ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A643:A702

Extra

PDB:
ATOM 1 O3' G A 642 167.534 118.326 -61.463 1.00 62.77 O
ATOM 2 P A A 643 168.563 118.036 -62.675 1.00 56.90 P
ATOM 3 OP1 A A 643 169.288 119.314 -62.912 1.00 38.10 O
ATOM 4 OP2 A A 643 167.887 117.344 -63.825 1.00 38.10 O
ATOM 5 O5' A A 643 169.604 117.019 -62.021 1.00 56.90 O
ATOM 6 C5' A A 643 170.114 115.926 -62.778 1.00 56.90 C
ATOM 7 C4' A A 643 170.254 114.692 -61.919 1.00 56.90 C
ATOM 8 O4' A A 643 171.458 114.724 -61.120 1.00 56.90 O
ATOM 9 C3' A A 643 169.185 114.370 -60.899 1.00 56.90 C
ATOM 10 O3' A A 643 168.022 113.828 -61.501 1.00 56.90 O
ATOM 11 C2' A A 643 169.886 113.305 -60.065 1.00 56.90 C
ATOM 12 O2' A A 643 169.854 112.068 -60.742 1.00 56.90 O
ATOM 13 C1' A A 643 171.335 113.782 -60.080 1.00 56.90 C
ATOM 14 N9 A A 643 171.795 114.378 -58.827 1.00 38.10 N
ATOM 15 C8 A A 643 171.742 115.691 -58.429 1.00 38.10 C
ATOM 16 N7 A A 643 172.273 115.908 -57.245 1.00 38.10 N
ATOM 17 C5 A A 643 172.697 114.655 -56.839 1.00 38.10 C
ATOM 18 C6 A A 643 173.341 114.218 -55.685 1.00 38.10 C
ATOM 19 N6 A A 643 173.690 115.031 -54.688 1.00 38.10 N
ATOM 20 N1 A A 643 173.623 112.899 -55.579 1.00 38.10 N
ATOM 21 C2 A A 643 173.271 112.086 -56.583 1.00 38.10 C
ATOM 22 N3 A A 643 172.657 112.381 -57.723 1.00 38.10 N
ATOM 23 C4 A A 643 172.398 113.700 -57.793 1.00 38.10 C
ATOM 24 P G A 644 166.623 113.866 -60.706 1.00 47.99 P
ATOM 25 OP1 G A 644 165.584 114.211 -61.706 1.00 56.64 O
ATOM 26 OP2 G A 644 166.764 114.685 -59.482 1.00 56.64 O
ATOM 27 O5' G A 644 166.393 112.352 -60.274 1.00 47.99 O
TER

ATOM 1 O3' U B 701 172.479 124.558 -48.124 1.00200.48 O
ATOM 2 P G B 702 171.775 123.274 -48.791 1.00 65.24 P
ATOM 3 OP1 G B 702 170.382 123.254 -48.285 1.00 54.82 O
ATOM 4 OP2 G B 702 172.649 122.082 -48.560 1.00 54.82 O
ATOM 5 O5' G B 702 171.673 123.607 -50.350 1.00 65.24 O
ATOM 6 C5' G B 702 170.945 124.759 -50.806 1.00 65.24 C
ATOM 7 C4' G B 702 170.499 124.585 -52.241 1.00 65.24 C
ATOM 8 O4' G B 702 171.657 124.301 -53.072 1.00 65.24 O
ATOM 9 C3' G B 702 169.541 123.448 -52.551 1.00 65.24 C
ATOM 10 O3' G B 702 168.169 123.731 -52.276 1.00 65.24 O
ATOM 11 C2' G B 702 169.786 123.229 -54.037 1.00 65.24 C
ATOM 12 O2' G B 702 169.138 124.193 -54.837 1.00 65.24 O
ATOM 13 C1' G B 702 171.294 123.429 -54.132 1.00 65.24 C
ATOM 14 N9 G B 702 171.974 122.151 -53.930 1.00 54.82 N
ATOM 15 C8 G B 702 172.766 121.798 -52.862 1.00 54.82 C
ATOM 16 N7 G B 702 173.171 120.559 -52.911 1.00 54.82 N
ATOM 17 C5 G B 702 172.634 120.064 -54.091 1.00 54.82 C
ATOM 18 C6 G B 702 172.717 118.774 -54.659 1.00 54.82 C
ATOM 19 O6 G B 702 173.294 117.779 -54.216 1.00 54.82 O
ATOM 20 N1 G B 702 172.027 118.696 -55.862 1.00 54.82 N
ATOM 21 C2 G B 702 171.339 119.728 -56.441 1.00 54.82 C
ATOM 22 N2 G B 702 170.751 119.451 -57.605 1.00 54.82 N
ATOM 23 N3 G B 702 171.239 120.939 -55.917 1.00 54.82 N
ATOM 24 C4 G B 702 171.909 121.037 -54.747 1.00 54.82 C
ATOM 25 P G B 703 167.146 122.504 -52.008 1.00 50.26 P
ATOM 26 OP1 G B 703 165.797 123.066 -51.753 1.00 47.78 O
ATOM 27 OP2 G B 703 167.756 121.585 -51.004 1.00 47.78 O
ATOM 28 O5' G B 703 167.071 121.743 -53.402 1.00 50.26 O
TER

Atoms:
OP1: (169.288,119.314,-62.912)
OP2: (167.887,117.344,-63.825)
C3': (169.185,114.370,-60.899)
C1': (171.335,113.782,-60.080)
C5': (170.114,115.926,-62.778)
O4': (171.458,114.724,-61.120)
C8: (171.742,115.691,-58.429)
O2': (169.854,112.068,-60.742)
C6: (173.341,114.218,-55.685)
C5: (172.697,114.655,-56.839)
C4: (172.398,113.700,-57.793)
P: (168.563,118.036,-62.675)
C4': (170.254,114.692,-61.919)
C2': (169.886,113.305,-60.065)
C2: (173.271,112.086,-56.583)
N1: (173.623,112.899,-55.579)
N3: (172.657,112.381,-57.723)
N6: (173.690,115.031,-54.688)
N7: (172.273,115.908,-57.245)
N9: (171.795,114.378,-58.827)
O5': (169.604,117.019,-62.021)
O3': (168.022,113.828,-61.501)
OP1: (170.382,123.254,-48.285)
OP2: (172.649,122.082,-48.560)
C3': (169.541,123.448,-52.551)
C1': (171.294,123.429,-54.132)
C5': (170.945,124.759,-50.806)
O6: (173.294,117.779,-54.216)
O4': (171.657,124.301,-53.072)
C8: (172.766,121.798,-52.862)
C2: (171.339,119.728,-56.441)
C6: (172.717,118.774,-54.659)
C5: (172.634,120.064,-54.091)
C4: (171.909,121.037,-54.747)
P: (171.775,123.274,-48.791)
C4': (170.499,124.585,-52.241)
C2': (169.786,123.229,-54.037)
O2': (169.138,124.193,-54.837)
N1: (172.027,118.696,-55.862)
N2: (170.751,119.451,-57.605)
N3: (171.239,120.939,-55.917)
N7: (173.171,120.559,-52.911)
N9: (171.974,122.151,-53.930)
O5': (171.673,123.607,-50.350)
O3': (168.169,123.731,-52.276)
Image (generated by PyMOL):
PyMOL image
show in jmol