ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:V48:V14

Extra

PDB:
ATOM 1 O3' U A 47 -132.299 -14.889 11.353 1.00199.79 O
ATOM 2 P C A 48 -131.125 -15.923 11.700 1.00134.82 P
ATOM 3 OP1 C A 48 -130.975 -16.853 10.546 1.00105.70 O
ATOM 4 OP2 C A 48 -131.414 -16.471 13.048 1.00105.70 O
ATOM 5 O5' C A 48 -129.820 -15.014 11.807 1.00 51.92 O
ATOM 6 C5' C A 48 -129.068 -14.656 10.637 1.00 51.92 C
ATOM 7 C4' C A 48 -127.599 -14.527 10.976 1.00 51.92 C
ATOM 8 O4' C A 48 -127.433 -13.463 11.946 1.00 51.92 O
ATOM 9 C3' C A 48 -126.924 -15.766 11.563 1.00 51.92 C
ATOM 10 O3' C A 48 -125.601 -15.895 11.035 1.00 51.92 O
ATOM 11 C2' C A 48 -126.882 -15.471 13.059 1.00 51.92 C
ATOM 12 O2' C A 48 -125.773 -16.050 13.713 1.00 51.92 O
ATOM 13 C1' C A 48 -126.759 -13.953 13.083 1.00 51.92 C
ATOM 14 N1 C A 48 -127.380 -13.360 14.273 1.00 36.06 N
ATOM 15 C2 C A 48 -126.579 -13.071 15.386 1.00 36.06 C
ATOM 16 O2 C A 48 -125.369 -13.358 15.359 1.00 36.06 O
ATOM 17 N3 C A 48 -127.138 -12.495 16.463 1.00 36.06 N
ATOM 18 C4 C A 48 -128.441 -12.217 16.470 1.00 36.06 C
ATOM 19 N4 C A 48 -128.947 -11.631 17.560 1.00 36.06 N
ATOM 20 C5 C A 48 -129.283 -12.520 15.363 1.00 36.06 C
ATOM 21 C6 C A 48 -128.717 -13.085 14.297 1.00 36.06 C
ATOM 22 P G A 49 -125.018 -17.356 10.691 1.00 49.48 P
ATOM 23 OP1 G A 49 -126.158 -18.222 10.266 1.00 45.10 O
ATOM 24 OP2 G A 49 -124.167 -17.769 11.838 1.00 45.10 O
ATOM 25 O5' G A 49 -124.065 -17.132 9.430 1.00 88.35 O
TER

ATOM 1 O3' A B 13 -116.256 -9.896 21.625 1.00 44.92 O
ATOM 2 P G B 14 -116.690 -11.312 22.243 1.00 51.82 P
ATOM 3 OP1 G B 14 -116.029 -11.419 23.583 1.00 28.95 O
ATOM 4 OP2 G B 14 -116.467 -12.378 21.216 1.00 28.95 O
ATOM 5 O5' G B 14 -118.257 -11.146 22.476 1.00 62.74 O
ATOM 6 C5' G B 14 -118.761 -10.226 23.463 1.00 62.74 C
ATOM 7 C4' G B 14 -120.270 -10.185 23.418 1.00 62.74 C
ATOM 8 O4' G B 14 -120.702 -9.656 22.141 1.00 62.74 O
ATOM 9 C3' G B 14 -120.976 -11.527 23.545 1.00 62.74 C
ATOM 10 O3' G B 14 -121.164 -11.855 24.917 1.00 62.74 O
ATOM 11 C2' G B 14 -122.310 -11.276 22.843 1.00 62.74 C
ATOM 12 O2' G B 14 -123.283 -10.680 23.678 1.00 62.74 O
ATOM 13 C1' G B 14 -121.919 -10.267 21.760 1.00 62.74 C
ATOM 14 N9 G B 14 -121.750 -10.869 20.444 1.00 28.72 N
ATOM 15 C8 G B 14 -120.570 -11.188 19.819 1.00 28.72 C
ATOM 16 N7 G B 14 -120.744 -11.736 18.647 1.00 28.72 N
ATOM 17 C5 G B 14 -122.124 -11.785 18.491 1.00 28.72 C
ATOM 18 C6 G B 14 -122.919 -12.298 17.421 1.00 28.72 C
ATOM 19 O6 G B 14 -122.546 -12.864 16.378 1.00 28.72 O
ATOM 20 N1 G B 14 -124.278 -12.113 17.665 1.00 28.72 N
ATOM 21 C2 G B 14 -124.806 -11.528 18.792 1.00 28.72 C
ATOM 22 N2 G B 14 -126.141 -11.397 18.832 1.00 28.72 N
ATOM 23 N3 G B 14 -124.079 -11.089 19.806 1.00 28.72 N
ATOM 24 C4 G B 14 -122.757 -11.241 19.587 1.00 28.72 C
ATOM 25 P C B 15 -120.588 -13.237 25.499 1.00 81.14 P
ATOM 26 OP1 C B 15 -121.023 -13.297 26.916 1.00 86.88 O
ATOM 27 OP2 C B 15 -119.141 -13.322 25.176 1.00 86.88 O
ATOM 28 O5' C B 15 -121.362 -14.371 24.686 1.00 56.53 O
TER

Atoms:
C2: (-126.579,-13.071,15.386)
OP1: (-130.975,-16.853,10.546)
OP2: (-131.414,-16.471,13.048)
C4: (-128.441,-12.217,16.470)
O5': (-129.820,-15.014,11.807)
C3': (-126.924,-15.766,11.563)
C1': (-126.759,-13.953,13.083)
O4': (-127.433,-13.463,11.946)
C5': (-129.068,-14.656,10.637)
P: (-131.125,-15.923,11.700)
O2: (-125.369,-13.358,15.359)
C4': (-127.599,-14.527,10.976)
C2': (-126.882,-15.471,13.059)
O2': (-125.773,-16.050,13.713)
N1: (-127.380,-13.360,14.273)
N3: (-127.138,-12.495,16.463)
N4: (-128.947,-11.631,17.560)
C6: (-128.717,-13.085,14.297)
C5: (-129.283,-12.520,15.363)
O3': (-125.601,-15.895,11.035)
OP1: (-116.029,-11.419,23.583)
OP2: (-116.467,-12.378,21.216)
C3': (-120.976,-11.527,23.545)
C1': (-121.919,-10.267,21.760)
C5': (-118.761,-10.226,23.463)
O6: (-122.546,-12.864,16.378)
O4': (-120.702,-9.656,22.141)
C8: (-120.570,-11.188,19.819)
C2: (-124.806,-11.528,18.792)
C6: (-122.919,-12.298,17.421)
C5: (-122.124,-11.785,18.491)
C4: (-122.757,-11.241,19.587)
P: (-116.690,-11.312,22.243)
C4': (-120.270,-10.185,23.418)
C2': (-122.310,-11.276,22.843)
O2': (-123.283,-10.680,23.678)
N1: (-124.278,-12.113,17.665)
N2: (-126.141,-11.397,18.832)
N3: (-124.079,-11.089,19.806)
N7: (-120.744,-11.736,18.647)
N9: (-121.750,-10.869,20.444)
O5': (-118.257,-11.146,22.476)
O3': (-121.164,-11.855,24.917)
Image (generated by PyMOL):
PyMOL image
show in jmol