23.778,174.537,59.245)
C4: (19.681,171.771,62.396)
O5': (21.613,175.778,59.122)
C3': (19.687,177.027,60.833)
C1': (18.124,175.264,60.717)
O4': (18.684,175.446,59.426)
C5': (20.612,176.595,58.494)
P: (22.977,175.435,58.374)
O2: (16.843,173.756,62.620)
C4': (19.396,176.707,59.381)
C2': (18.432,176.523,61.532)
O2': (17.344,177.416,61.438)
N1: (18.694,174.038,61.301)
N3: (18.482,172.203,62.794)
N4: (20.150,170.644,62.934)
C6: (19.925,173.587,60.909)
C5: (20.450,172.472,61.425)
O3': (19.907,178.417,61.012)
OP1: (23.581,176.694,57.861)
OP2: (23.778,174.537,59.245)
C4: (19.681,171.771,62.396)
O5': (21.613,175.778,59.122)
C3': (19.687,177.027,60.833)
C1': (18.124,175.264,60.717)
O4': (18.684,175.446,59.426)
C5': (20.612,176.595,58.494)
P: (22.977,175.435,58.374)
O2: (16.843,173.756,62.620)
C4': (19.396,176.707,59.381)
C2': (18.432,176.523,61.532)
O2': (17.344,177.416,61.438)
N1: (18.694,174.038,61.301)
N3: (18.482,172.203,62.794)
N4: (20.150,170.644,62.934)
C6: (19.925,173.587,60.909)
C5: (20.450,172.472,61.425)
O3': (19.907,178.417,61.012)
OP1: (15.394,165.058,73.230)
OP2: (17.491,164.918,71.759)
C3': (14.292,168.444,69.616)
C1': (15.990,170.058,69.492)
C5': (14.916,167.765,72.038)
O4': (15.906,169.619,70.839)
C8: (17.694,168.171,69.226)
O2': (13.729,170.728,68.953)
C6: (19.367,168.863,66.221)
C5: (18.620,168.724,67.400)
C4: (17.696,169.712,67.674)
P: (16.524,165.731,72.536)
C4': (14.676,168.867,71.028)
C2': (14.669,169.680,68.819)
C2: (18.198,170.821,65.851)
N1: (19.127,169.945,65.452)
N3: (17.433,170.800,66.936)
N6: (20.293,167.988,65.822)
N7: (18.612,167.755,68.390)
N9: (17.088,169.342,68.844)
O5': (15.937,166.856,71.572)
O3': (12.916,168.113,69.463)
OP2: (17.491,164.918,71.759)
C3': (14.292,168.444,69.616)
C1': (15.990,170.058,69.492)
C5': (14.916,167.765,72.038)
O4': (15.906,169.619,70.839)
C8: (17.694,168.171,69.226)
O2': (13.729,170.728,68.953)
C6: (19.367,168.863,66.221)
C5: (18.620,168.724,67.400)
C4: (17.696,169.712,67.674)
P: (16.524,165.731,72.536)
C4': (14.676,168.867,71.028)
C2': (14.669,169.680,68.819)
C2: (18.198,170.821,65.851)
N1: (19.127,169.945,65.452)
N3: (17.433,170.800,66.936)
N6: (20.293,167.988,65.822)
N7: (18.612,167.755,68.390)
N9: (17.088,169.342,68.844)
O5': (15.937,166.856,71.572)
O3': (12.916,168.113,69.463)
Image (generated by PyMOL):