Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:030:0429
Extra
PDB:
ATOM 1 O3' G A 29 47.956 124.646 22.778 1.00 52.71 O
ATOM 2 P C A 30 49.486 124.467 22.285 1.00 52.56 P
ATOM 3 OP1 C A 30 49.456 124.580 20.812 1.00 54.60 O
ATOM 4 OP2 C A 30 50.078 123.253 22.906 1.00 51.04 O
ATOM 5 O5' C A 30 50.255 125.741 22.862 1.00 51.63 O
ATOM 6 C5' C A 30 49.909 127.085 22.463 1.00 52.49 C
ATOM 7 C4' C A 30 50.582 128.092 23.379 1.00 52.36 C
ATOM 8 O4' C A 30 50.157 127.828 24.743 1.00 53.83 O
ATOM 9 C3' C A 30 52.103 128.031 23.437 1.00 52.93 C
ATOM 10 O3' C A 30 52.716 128.802 22.401 1.00 50.99 O
ATOM 11 C2' C A 30 52.407 128.591 24.822 1.00 53.48 C
ATOM 12 O2' C A 30 52.373 130.004 24.861 1.00 52.29 O
ATOM 13 C1' C A 30 51.242 128.023 25.639 1.00 53.83 C
ATOM 14 N1 C A 30 51.539 126.734 26.303 1.00 55.01 N
ATOM 15 C2 C A 30 52.137 126.739 27.579 1.00 55.42 C
ATOM 16 O2 C A 30 52.403 127.824 28.119 1.00 55.67 O
ATOM 17 N3 C A 30 52.407 125.556 28.186 1.00 55.17 N
ATOM 18 C4 C A 30 52.110 124.407 27.573 1.00 55.87 C
ATOM 19 N4 C A 30 52.395 123.265 28.203 1.00 56.08 N
ATOM 20 C5 C A 30 51.506 124.374 26.283 1.00 55.22 C
ATOM 21 C6 C A 30 51.241 125.547 25.691 1.00 55.43 C
ATOM 22 P G A 31 54.272 128.575 22.041 1.00 52.18 P
ATOM 23 OP1 G A 31 54.635 129.615 21.041 1.00 52.67 O
ATOM 24 OP2 G A 31 54.500 127.139 21.721 1.00 48.99 O
ATOM 25 O5' G A 31 55.047 128.909 23.396 1.00 51.07 O
TER
ATOM 1 O3' C B 428 56.225 121.729 38.040 1.00 51.98 O
ATOM 2 P A B 429 54.823 122.265 38.615 1.00 52.98 P
ATOM 3 OP1 A B 429 55.034 122.504 40.071 1.00 53.11 O
ATOM 4 OP2 A B 429 53.736 121.354 38.167 1.00 52.11 O
ATOM 5 O5' A B 429 54.622 123.683 37.926 1.00 51.36 O
ATOM 6 C5' A B 429 55.594 124.727 38.092 1.00 52.98 C
ATOM 7 C4' A B 429 55.269 125.885 37.182 1.00 54.76 C
ATOM 8 O4' A B 429 55.236 125.394 35.813 1.00 55.15 O
ATOM 9 C3' A B 429 53.919 126.550 37.422 1.00 54.97 C
ATOM 10 O3' A B 429 54.003 127.931 37.105 1.00 55.83 O
ATOM 11 C2' A B 429 52.999 125.808 36.456 1.00 54.09 C
ATOM 12 O2' A B 429 51.894 126.564 36.015 1.00 52.62 O
ATOM 13 C1' A B 429 53.929 125.514 35.284 1.00 54.65 C
ATOM 14 N9 A B 429 53.575 124.241 34.661 1.00 57.65 N
ATOM 15 C8 A B 429 53.495 123.002 35.261 1.00 58.31 C
ATOM 16 N7 A B 429 53.090 122.051 34.459 1.00 59.12 N
ATOM 17 C5 A B 429 52.902 122.699 33.245 1.00 59.89 C
ATOM 18 C6 A B 429 52.467 122.244 31.993 1.00 60.96 C
ATOM 19 N6 A B 429 52.112 120.980 31.751 1.00 60.88 N
ATOM 20 N1 A B 429 52.403 123.143 30.984 1.00 61.26 N
ATOM 21 C2 A B 429 52.752 124.411 31.231 1.00 59.80 C
ATOM 22 N3 A B 429 53.168 124.962 32.368 1.00 59.30 N
ATOM 23 C4 A B 429 53.218 124.043 33.349 1.00 59.14 C
