Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:52104:52110
Extra
PDB:
ATOM 1 O3' U A2103 192.829 28.339 244.806 1.00 37.65 O
ATOM 2 P C A2104 192.138 29.490 245.628 1.00 40.29 P
ATOM 3 OP1 C A2104 193.045 30.649 245.577 1.00 40.57 O
ATOM 4 OP2 C A2104 191.726 28.930 246.941 1.00 40.11 O
ATOM 5 O5' C A2104 190.868 29.805 244.788 1.00 40.14 O
ATOM 6 C5' C A2104 190.935 29.977 243.414 1.00 40.25 C
ATOM 7 C4' C A2104 189.569 30.055 242.889 1.00 40.06 C
ATOM 8 O4' C A2104 189.055 28.719 242.671 1.00 39.86 O
ATOM 9 C3' C A2104 188.569 30.673 243.824 1.00 39.90 C
ATOM 10 O3' C A2104 188.655 32.083 243.814 1.00 40.06 O
ATOM 11 C2' C A2104 187.240 30.120 243.300 1.00 39.66 C
ATOM 12 O2' C A2104 186.752 30.922 242.219 1.00 39.74 O
ATOM 13 C1' C A2104 187.655 28.728 242.757 1.00 39.63 C
ATOM 14 N1 C A2104 187.256 27.617 243.641 1.00 39.42 N
ATOM 15 C2 C A2104 186.378 26.571 243.282 1.00 39.22 C
ATOM 16 O2 C A2104 185.855 26.504 242.172 1.00 39.21 O
ATOM 17 N3 C A2104 186.084 25.617 244.186 1.00 39.05 N
ATOM 18 C4 C A2104 186.646 25.707 245.376 1.00 39.08 C
ATOM 19 N4 C A2104 186.377 24.800 246.271 1.00 38.93 N
ATOM 20 C5 C A2104 187.534 26.722 245.766 1.00 39.28 C
ATOM 21 C6 C A2104 187.812 27.636 244.868 1.00 39.44 C
ATOM 22 P U A2105 188.081 32.946 245.040 1.00 39.03 P
ATOM 23 OP1 U A2105 188.174 34.385 244.655 1.00 39.23 O
ATOM 24 OP2 U A2105 188.788 32.477 246.292 1.00 39.03 O
ATOM 25 O5' U A2105 186.566 32.476 245.082 1.00 38.74 O
TER
ATOM 1 O3' U B2109 178.132 17.151 244.377 1.00 41.53 O
ATOM 2 P A B2110 179.381 17.291 243.397 1.00 39.80 P
ATOM 3 OP1 A B2110 179.410 16.042 242.589 1.00 39.82 O
ATOM 4 OP2 A B2110 180.533 17.617 244.225 1.00 39.91 O
ATOM 5 O5' A B2110 179.037 18.534 242.489 1.00 39.86 O
ATOM 6 C5' A B2110 178.050 18.462 241.503 1.00 39.81 C
ATOM 7 C4' A B2110 178.088 19.667 240.634 1.00 39.93 C
ATOM 8 O4' A B2110 178.088 20.867 241.445 1.00 39.92 O
ATOM 9 C3' A B2110 179.324 19.825 239.792 1.00 40.14 C
ATOM 10 O3' A B2110 179.348 18.979 238.673 1.00 40.20 O
ATOM 11 C2' A B2110 179.244 21.258 239.412 1.00 40.23 C
ATOM 12 O2' A B2110 178.299 21.402 238.394 1.00 40.21 O
ATOM 13 C1' A B2110 178.706 21.894 240.708 1.00 40.10 C
ATOM 14 N9 A B2110 179.813 22.445 241.487 1.00 40.21 N
ATOM 15 C8 A B2110 180.368 21.985 242.619 1.00 40.18 C
ATOM 16 N7 A B2110 181.432 22.648 242.972 1.00 40.33 N
ATOM 17 C5 A B2110 181.597 23.610 241.994 1.00 40.48 C
ATOM 18 C6 A B2110 182.544 24.632 241.793 1.00 40.68 C
ATOM 19 N6 A B2110 183.578 24.922 242.628 1.00 40.79 N
ATOM 20 N1 A B2110 182.401 25.379 240.679 1.00 40.80 N
ATOM 21 C2 A B2110 181.397 25.145 239.857 1.00 40.71 C
ATOM 22 N3 A B2110 180.471 24.217 239.970 1.00 40.52 N
ATOM 23 C4 A B2110 180.626 23.469 241.062 1.00 40.41 C
