ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2V3C:N59:N78

Extra

PDB:
ATOM 1 O3' G A 58 -15.667 38.425 267.149 1.00 35.98 O
ATOM 2 P C A 59 -14.602 39.536 267.515 1.00 42.51 P
ATOM 3 OP1 C A 59 -15.109 40.261 268.686 1.00 42.54 O
ATOM 4 OP2 C A 59 -14.148 40.344 266.375 1.00 42.97 O
ATOM 5 O5' C A 59 -13.400 38.589 267.871 1.00 42.21 O
ATOM 6 C5' C A 59 -13.470 37.838 269.081 1.00 42.48 C
ATOM 7 C4' C A 59 -12.126 37.117 269.213 1.00 37.35 C
ATOM 8 O4' C A 59 -12.015 36.514 267.952 1.00 32.47 O
ATOM 9 C3' C A 59 -10.883 37.982 269.211 1.00 37.51 C
ATOM 10 O3' C A 59 -10.565 38.425 270.565 1.00 40.82 O
ATOM 11 C2' C A 59 -9.957 36.850 268.874 1.00 38.10 C
ATOM 12 O2' C A 59 -9.949 36.030 270.034 1.00 39.56 O
ATOM 13 C1' C A 59 -10.678 36.142 267.733 1.00 34.99 C
ATOM 14 N1 C A 59 -10.466 36.540 266.323 1.00 30.69 N
ATOM 15 C2 C A 59 -9.518 35.938 265.529 1.00 34.19 C
ATOM 16 O2 C A 59 -8.719 35.086 266.034 1.00 34.24 O
ATOM 17 N3 C A 59 -9.447 36.310 264.219 1.00 32.48 N
ATOM 18 C4 C A 59 -10.244 37.240 263.724 1.00 33.11 C
ATOM 19 N4 C A 59 -10.106 37.595 262.425 1.00 33.51 N
ATOM 20 C5 C A 59 -11.240 37.821 264.525 1.00 31.25 C
ATOM 21 C6 C A 59 -11.310 37.441 265.797 1.00 30.12 C
ATOM 22 P C A 60 -10.258 39.928 271.022 1.00 40.05 P
ATOM 23 OP1 C A 60 -9.371 39.879 272.213 1.00 42.10 O
ATOM 24 OP2 C A 60 -11.389 40.811 271.101 1.00 39.79 O
ATOM 25 O5' C A 60 -9.515 40.403 269.715 1.00 42.73 O
TER

ATOM 1 O3' A B 77 -1.562 30.697 259.324 1.00 25.43 O
ATOM 2 P A B 78 -2.664 29.589 259.300 1.00 33.32 P
ATOM 3 OP1 A B 78 -1.997 28.457 258.655 1.00 30.95 O
ATOM 4 OP2 A B 78 -4.030 29.968 258.884 1.00 27.77 O
ATOM 5 O5' A B 78 -2.744 29.522 260.918 1.00 33.04 O
ATOM 6 C5' A B 78 -1.662 28.875 261.466 1.00 33.59 C
ATOM 7 C4' A B 78 -1.672 28.990 262.949 1.00 31.74 C
ATOM 8 O4' A B 78 -1.526 30.382 263.311 1.00 36.12 O
ATOM 9 C3' A B 78 -2.964 28.545 263.525 1.00 31.48 C
ATOM 10 O3' A B 78 -2.739 27.262 263.973 1.00 32.68 O
ATOM 11 C2' A B 78 -2.827 29.343 264.793 1.00 33.07 C
ATOM 12 O2' A B 78 -1.696 28.774 265.387 1.00 31.28 O
ATOM 13 C1' A B 78 -2.449 30.723 264.337 1.00 31.42 C
ATOM 14 N9 A B 78 -3.611 31.446 263.879 1.00 28.13 N
ATOM 15 C8 A B 78 -4.047 31.598 262.617 1.00 30.58 C
ATOM 16 N7 A B 78 -5.183 32.357 262.529 1.00 31.23 N
ATOM 17 C5 A B 78 -5.491 32.714 263.795 1.00 25.15 C
ATOM 18 C6 A B 78 -6.509 33.480 264.310 1.00 28.60 C
ATOM 19 N6 A B 78 -7.518 34.061 263.629 1.00 26.41 N
ATOM 20 N1 A B 78 -6.494 33.636 265.671 1.00 32.96 N
ATOM 21 C2 A B 78 -5.533 33.074 266.428 1.00 27.78 C
ATOM 22 N3 A B 78 -4.520 32.357 266.028 1.00 30.24 N
ATOM 23 C4 A B 78 -4.541 32.186 264.661 1.00 31.17 C
ATOM 24 P C B 79 -3.825 26.197 263.687 1.00 34.20 P
ATOM 25 OP1 C B 79 -3.075 24.989 263.642 1.00 37.00 O
ATOM 26 OP2 C B 79 -4.591 26.763 262.585 1.00 32.69 O
ATOM 27 O5' C B 79 -4.906 26.257 264.863 1.00 39.07 O
TER

Atoms:
C2: (-9.518,35.938,265.529)
OP1: (-15.109,40.261,268.686)
OP2: (-14.148,40.344,266.375)
C4: (-10.244,37.240,263.724)
O5': (-13.400,38.589,267.871)
C3': (-10.883,37.982,269.211)
C1': (-10.678,36.142,267.733)
O4': (-12.015,36.514,267.952)
C5': (-13.470,37.838,269.081)
P: (-14.602,39.536,267.515)
O2: (-8.719,35.086,266.034)
C4': (-12.126,37.117,269.213)
C2': (-9.957,36.850,268.874)
O2': (-9.949,36.030,270.034)
N1: (-10.466,36.540,266.323)
N3: (-9.447,36.310,264.219)
N4: (-10.106,37.595,262.425)
C6: (-11.310,37.441,265.797)
C5: (-11.240,37.821,264.525)
O3': (-10.565,38.425,270.565)
OP1: (-1.997,28.457,258.655)
OP2: (-4.030,29.968,258.884)
C3': (-2.964,28.545,263.525)
C1': (-2.449,30.723,264.337)
C5': (-1.662,28.875,261.466)
O4': (-1.526,30.382,263.311)
C8: (-4.047,31.598,262.617)
O2': (-1.696,28.774,265.387)
C6: (-6.509,33.480,264.310)
C5: (-5.491,32.714,263.795)
C4: (-4.541,32.186,264.661)
P: (-2.664,29.589,259.300)
C4': (-1.672,28.990,262.949)
C2': (-2.827,29.343,264.793)
C2: (-5.533,33.074,266.428)
N1: (-6.494,33.636,265.671)
N3: (-4.520,32.357,266.028)
N6: (-7.518,34.061,263.629)
N7: (-5.183,32.357,262.529)
N9: (-3.611,31.446,263.879)
O5': (-2.744,29.522,260.918)
O3': (-2.739,27.262,263.973)
Image (generated by PyMOL):
PyMOL image
show in jmol