Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1978:A2355
Extra
PDB:
ATOM 1 O3' A A1977 80.121 -50.907 -16.944 1.00 49.22 O
ATOM 2 P C A1978 81.685 -50.570 -17.186 1.00 51.25 P
ATOM 3 OP1 C A1978 81.889 -49.234 -17.808 1.00 44.71 O
ATOM 4 OP2 C A1978 82.311 -51.757 -17.830 1.00 50.08 O
ATOM 5 O5' C A1978 82.260 -50.490 -15.705 1.00 49.84 O
ATOM 6 C5' C A1978 82.159 -49.307 -14.923 1.00 46.57 C
ATOM 7 C4' C A1978 83.136 -49.368 -13.770 1.00 52.81 C
ATOM 8 O4' C A1978 82.944 -50.618 -13.045 1.00 59.92 O
ATOM 9 C3' C A1978 84.611 -49.387 -14.144 1.00 46.27 C
ATOM 10 O3' C A1978 85.097 -48.065 -14.372 1.00 45.26 O
ATOM 11 C2' C A1978 85.246 -50.046 -12.929 1.00 46.42 C
ATOM 12 O2' C A1978 85.380 -49.099 -11.881 1.00 48.22 O
ATOM 13 C1' C A1978 84.188 -51.088 -12.548 1.00 49.83 C
ATOM 14 N1 C A1978 84.432 -52.458 -13.079 1.00 48.63 N
ATOM 15 C2 C A1978 85.464 -53.261 -12.525 1.00 49.70 C
ATOM 16 O2 C A1978 86.105 -52.839 -11.582 1.00 54.76 O
ATOM 17 N3 C A1978 85.717 -54.476 -13.039 1.00 45.00 N
ATOM 18 C4 C A1978 84.990 -54.918 -14.055 1.00 44.17 C
ATOM 19 N4 C A1978 85.287 -56.105 -14.555 1.00 42.63 N
ATOM 20 C5 C A1978 83.921 -54.155 -14.612 1.00 49.74 C
ATOM 21 C6 C A1978 83.680 -52.944 -14.103 1.00 52.52 C
ATOM 22 P C A1979 85.931 -47.745 -15.722 1.00 46.61 P
ATOM 23 OP1 C A1979 86.574 -46.410 -15.548 1.00 45.16 O
ATOM 24 OP2 C A1979 85.052 -47.982 -16.920 1.00 44.52 O
ATOM 25 O5' C A1979 87.102 -48.834 -15.696 1.00 54.20 O
TER
ATOM 1 O3' U B2354 95.813 -57.384 -13.909 1.00 35.33 O
ATOM 2 P A B2355 96.688 -57.459 -12.546 1.00 41.76 P
ATOM 3 OP1 A B2355 98.124 -57.305 -12.883 1.00 43.43 O
ATOM 4 OP2 A B2355 96.268 -58.550 -11.642 1.00 40.11 O
ATOM 5 O5' A B2355 96.233 -56.140 -11.780 1.00 41.77 O
ATOM 6 C5' A B2355 96.913 -54.899 -12.000 1.00 42.78 C
ATOM 7 C4' A B2355 96.021 -53.722 -11.674 1.00 40.04 C
ATOM 8 O4' A B2355 95.034 -53.550 -12.725 1.00 39.67 O
ATOM 9 C3' A B2355 95.187 -53.778 -10.396 1.00 43.18 C
ATOM 10 O3' A B2355 95.900 -53.428 -9.215 1.00 43.67 O
ATOM 11 C2' A B2355 94.110 -52.750 -10.693 1.00 48.76 C
ATOM 12 O2' A B2355 94.660 -51.455 -10.545 1.00 55.81 O
ATOM 13 C1' A B2355 93.856 -52.986 -12.180 1.00 42.88 C
ATOM 14 N9 A B2355 92.712 -53.857 -12.482 1.00 39.85 N
ATOM 15 C8 A B2355 92.703 -55.048 -13.157 1.00 40.78 C
ATOM 16 N7 A B2355 91.513 -55.578 -13.280 1.00 39.70 N
ATOM 17 C5 A B2355 90.676 -54.679 -12.639 1.00 46.53 C
ATOM 18 C6 A B2355 89.285 -54.669 -12.408 1.00 46.84 C
ATOM 19 N6 A B2355 88.444 -55.618 -12.811 1.00 41.69 N
ATOM 20 N1 A B2355 88.776 -53.632 -11.730 1.00 46.38 N
ATOM 21 C2 A B2355 89.599 -52.671 -11.311 1.00 45.37 C
ATOM 22 N3 A B2355 90.913 -52.566 -11.458 1.00 45.29 N
ATOM 23 C4 A B2355 91.400 -53.616 -12.140 1.00 46.10 C