ATOM 24 P G B2111 180.742 18.329 238.183 1.00 34.43 P
ATOM 25 OP1 G B2111 180.477 17.655 236.884 1.00 34.49 O
ATOM 26 OP2 G B2111 181.274 17.526 239.316 1.00 34.37 O
ATOM 27 O5' G B2111 181.645 19.607 237.932 1.00 34.62 O
TER
ATOM 2 P C A2104 192.138 29.490 245.628 1.00 40.29 P
ATOM 3 OP1 C A2104 193.045 30.649 245.577 1.00 40.57 O
ATOM 4 OP2 C A2104 191.726 28.930 246.941 1.00 40.11 O
ATOM 5 O5' C A2104 190.868 29.805 244.788 1.00 40.14 O
ATOM 6 C5' C A2104 190.935 29.977 243.414 1.00 40.25 C
ATOM 7 C4' C A2104 189.569 30.055 242.889 1.00 40.06 C
ATOM 8 O4' C A2104 189.055 28.719 242.671 1.00 39.86 O
ATOM 9 C3' C A2104 188.569 30.673 243.824 1.00 39.90 C
ATOM 10 O3' C A2104 188.655 32.083 243.814 1.00 40.06 O
ATOM 11 C2' C A2104 187.240 30.120 243.300 1.00 39.66 C
ATOM 12 O2' C A2104 186.752 30.922 242.219 1.00 39.74 O
ATOM 13 C1' C A2104 187.655 28.728 242.757 1.00 39.63 C
ATOM 14 N1 C A2104 187.256 27.617 243.641 1.00 39.42 N
ATOM 15 C2 C A2104 186.378 26.571 243.282 1.00 39.22 C
ATOM 16 O2 C A2104 185.855 26.504 242.172 1.00 39.21 O
ATOM 17 N3 C A2104 186.084 25.617 244.186 1.00 39.05 N
ATOM 18 C4 C A2104 186.646 25.707 245.376 1.00 39.08 C
ATOM 19 N4 C A2104 186.377 24.800 246.271 1.00 38.93 N
ATOM 20 C5 C A2104 187.534 26.722 245.766 1.00 39.28 C
ATOM 21 C6 C A2104 187.812 27.636 244.868 1.00 39.44 C
ATOM 22 P U A2105 188.081 32.946 245.040 1.00 39.03 P
ATOM 23 OP1 U A2105 188.174 34.385 244.655 1.00 39.23 O
ATOM 24 OP2 U A2105 188.788 32.477 246.292 1.00 39.03 O
ATOM 25 O5' U A2105 186.566 32.476 245.082 1.00 38.74 O
TER
ATOM 1 O3' U B2109 178.132 17.151 244.377 1.00 41.53 O
ATOM 2 P A B2110 179.381 17.291 243.397 1.00 39.80 P
ATOM 3 OP1 A B2110 179.410 16.042 242.589 1.00 39.82 O
ATOM 4 OP2 A B2110 180.533 17.617 244.225 1.00 39.91 O
ATOM 5 O5' A B2110 179.037 18.534 242.489 1.00 39.86 O
ATOM 6 C5' A B2110 178.050 18.462 241.503 1.00 39.81 C
ATOM 7 C4' A B2110 178.088 19.667 240.634 1.00 39.93 C
ATOM 8 O4' A B2110 178.088 20.867 241.445 1.00 39.92 O
ATOM 9 C3' A B2110 179.324 19.825 239.792 1.00 40.14 C
ATOM 10 O3' A B2110 179.348 18.979 238.673 1.00 40.20 O
ATOM 11 C2' A B2110 179.244 21.258 239.412 1.00 40.23 C
ATOM 12 O2' A B2110 178.299 21.402 238.394 1.00 40.21 O
ATOM 13 C1' A B2110 178.706 21.894 240.708 1.00 40.10 C
ATOM 14 N9 A B2110 179.813 22.445 241.487 1.00 40.21 N
ATOM 15 C8 A B2110 180.368 21.985 242.619 1.00 40.18 C
ATOM 16 N7 A B2110 181.432 22.648 242.972 1.00 40.33 N
ATOM 17 C5 A B2110 181.597 23.610 241.994 1.00 40.48 C
ATOM 18 C6 A B2110 182.544 24.632 241.793 1.00 40.68 C
ATOM 19 N6 A B2110 183.578 24.922 242.628 1.00 40.79 N
ATOM 20 N1 A B2110 182.401 25.379 240.679 1.00 40.80 N
ATOM 21 C2 A B2110 181.397 25.145 239.857 1.00 40.71 C
ATOM 22 N3 A B2110 180.471 24.217 239.970 1.00 40.52 N
