Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2352:A2406
Extra
PDB:
ATOM 1 O3' C A2351 -133.154 -44.683 -40.437 1.00 80.59 O
ATOM 2 P C A2352 -133.276 -45.446 -39.028 1.00199.79 P
ATOM 3 OP1 C A2352 -134.712 -45.456 -38.638 1.00155.94 O
ATOM 4 OP2 C A2352 -132.266 -44.873 -38.094 1.00155.92 O
ATOM 5 O5' C A2352 -132.857 -46.943 -39.369 1.00139.85 O
ATOM 6 C5' C A2352 -132.248 -47.771 -38.372 1.00139.85 C
ATOM 7 C4' C A2352 -131.050 -48.482 -38.946 1.00139.85 C
ATOM 8 O4' C A2352 -130.274 -47.564 -39.746 1.00139.85 O
ATOM 9 C3' C A2352 -130.091 -49.024 -37.901 1.00139.85 C
ATOM 10 O3' C A2352 -130.495 -50.346 -37.539 1.00139.85 O
ATOM 11 C2' C A2352 -128.742 -49.034 -38.628 1.00139.85 C
ATOM 12 O2' C A2352 -128.506 -50.238 -39.327 1.00139.85 O
ATOM 13 C1' C A2352 -128.906 -47.908 -39.658 1.00139.85 C
ATOM 14 N1 C A2352 -128.099 -46.674 -39.513 1.00 77.46 N
ATOM 15 C2 C A2352 -126.728 -46.700 -39.855 1.00 77.50 C
ATOM 16 O2 C A2352 -126.202 -47.777 -40.179 1.00 77.54 O
ATOM 17 N3 C A2352 -126.015 -45.548 -39.812 1.00 77.51 N
ATOM 18 C4 C A2352 -126.605 -44.409 -39.431 1.00 77.49 C
ATOM 19 N4 C A2352 -125.874 -43.289 -39.433 1.00 77.50 N
ATOM 20 C5 C A2352 -127.976 -44.364 -39.035 1.00 77.47 C
ATOM 21 C6 C A2352 -128.677 -45.507 -39.088 1.00 77.43 C
ATOM 22 P A A2353 -131.427 -50.585 -36.248 1.00199.65 P
ATOM 23 OP1 A A2353 -131.981 -51.961 -36.384 1.00199.65 O
ATOM 24 OP2 A A2353 -132.356 -49.437 -36.092 1.00199.65 O
ATOM 25 O5' A A2353 -130.413 -50.557 -35.016 1.00199.28 O
TER
ATOM 1 O3' U B2405 -118.292 -50.145 -44.384 1.00 36.72 O
ATOM 2 P G B2406 -118.475 -49.580 -45.873 1.00 38.88 P
ATOM 3 OP1 G B2406 -119.650 -50.322 -46.418 1.00 29.56 O
ATOM 4 OP2 G B2406 -117.168 -49.606 -46.605 1.00 29.58 O
ATOM 5 O5' G B2406 -118.871 -48.055 -45.631 1.00 41.26 O
ATOM 6 C5' G B2406 -118.030 -46.964 -46.094 1.00 41.26 C
ATOM 7 C4' G B2406 -117.834 -45.956 -44.987 1.00 41.26 C
ATOM 8 O4' G B2406 -119.114 -45.718 -44.357 1.00 41.26 O
ATOM 9 C3' G B2406 -116.922 -46.436 -43.879 1.00 41.26 C
ATOM 10 O3' G B2406 -115.618 -45.958 -44.168 1.00 41.26 O
ATOM 11 C2' G B2406 -117.472 -45.746 -42.640 1.00 41.26 C
ATOM 12 O2' G B2406 -116.966 -44.436 -42.526 1.00 41.26 O
ATOM 13 C1' G B2406 -118.966 -45.655 -42.956 1.00 41.26 C
ATOM 14 N9 G B2406 -119.831 -46.682 -42.382 1.00 45.99 N
ATOM 15 C8 G B2406 -119.721 -48.045 -42.532 1.00 46.04 C
ATOM 16 N7 G B2406 -120.703 -48.703 -41.975 1.00 46.06 N
ATOM 17 C5 G B2406 -121.501 -47.718 -41.405 1.00 46.06 C
ATOM 18 C6 G B2406 -122.730 -47.820 -40.683 1.00 46.08 C
ATOM 19 O6 G B2406 -123.386 -48.828 -40.407 1.00 46.06 O
ATOM 20 N1 G B2406 -123.191 -46.575 -40.283 1.00 46.07 N
ATOM 21 C2 G B2406 -122.570 -45.382 -40.544 1.00 46.03 C
ATOM 22 N2 G B2406 -123.180 -44.297 -40.067 1.00 46.04 N
ATOM 23 N3 G B2406 -121.435 -45.265 -41.224 1.00 46.00 N
ATOM 24 C4 G B2406 -120.962 -46.466 -41.623 1.00 46.01 C