ATOM 24 P A B2356 95.415 -54.032 -7.807 1.00 39.84 P
ATOM 25 OP1 A B2356 96.317 -53.547 -6.724 1.00 39.14 O
ATOM 26 OP2 A B2356 95.231 -55.492 -8.028 1.00 43.76 O
ATOM 27 O5' A B2356 94.020 -53.328 -7.550 1.00 36.39 O
TER
ATOM 2 P C A1978 81.685 -50.570 -17.186 1.00 51.25 P
ATOM 3 OP1 C A1978 81.889 -49.234 -17.808 1.00 44.71 O
ATOM 4 OP2 C A1978 82.311 -51.757 -17.830 1.00 50.08 O
ATOM 5 O5' C A1978 82.260 -50.490 -15.705 1.00 49.84 O
ATOM 6 C5' C A1978 82.159 -49.307 -14.923 1.00 46.57 C
ATOM 7 C4' C A1978 83.136 -49.368 -13.770 1.00 52.81 C
ATOM 8 O4' C A1978 82.944 -50.618 -13.045 1.00 59.92 O
ATOM 9 C3' C A1978 84.611 -49.387 -14.144 1.00 46.27 C
ATOM 10 O3' C A1978 85.097 -48.065 -14.372 1.00 45.26 O
ATOM 11 C2' C A1978 85.246 -50.046 -12.929 1.00 46.42 C
ATOM 12 O2' C A1978 85.380 -49.099 -11.881 1.00 48.22 O
ATOM 13 C1' C A1978 84.188 -51.088 -12.548 1.00 49.83 C
ATOM 14 N1 C A1978 84.432 -52.458 -13.079 1.00 48.63 N
ATOM 15 C2 C A1978 85.464 -53.261 -12.525 1.00 49.70 C
ATOM 16 O2 C A1978 86.105 -52.839 -11.582 1.00 54.76 O
ATOM 17 N3 C A1978 85.717 -54.476 -13.039 1.00 45.00 N
ATOM 18 C4 C A1978 84.990 -54.918 -14.055 1.00 44.17 C
ATOM 19 N4 C A1978 85.287 -56.105 -14.555 1.00 42.63 N
ATOM 20 C5 C A1978 83.921 -54.155 -14.612 1.00 49.74 C
ATOM 21 C6 C A1978 83.680 -52.944 -14.103 1.00 52.52 C
ATOM 22 P C A1979 85.931 -47.745 -15.722 1.00 46.61 P
ATOM 23 OP1 C A1979 86.574 -46.410 -15.548 1.00 45.16 O
ATOM 24 OP2 C A1979 85.052 -47.982 -16.920 1.00 44.52 O
ATOM 25 O5' C A1979 87.102 -48.834 -15.696 1.00 54.20 O
TER
ATOM 1 O3' U B2354 95.813 -57.384 -13.909 1.00 35.33 O
ATOM 2 P A B2355 96.688 -57.459 -12.546 1.00 41.76 P
ATOM 3 OP1 A B2355 98.124 -57.305 -12.883 1.00 43.43 O
ATOM 4 OP2 A B2355 96.268 -58.550 -11.642 1.00 40.11 O
ATOM 5 O5' A B2355 96.233 -56.140 -11.780 1.00 41.77 O
ATOM 6 C5' A B2355 96.913 -54.899 -12.000 1.00 42.78 C
ATOM 7 C4' A B2355 96.021 -53.722 -11.674 1.00 40.04 C
ATOM 8 O4' A B2355 95.034 -53.550 -12.725 1.00 39.67 O
ATOM 9 C3' A B2355 95.187 -53.778 -10.396 1.00 43.18 C
ATOM 10 O3' A B2355 95.900 -53.428 -9.215 1.00 43.67 O
ATOM 11 C2' A B2355 94.110 -52.750 -10.693 1.00 48.76 C
ATOM 12 O2' A B2355 94.660 -51.455 -10.545 1.00 55.81 O
ATOM 13 C1' A B2355 93.856 -52.986 -12.180 1.00 42.88 C
ATOM 14 N9 A B2355 92.712 -53.857 -12.482 1.00 39.85 N
ATOM 15 C8 A B2355 92.703 -55.048 -13.157 1.00 40.78 C
ATOM 16 N7 A B2355 91.513 -55.578 -13.280 1.00 39.70 N
ATOM 17 C5 A B2355 90.676 -54.679 -12.639 1.00 46.53 C
ATOM 18 C6 A B2355 89.285 -54.669 -12.408 1.00 46.84 C
ATOM 19 N6 A B2355 88.444 -55.618 -12.811 1.00 41.69 N
ATOM 20 N1 A B2355 88.776 -53.632 -11.730 1.00 46.38 N
ATOM 21 C2 A B2355 89.599 -52.671 -11.311 1.00 45.37 C
ATOM 22 N3 A B2355 90.913 -52.566 -11.458 1.00 45.29 N
