Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:493:464
Extra
PDB:
ATOM 1 O3' U A 92 82.445 -2.639 127.678 1.00 60.95 O
ATOM 2 P C A 93 80.971 -3.200 127.704 1.00 54.21 P
ATOM 3 OP1 C A 93 81.073 -4.672 127.858 1.00 54.16 O
ATOM 4 OP2 C A 93 80.263 -2.646 126.522 1.00 53.45 O
ATOM 5 O5' C A 93 80.401 -2.550 129.017 1.00 54.75 O
ATOM 6 C5' C A 93 80.842 -2.997 130.275 1.00 55.50 C
ATOM 7 C4' C A 93 80.303 -2.132 131.368 1.00 56.00 C
ATOM 8 O4' C A 93 80.601 -0.761 131.079 1.00 56.14 O
ATOM 9 C3' C A 93 78.801 -2.145 131.556 1.00 55.61 C
ATOM 10 O3' C A 93 78.368 -3.288 132.276 1.00 55.71 O
ATOM 11 C2' C A 93 78.556 -0.816 132.284 1.00 56.11 C
ATOM 12 O2' C A 93 78.811 -0.935 133.698 1.00 56.96 O
ATOM 13 C1' C A 93 79.644 0.068 131.663 1.00 56.26 C
ATOM 14 N1 C A 93 79.153 0.938 130.630 1.00 55.68 N
ATOM 15 C2 C A 93 78.478 2.085 130.990 1.00 55.84 C
ATOM 16 O2 C A 93 78.247 2.280 132.189 1.00 56.46 O
ATOM 17 N3 C A 93 78.071 2.911 129.990 1.00 55.31 N
ATOM 18 C4 C A 93 78.354 2.608 128.714 1.00 54.68 C
ATOM 19 N4 C A 93 77.945 3.466 127.800 1.00 54.22 N
ATOM 20 C5 C A 93 79.069 1.440 128.333 1.00 54.52 C
ATOM 21 C6 C A 93 79.466 0.643 129.334 1.00 55.05 C
ATOM 22 P G A 94 76.944 -3.960 131.996 1.00 58.63 P
ATOM 23 OP1 G A 94 77.192 -5.289 131.415 1.00 58.25 O
ATOM 24 OP2 G A 94 76.122 -2.980 131.247 1.00 58.10 O
ATOM 25 O5' G A 94 76.377 -4.125 133.464 1.00 59.24 O
TER
ATOM 1 O3' U B 63 78.385 13.103 137.196 1.00 63.84 O
ATOM 2 P A B 64 79.871 12.546 137.037 1.00 64.33 P
ATOM 3 OP1 A B 64 80.766 13.523 137.705 1.00 65.34 O
ATOM 4 OP2 A B 64 80.085 12.255 135.597 1.00 63.43 O
ATOM 5 O5' A B 64 79.823 11.187 137.852 1.00 64.45 O
ATOM 6 C5' A B 64 79.320 11.138 139.165 1.00 65.10 C
ATOM 7 C4' A B 64 79.107 9.719 139.592 1.00 64.92 C
ATOM 8 O4' A B 64 78.018 9.140 138.829 1.00 63.94 O
ATOM 9 C3' A B 64 80.255 8.774 139.332 1.00 64.89 C
ATOM 10 O3' A B 64 81.308 8.898 140.278 1.00 65.89 O
ATOM 11 C2' A B 64 79.566 7.403 139.321 1.00 64.31 C
ATOM 12 O2' A B 64 79.340 6.929 140.626 1.00 64.96 O
ATOM 13 C1' A B 64 78.214 7.740 138.693 1.00 63.56 C
ATOM 14 N9 A B 64 78.188 7.371 137.256 1.00 62.57 N
ATOM 15 C8 A B 64 78.194 8.112 136.093 1.00 62.04 C
ATOM 16 N7 A B 64 78.262 7.377 135.006 1.00 61.23 N
ATOM 17 C5 A B 64 78.331 6.094 135.505 1.00 61.26 C
ATOM 18 C6 A B 64 78.426 4.866 134.876 1.00 60.66 C
ATOM 19 N6 A B 64 78.452 4.742 133.551 1.00 59.87 N
ATOM 20 N1 A B 64 78.459 3.766 135.644 1.00 60.90 N
ATOM 21 C2 A B 64 78.437 3.929 136.967 1.00 61.71 C
ATOM 22 N3 A B 64 78.353 5.025 137.688 1.00 62.36 N
ATOM 23 C4 A B 64 78.290 6.072 136.868 1.00 62.07 C