ATOM 25 P A B2407 -114.337 -46.817 -43.739 1.00 43.04 P
ATOM 26 OP1 A B2407 -114.504 -47.163 -42.299 1.00 42.96 O
ATOM 27 OP2 A B2407 -113.120 -46.083 -44.183 1.00 43.07 O
ATOM 28 O5' A B2407 -114.467 -48.139 -44.622 1.00 60.10 O
TER
ATOM 2 P C A2352 -133.276 -45.446 -39.028 1.00199.79 P
ATOM 3 OP1 C A2352 -134.712 -45.456 -38.638 1.00155.94 O
ATOM 4 OP2 C A2352 -132.266 -44.873 -38.094 1.00155.92 O
ATOM 5 O5' C A2352 -132.857 -46.943 -39.369 1.00139.85 O
ATOM 6 C5' C A2352 -132.248 -47.771 -38.372 1.00139.85 C
ATOM 7 C4' C A2352 -131.050 -48.482 -38.946 1.00139.85 C
ATOM 8 O4' C A2352 -130.274 -47.564 -39.746 1.00139.85 O
ATOM 9 C3' C A2352 -130.091 -49.024 -37.901 1.00139.85 C
ATOM 10 O3' C A2352 -130.495 -50.346 -37.539 1.00139.85 O
ATOM 11 C2' C A2352 -128.742 -49.034 -38.628 1.00139.85 C
ATOM 12 O2' C A2352 -128.506 -50.238 -39.327 1.00139.85 O
ATOM 13 C1' C A2352 -128.906 -47.908 -39.658 1.00139.85 C
ATOM 14 N1 C A2352 -128.099 -46.674 -39.513 1.00 77.46 N
ATOM 15 C2 C A2352 -126.728 -46.700 -39.855 1.00 77.50 C
ATOM 16 O2 C A2352 -126.202 -47.777 -40.179 1.00 77.54 O
ATOM 17 N3 C A2352 -126.015 -45.548 -39.812 1.00 77.51 N
ATOM 18 C4 C A2352 -126.605 -44.409 -39.431 1.00 77.49 C
ATOM 19 N4 C A2352 -125.874 -43.289 -39.433 1.00 77.50 N
ATOM 20 C5 C A2352 -127.976 -44.364 -39.035 1.00 77.47 C
ATOM 21 C6 C A2352 -128.677 -45.507 -39.088 1.00 77.43 C
ATOM 22 P A A2353 -131.427 -50.585 -36.248 1.00199.65 P
ATOM 23 OP1 A A2353 -131.981 -51.961 -36.384 1.00199.65 O
ATOM 24 OP2 A A2353 -132.356 -49.437 -36.092 1.00199.65 O
ATOM 25 O5' A A2353 -130.413 -50.557 -35.016 1.00199.28 O
TER
ATOM 1 O3' U B2405 -118.292 -50.145 -44.384 1.00 36.72 O
ATOM 2 P G B2406 -118.475 -49.580 -45.873 1.00 38.88 P
ATOM 3 OP1 G B2406 -119.650 -50.322 -46.418 1.00 29.56 O
ATOM 4 OP2 G B2406 -117.168 -49.606 -46.605 1.00 29.58 O
ATOM 5 O5' G B2406 -118.871 -48.055 -45.631 1.00 41.26 O
ATOM 6 C5' G B2406 -118.030 -46.964 -46.094 1.00 41.26 C
ATOM 7 C4' G B2406 -117.834 -45.956 -44.987 1.00 41.26 C
ATOM 8 O4' G B2406 -119.114 -45.718 -44.357 1.00 41.26 O
ATOM 9 C3' G B2406 -116.922 -46.436 -43.879 1.00 41.26 C
ATOM 10 O3' G B2406 -115.618 -45.958 -44.168 1.00 41.26 O
ATOM 11 C2' G B2406 -117.472 -45.746 -42.640 1.00 41.26 C
ATOM 12 O2' G B2406 -116.966 -44.436 -42.526 1.00 41.26 O
ATOM 13 C1' G B2406 -118.966 -45.655 -42.956 1.00 41.26 C
ATOM 14 N9 G B2406 -119.831 -46.682 -42.382 1.00 45.99 N
ATOM 15 C8 G B2406 -119.721 -48.045 -42.532 1.00 46.04 C
ATOM 16 N7 G B2406 -120.703 -48.703 -41.975 1.00 46.06 N
ATOM 17 C5 G B2406 -121.501 -47.718 -41.405 1.00 46.06 C
ATOM 18 C6 G B2406 -122.730 -47.820 -40.683 1.00 46.08 C
ATOM 19 O6 G B2406 -123.386 -48.828 -40.407 1.00 46.06 O
ATOM 20 N1 G B2406 -123.191 -46.575 -40.283 1.00 46.07 N
ATOM 21 C2 G B2406 -122.570 -45.382 -40.544 1.00 46.03 C
ATOM 22 N2 G B2406 -123.180 -44.297 -40.067 1.00 46.04 N