ATOM 23 C4 A B2355 91.400 -53.616 -12.140 1.00 46.10 C
ATOM 24 P A B2356 95.415 -54.032 -7.807 1.00 39.84 P
ATOM 25 OP1 A B2356 96.317 -53.547 -6.724 1.00 39.14 O
ATOM 26 OP2 A B2356 95.231 -55.492 -8.028 1.00 43.76 O
ATOM 27 O5' A B2356 94.020 -53.328 -7.550 1.00 36.39 O
TER
Atoms:
C2: (85.464,-53.261,-12.525)
OP1: (81.889,-49.234,-17.808)
OP2: (82.311,-51.757,-17.830)
C4: (84.990,-54.918,-14.055)
O5': (82.260,-50.490,-15.705)
C3': (84.611,-49.387,-14.144)
C1': (84.188,-51.088,-12.548)
O4': (82.944,-50.618,-13.045)
C5': (82.159,-49.307,-14.923)
P: (81.685,-50.570,-17.186)
O2: (86.105,-52.839,-11.582)
C4': (83.136,-49.368,-13.770)
C2': (85.246,-50.046,-12.929)
O2': (85.380,-49.099,-11.881)
N1: (84.432,-52.458,-13.079)
N3: (85.717,-54.476,-13.039)
N4: (85.287,-56.105,-14.555)
C6: (83.680,-52.944,-14.103)
C5: (83.921,-54.155,-14.612)
O3': (85.097,-48.065,-14.372)
OP1: (81.889,-49.234,-17.808)
OP2: (82.311,-51.757,-17.830)
C4: (84.990,-54.918,-14.055)
O5': (82.260,-50.490,-15.705)
C3': (84.611,-49.387,-14.144)
C1': (84.188,-51.088,-12.548)
O4': (82.944,-50.618,-13.045)
C5': (82.159,-49.307,-14.923)
P: (81.685,-50.570,-17.186)
O2: (86.105,-52.839,-11.582)
C4': (83.136,-49.368,-13.770)
C2': (85.246,-50.046,-12.929)
O2': (85.380,-49.099,-11.881)
N1: (84.432,-52.458,-13.079)
N3: (85.717,-54.476,-13.039)
N4: (85.287,-56.105,-14.555)
C6: (83.680,-52.944,-14.103)
C5: (83.921,-54.155,-14.612)
O3': (85.097,-48.065,-14.372)
OP1: (98.124,-57.305,-12.883)
OP2: (96.268,-58.550,-11.642)
C3': (95.187,-53.778,-10.396)
C1': (93.856,-52.986,-12.180)
C5': (96.913,-54.899,-12.000)
O4': (95.034,-53.550,-12.725)
C8: (92.703,-55.048,-13.157)
O2': (94.660,-51.455,-10.545)
C6: (89.285,-54.669,-12.408)
C5: (90.676,-54.679,-12.639)
C4: (91.400,-53.616,-12.140)
P: (96.688,-57.459,-12.546)
C4': (96.021,-53.722,-11.674)
C2': (94.110,-52.750,-10.693)
C2: (89.599,-52.671,-11.311)
N1: (88.776,-53.632,-11.730)
N3: (90.913,-52.566,-11.458)
N6: (88.444,-55.618,-12.811)
N7: (91.513,-55.578,-13.280)
N9: (92.712,-53.857,-12.482)
O5': (96.233,-56.140,-11.780)
O3': (95.900,-53.428,-9.215)
OP2: (96.268,-58.550,-11.642)
C3': (95.187,-53.778,-10.396)
C1': (93.856,-52.986,-12.180)
C5': (96.913,-54.899,-12.000)
O4': (95.034,-53.550,-12.725)
C8: (92.703,-55.048,-13.157)
O2': (94.660,-51.455,-10.545)
C6: (89.285,-54.669,-12.408)
C5: (90.676,-54.679,-12.639)
C4: (91.400,-53.616,-12.140)
P: (96.688,-57.459,-12.546)
C4': (96.021,-53.722,-11.674)
C2': (94.110,-52.750,-10.693)
C2: (89.599,-52.671,-11.311)
N1: (88.776,-53.632,-11.730)
N3: (90.913,-52.566,-11.458)
N6: (88.444,-55.618,-12.811)
N7: (91.513,-55.578,-13.280)
N9: (92.712,-53.857,-12.482)
O5': (96.233,-56.140,-11.780)
O3': (95.900,-53.428,-9.215)
Image (generated by PyMOL):