ATOM 24 P A B 65 82.841 8.685 139.825 1.00 68.85 P
ATOM 25 OP1 A B 65 83.681 8.973 141.003 1.00 70.00 O
ATOM 26 OP2 A B 65 83.059 9.469 138.586 1.00 68.35 O
ATOM 27 O5' A B 65 82.904 7.139 139.492 1.00 68.28 O
TER
ATOM 2 P C A 93 80.971 -3.200 127.704 1.00 54.21 P
ATOM 3 OP1 C A 93 81.073 -4.672 127.858 1.00 54.16 O
ATOM 4 OP2 C A 93 80.263 -2.646 126.522 1.00 53.45 O
ATOM 5 O5' C A 93 80.401 -2.550 129.017 1.00 54.75 O
ATOM 6 C5' C A 93 80.842 -2.997 130.275 1.00 55.50 C
ATOM 7 C4' C A 93 80.303 -2.132 131.368 1.00 56.00 C
ATOM 8 O4' C A 93 80.601 -0.761 131.079 1.00 56.14 O
ATOM 9 C3' C A 93 78.801 -2.145 131.556 1.00 55.61 C
ATOM 10 O3' C A 93 78.368 -3.288 132.276 1.00 55.71 O
ATOM 11 C2' C A 93 78.556 -0.816 132.284 1.00 56.11 C
ATOM 12 O2' C A 93 78.811 -0.935 133.698 1.00 56.96 O
ATOM 13 C1' C A 93 79.644 0.068 131.663 1.00 56.26 C
ATOM 14 N1 C A 93 79.153 0.938 130.630 1.00 55.68 N
ATOM 15 C2 C A 93 78.478 2.085 130.990 1.00 55.84 C
ATOM 16 O2 C A 93 78.247 2.280 132.189 1.00 56.46 O
ATOM 17 N3 C A 93 78.071 2.911 129.990 1.00 55.31 N
ATOM 18 C4 C A 93 78.354 2.608 128.714 1.00 54.68 C
ATOM 19 N4 C A 93 77.945 3.466 127.800 1.00 54.22 N
ATOM 20 C5 C A 93 79.069 1.440 128.333 1.00 54.52 C
ATOM 21 C6 C A 93 79.466 0.643 129.334 1.00 55.05 C
ATOM 22 P G A 94 76.944 -3.960 131.996 1.00 58.63 P
ATOM 23 OP1 G A 94 77.192 -5.289 131.415 1.00 58.25 O
ATOM 24 OP2 G A 94 76.122 -2.980 131.247 1.00 58.10 O
ATOM 25 O5' G A 94 76.377 -4.125 133.464 1.00 59.24 O
TER
ATOM 1 O3' U B 63 78.385 13.103 137.196 1.00 63.84 O
ATOM 2 P A B 64 79.871 12.546 137.037 1.00 64.33 P
ATOM 3 OP1 A B 64 80.766 13.523 137.705 1.00 65.34 O
ATOM 4 OP2 A B 64 80.085 12.255 135.597 1.00 63.43 O
ATOM 5 O5' A B 64 79.823 11.187 137.852 1.00 64.45 O
ATOM 6 C5' A B 64 79.320 11.138 139.165 1.00 65.10 C
ATOM 7 C4' A B 64 79.107 9.719 139.592 1.00 64.92 C
ATOM 8 O4' A B 64 78.018 9.140 138.829 1.00 63.94 O
ATOM 9 C3' A B 64 80.255 8.774 139.332 1.00 64.89 C
ATOM 10 O3' A B 64 81.308 8.898 140.278 1.00 65.89 O
ATOM 11 C2' A B 64 79.566 7.403 139.321 1.00 64.31 C
ATOM 12 O2' A B 64 79.340 6.929 140.626 1.00 64.96 O
ATOM 13 C1' A B 64 78.214 7.740 138.693 1.00 63.56 C
ATOM 14 N9 A B 64 78.188 7.371 137.256 1.00 62.57 N
ATOM 15 C8 A B 64 78.194 8.112 136.093 1.00 62.04 C
ATOM 16 N7 A B 64 78.262 7.377 135.006 1.00 61.23 N
ATOM 17 C5 A B 64 78.331 6.094 135.505 1.00 61.26 C
ATOM 18 C6 A B 64 78.426 4.866 134.876 1.00 60.66 C
ATOM 19 N6 A B 64 78.452 4.742 133.551 1.00 59.87 N
ATOM 20 N1 A B 64 78.459 3.766 135.644 1.00 60.90 N
ATOM 21 C2 A B 64 78.437 3.929 136.967 1.00 61.71 C
ATOM 22 N3 A B 64 78.353 5.025 137.688 1.00 62.36 N