ATOM 23 C4 A B2110 180.626 23.469 241.062 1.00 40.41 C
ATOM 24 P G B2111 180.742 18.329 238.183 1.00 34.43 P
ATOM 25 OP1 G B2111 180.477 17.655 236.884 1.00 34.49 O
ATOM 26 OP2 G B2111 181.274 17.526 239.316 1.00 34.37 O
ATOM 27 O5' G B2111 181.645 19.607 237.932 1.00 34.62 O
TER
Atoms:
C2: (186.378,26.571,243.282)
OP1: (193.045,30.649,245.577)
OP2: (191.726,28.930,246.941)
C4: (186.646,25.707,245.376)
O5': (190.868,29.805,244.788)
C3': (188.569,30.673,243.824)
C1': (187.655,28.728,242.757)
O4': (189.055,28.719,242.671)
C5': (190.935,29.977,243.414)
P: (192.138,29.490,245.628)
O2: (185.855,26.504,242.172)
C4': (189.569,30.055,242.889)
C2': (187.240,30.120,243.300)
O2': (186.752,30.922,242.219)
N1: (187.256,27.617,243.641)
N3: (186.084,25.617,244.186)
N4: (186.377,24.800,246.271)
C6: (187.812,27.636,244.868)
C5: (187.534,26.722,245.766)
O3': (188.655,32.083,243.814)
OP1: (193.045,30.649,245.577)
OP2: (191.726,28.930,246.941)
C4: (186.646,25.707,245.376)
O5': (190.868,29.805,244.788)
C3': (188.569,30.673,243.824)
C1': (187.655,28.728,242.757)
O4': (189.055,28.719,242.671)
C5': (190.935,29.977,243.414)
P: (192.138,29.490,245.628)
O2: (185.855,26.504,242.172)
C4': (189.569,30.055,242.889)
C2': (187.240,30.120,243.300)
O2': (186.752,30.922,242.219)
N1: (187.256,27.617,243.641)
N3: (186.084,25.617,244.186)
N4: (186.377,24.800,246.271)
C6: (187.812,27.636,244.868)
C5: (187.534,26.722,245.766)
O3': (188.655,32.083,243.814)
OP1: (179.410,16.042,242.589)
OP2: (180.533,17.617,244.225)
C3': (179.324,19.825,239.792)
C1': (178.706,21.894,240.708)
C5': (178.050,18.462,241.503)
O4': (178.088,20.867,241.445)
C8: (180.368,21.985,242.619)
O2': (178.299,21.402,238.394)
C6: (182.544,24.632,241.793)
C5: (181.597,23.610,241.994)
C4: (180.626,23.469,241.062)
P: (179.381,17.291,243.397)
C4': (178.088,19.667,240.634)
C2': (179.244,21.258,239.412)
C2: (181.397,25.145,239.857)
N1: (182.401,25.379,240.679)
N3: (180.471,24.217,239.970)
N6: (183.578,24.922,242.628)
N7: (181.432,22.648,242.972)
N9: (179.813,22.445,241.487)
O5': (179.037,18.534,242.489)
O3': (179.348,18.979,238.673)
OP2: (180.533,17.617,244.225)
C3': (179.324,19.825,239.792)
C1': (178.706,21.894,240.708)
C5': (178.050,18.462,241.503)
O4': (178.088,20.867,241.445)
C8: (180.368,21.985,242.619)
O2': (178.299,21.402,238.394)
C6: (182.544,24.632,241.793)
C5: (181.597,23.610,241.994)
C4: (180.626,23.469,241.062)
P: (179.381,17.291,243.397)
C4': (178.088,19.667,240.634)
C2': (179.244,21.258,239.412)
C2: (181.397,25.145,239.857)
N1: (182.401,25.379,240.679)
N3: (180.471,24.217,239.970)
N6: (183.578,24.922,242.628)
N7: (181.432,22.648,242.972)
N9: (179.813,22.445,241.487)
O5': (179.037,18.534,242.489)
O3': (179.348,18.979,238.673)
Image (generated by PyMOL):