ATOM 24 P A B 430 53.338 129.011 38.087 1.00 56.76 P
ATOM 25 OP1 A B 430 54.010 128.875 39.408 1.00 57.69 O
ATOM 26 OP2 A B 430 51.862 128.874 38.005 1.00 56.76 O
ATOM 27 O5' A B 430 53.749 130.406 37.432 1.00 54.12 O
TER
ATOM 2 P C A 30 49.486 124.467 22.285 1.00 52.56 P
ATOM 3 OP1 C A 30 49.456 124.580 20.812 1.00 54.60 O
ATOM 4 OP2 C A 30 50.078 123.253 22.906 1.00 51.04 O
ATOM 5 O5' C A 30 50.255 125.741 22.862 1.00 51.63 O
ATOM 6 C5' C A 30 49.909 127.085 22.463 1.00 52.49 C
ATOM 7 C4' C A 30 50.582 128.092 23.379 1.00 52.36 C
ATOM 8 O4' C A 30 50.157 127.828 24.743 1.00 53.83 O
ATOM 9 C3' C A 30 52.103 128.031 23.437 1.00 52.93 C
ATOM 10 O3' C A 30 52.716 128.802 22.401 1.00 50.99 O
ATOM 11 C2' C A 30 52.407 128.591 24.822 1.00 53.48 C
ATOM 12 O2' C A 30 52.373 130.004 24.861 1.00 52.29 O
ATOM 13 C1' C A 30 51.242 128.023 25.639 1.00 53.83 C
ATOM 14 N1 C A 30 51.539 126.734 26.303 1.00 55.01 N
ATOM 15 C2 C A 30 52.137 126.739 27.579 1.00 55.42 C
ATOM 16 O2 C A 30 52.403 127.824 28.119 1.00 55.67 O
ATOM 17 N3 C A 30 52.407 125.556 28.186 1.00 55.17 N
ATOM 18 C4 C A 30 52.110 124.407 27.573 1.00 55.87 C
ATOM 19 N4 C A 30 52.395 123.265 28.203 1.00 56.08 N
ATOM 20 C5 C A 30 51.506 124.374 26.283 1.00 55.22 C
ATOM 21 C6 C A 30 51.241 125.547 25.691 1.00 55.43 C
ATOM 22 P G A 31 54.272 128.575 22.041 1.00 52.18 P
ATOM 23 OP1 G A 31 54.635 129.615 21.041 1.00 52.67 O
ATOM 24 OP2 G A 31 54.500 127.139 21.721 1.00 48.99 O
ATOM 25 O5' G A 31 55.047 128.909 23.396 1.00 51.07 O
TER
ATOM 1 O3' C B 428 56.225 121.729 38.040 1.00 51.98 O
ATOM 2 P A B 429 54.823 122.265 38.615 1.00 52.98 P
ATOM 3 OP1 A B 429 55.034 122.504 40.071 1.00 53.11 O
ATOM 4 OP2 A B 429 53.736 121.354 38.167 1.00 52.11 O
ATOM 5 O5' A B 429 54.622 123.683 37.926 1.00 51.36 O
ATOM 6 C5' A B 429 55.594 124.727 38.092 1.00 52.98 C
ATOM 7 C4' A B 429 55.269 125.885 37.182 1.00 54.76 C
ATOM 8 O4' A B 429 55.236 125.394 35.813 1.00 55.15 O
ATOM 9 C3' A B 429 53.919 126.550 37.422 1.00 54.97 C
ATOM 10 O3' A B 429 54.003 127.931 37.105 1.00 55.83 O
ATOM 11 C2' A B 429 52.999 125.808 36.456 1.00 54.09 C
ATOM 12 O2' A B 429 51.894 126.564 36.015 1.00 52.62 O
ATOM 13 C1' A B 429 53.929 125.514 35.284 1.00 54.65 C
ATOM 14 N9 A B 429 53.575 124.241 34.661 1.00 57.65 N
ATOM 15 C8 A B 429 53.495 123.002 35.261 1.00 58.31 C
ATOM 16 N7 A B 429 53.090 122.051 34.459 1.00 59.12 N
ATOM 17 C5 A B 429 52.902 122.699 33.245 1.00 59.89 C
ATOM 18 C6 A B 429 52.467 122.244 31.993 1.00 60.96 C
ATOM 19 N6 A B 429 52.112 120.980 31.751 1.00 60.88 N
ATOM 20 N1 A B 429 52.403 123.143 30.984 1.00 61.26 N
ATOM 21 C2 A B 429 52.752 124.411 31.231 1.00 59.80 C
ATOM 22 N3 A B 429 53.168 124.962 32.368 1.00 59.30 N