ATOM 23 C4 A B 64 78.290 6.072 136.868 1.00 62.07 C
ATOM 24 P A B 65 82.841 8.685 139.825 1.00 68.85 P
ATOM 25 OP1 A B 65 83.681 8.973 141.003 1.00 70.00 O
ATOM 26 OP2 A B 65 83.059 9.469 138.586 1.00 68.35 O
ATOM 27 O5' A B 65 82.904 7.139 139.492 1.00 68.28 O
TER
Atoms:
C2: (78.478,2.085,130.990)
OP1: (81.073,-4.672,127.858)
OP2: (80.263,-2.646,126.522)
C4: (78.354,2.608,128.714)
O5': (80.401,-2.550,129.017)
C3': (78.801,-2.145,131.556)
C1': (79.644,0.068,131.663)
O4': (80.601,-0.761,131.079)
C5': (80.842,-2.997,130.275)
P: (80.971,-3.200,127.704)
O2: (78.247,2.280,132.189)
C4': (80.303,-2.132,131.368)
C2': (78.556,-0.816,132.284)
O2': (78.811,-0.935,133.698)
N1: (79.153,0.938,130.630)
N3: (78.071,2.911,129.990)
N4: (77.945,3.466,127.800)
C6: (79.466,0.643,129.334)
C5: (79.069,1.440,128.333)
O3': (78.368,-3.288,132.276)
OP1: (81.073,-4.672,127.858)
OP2: (80.263,-2.646,126.522)
C4: (78.354,2.608,128.714)
O5': (80.401,-2.550,129.017)
C3': (78.801,-2.145,131.556)
C1': (79.644,0.068,131.663)
O4': (80.601,-0.761,131.079)
C5': (80.842,-2.997,130.275)
P: (80.971,-3.200,127.704)
O2: (78.247,2.280,132.189)
C4': (80.303,-2.132,131.368)
C2': (78.556,-0.816,132.284)
O2': (78.811,-0.935,133.698)
N1: (79.153,0.938,130.630)
N3: (78.071,2.911,129.990)
N4: (77.945,3.466,127.800)
C6: (79.466,0.643,129.334)
C5: (79.069,1.440,128.333)
O3': (78.368,-3.288,132.276)
OP1: (80.766,13.523,137.705)
OP2: (80.085,12.255,135.597)
C3': (80.255,8.774,139.332)
C1': (78.214,7.740,138.693)
C5': (79.320,11.138,139.165)
O4': (78.018,9.140,138.829)
C8: (78.194,8.112,136.093)
O2': (79.340,6.929,140.626)
C6: (78.426,4.866,134.876)
C5: (78.331,6.094,135.505)
C4: (78.290,6.072,136.868)
P: (79.871,12.546,137.037)
C4': (79.107,9.719,139.592)
C2': (79.566,7.403,139.321)
C2: (78.437,3.929,136.967)
N1: (78.459,3.766,135.644)
N3: (78.353,5.025,137.688)
N6: (78.452,4.742,133.551)
N7: (78.262,7.377,135.006)
N9: (78.188,7.371,137.256)
O5': (79.823,11.187,137.852)
O3': (81.308,8.898,140.278)
OP2: (80.085,12.255,135.597)
C3': (80.255,8.774,139.332)
C1': (78.214,7.740,138.693)
C5': (79.320,11.138,139.165)
O4': (78.018,9.140,138.829)
C8: (78.194,8.112,136.093)
O2': (79.340,6.929,140.626)
C6: (78.426,4.866,134.876)
C5: (78.331,6.094,135.505)
C4: (78.290,6.072,136.868)
P: (79.871,12.546,137.037)
C4': (79.107,9.719,139.592)
C2': (79.566,7.403,139.321)
C2: (78.437,3.929,136.967)
N1: (78.459,3.766,135.644)
N3: (78.353,5.025,137.688)
N6: (78.452,4.742,133.551)
N7: (78.262,7.377,135.006)
N9: (78.188,7.371,137.256)
O5': (79.823,11.187,137.852)
O3': (81.308,8.898,140.278)
Image (generated by PyMOL):