ATOM 23 C4 A B 429 53.218 124.043 33.349 1.00 59.14 C
ATOM 24 P A B 430 53.338 129.011 38.087 1.00 56.76 P
ATOM 25 OP1 A B 430 54.010 128.875 39.408 1.00 57.69 O
ATOM 26 OP2 A B 430 51.862 128.874 38.005 1.00 56.76 O
ATOM 27 O5' A B 430 53.749 130.406 37.432 1.00 54.12 O
TER
Atoms:
C2: (52.137,126.739,27.579)
OP1: (49.456,124.580,20.812)
OP2: (50.078,123.253,22.906)
C4: (52.110,124.407,27.573)
O5': (50.255,125.741,22.862)
C3': (52.103,128.031,23.437)
C1': (51.242,128.023,25.639)
O4': (50.157,127.828,24.743)
C5': (49.909,127.085,22.463)
P: (49.486,124.467,22.285)
O2: (52.403,127.824,28.119)
C4': (50.582,128.092,23.379)
C2': (52.407,128.591,24.822)
O2': (52.373,130.004,24.861)
N1: (51.539,126.734,26.303)
N3: (52.407,125.556,28.186)
N4: (52.395,123.265,28.203)
C6: (51.241,125.547,25.691)
C5: (51.506,124.374,26.283)
O3': (52.716,128.802,22.401)
OP1: (49.456,124.580,20.812)
OP2: (50.078,123.253,22.906)
C4: (52.110,124.407,27.573)
O5': (50.255,125.741,22.862)
C3': (52.103,128.031,23.437)
C1': (51.242,128.023,25.639)
O4': (50.157,127.828,24.743)
C5': (49.909,127.085,22.463)
P: (49.486,124.467,22.285)
O2: (52.403,127.824,28.119)
C4': (50.582,128.092,23.379)
C2': (52.407,128.591,24.822)
O2': (52.373,130.004,24.861)
N1: (51.539,126.734,26.303)
N3: (52.407,125.556,28.186)
N4: (52.395,123.265,28.203)
C6: (51.241,125.547,25.691)
C5: (51.506,124.374,26.283)
O3': (52.716,128.802,22.401)
OP1: (55.034,122.504,40.071)
OP2: (53.736,121.354,38.167)
C3': (53.919,126.550,37.422)
C1': (53.929,125.514,35.284)
C5': (55.594,124.727,38.092)
O4': (55.236,125.394,35.813)
C8: (53.495,123.002,35.261)
O2': (51.894,126.564,36.015)
C6: (52.467,122.244,31.993)
C5: (52.902,122.699,33.245)
C4: (53.218,124.043,33.349)
P: (54.823,122.265,38.615)
C4': (55.269,125.885,37.182)
C2': (52.999,125.808,36.456)
C2: (52.752,124.411,31.231)
N1: (52.403,123.143,30.984)
N3: (53.168,124.962,32.368)
N6: (52.112,120.980,31.751)
N7: (53.090,122.051,34.459)
N9: (53.575,124.241,34.661)
O5': (54.622,123.683,37.926)
O3': (54.003,127.931,37.105)
OP2: (53.736,121.354,38.167)
C3': (53.919,126.550,37.422)
C1': (53.929,125.514,35.284)
C5': (55.594,124.727,38.092)
O4': (55.236,125.394,35.813)
C8: (53.495,123.002,35.261)
O2': (51.894,126.564,36.015)
C6: (52.467,122.244,31.993)
C5: (52.902,122.699,33.245)
C4: (53.218,124.043,33.349)
P: (54.823,122.265,38.615)
C4': (55.269,125.885,37.182)
C2': (52.999,125.808,36.456)
C2: (52.752,124.411,31.231)
N1: (52.403,123.143,30.984)
N3: (53.168,124.962,32.368)
N6: (52.112,120.980,31.751)
N7: (53.090,122.051,34.459)
N9: (53.575,124.241,34.661)
O5': (54.622,123.683,37.926)
O3': (54.003,127.931,37.105)
Image (generated by PyMOL):