ATOM 23 N3 G B2406 -121.435 -45.265 -41.224 1.00 46.00 N
ATOM 24 C4 G B2406 -120.962 -46.466 -41.623 1.00 46.01 C
ATOM 25 P A B2407 -114.337 -46.817 -43.739 1.00 43.04 P
ATOM 26 OP1 A B2407 -114.504 -47.163 -42.299 1.00 42.96 O
ATOM 27 OP2 A B2407 -113.120 -46.083 -44.183 1.00 43.07 O
ATOM 28 O5' A B2407 -114.467 -48.139 -44.622 1.00 60.10 O
TER
Atoms:
C2: (-126.728,-46.700,-39.855)
OP1: (-134.712,-45.456,-38.638)
OP2: (-132.266,-44.873,-38.094)
C4: (-126.605,-44.409,-39.431)
O5': (-132.857,-46.943,-39.369)
C3': (-130.091,-49.024,-37.901)
C1': (-128.906,-47.908,-39.658)
O4': (-130.274,-47.564,-39.746)
C5': (-132.248,-47.771,-38.372)
P: (-133.276,-45.446,-39.028)
O2: (-126.202,-47.777,-40.179)
C4': (-131.050,-48.482,-38.946)
C2': (-128.742,-49.034,-38.628)
O2': (-128.506,-50.238,-39.327)
N1: (-128.099,-46.674,-39.513)
N3: (-126.015,-45.548,-39.812)
N4: (-125.874,-43.289,-39.433)
C6: (-128.677,-45.507,-39.088)
C5: (-127.976,-44.364,-39.035)
O3': (-130.495,-50.346,-37.539)
OP1: (-134.712,-45.456,-38.638)
OP2: (-132.266,-44.873,-38.094)
C4: (-126.605,-44.409,-39.431)
O5': (-132.857,-46.943,-39.369)
C3': (-130.091,-49.024,-37.901)
C1': (-128.906,-47.908,-39.658)
O4': (-130.274,-47.564,-39.746)
C5': (-132.248,-47.771,-38.372)
P: (-133.276,-45.446,-39.028)
O2: (-126.202,-47.777,-40.179)
C4': (-131.050,-48.482,-38.946)
C2': (-128.742,-49.034,-38.628)
O2': (-128.506,-50.238,-39.327)
N1: (-128.099,-46.674,-39.513)
N3: (-126.015,-45.548,-39.812)
N4: (-125.874,-43.289,-39.433)
C6: (-128.677,-45.507,-39.088)
C5: (-127.976,-44.364,-39.035)
O3': (-130.495,-50.346,-37.539)
OP1: (-119.650,-50.322,-46.418)
OP2: (-117.168,-49.606,-46.605)
C3': (-116.922,-46.436,-43.879)
C1': (-118.966,-45.655,-42.956)
C5': (-118.030,-46.964,-46.094)
O6: (-123.386,-48.828,-40.407)
O4': (-119.114,-45.718,-44.357)
C8: (-119.721,-48.045,-42.532)
C2: (-122.570,-45.382,-40.544)
C6: (-122.730,-47.820,-40.683)
C5: (-121.501,-47.718,-41.405)
C4: (-120.962,-46.466,-41.623)
P: (-118.475,-49.580,-45.873)
C4': (-117.834,-45.956,-44.987)
C2': (-117.472,-45.746,-42.640)
O2': (-116.966,-44.436,-42.526)
N1: (-123.191,-46.575,-40.283)
N2: (-123.180,-44.297,-40.067)
N3: (-121.435,-45.265,-41.224)
N7: (-120.703,-48.703,-41.975)
N9: (-119.831,-46.682,-42.382)
O5': (-118.871,-48.055,-45.631)
O3': (-115.618,-45.958,-44.168)
OP2: (-117.168,-49.606,-46.605)
C3': (-116.922,-46.436,-43.879)
C1': (-118.966,-45.655,-42.956)
C5': (-118.030,-46.964,-46.094)
O6: (-123.386,-48.828,-40.407)
O4': (-119.114,-45.718,-44.357)
C8: (-119.721,-48.045,-42.532)
C2: (-122.570,-45.382,-40.544)
C6: (-122.730,-47.820,-40.683)
C5: (-121.501,-47.718,-41.405)
C4: (-120.962,-46.466,-41.623)
P: (-118.475,-49.580,-45.873)
C4': (-117.834,-45.956,-44.987)
C2': (-117.472,-45.746,-42.640)
O2': (-116.966,-44.436,-42.526)
N1: (-123.191,-46.575,-40.283)
N2: (-123.180,-44.297,-40.067)
N3: (-121.435,-45.265,-41.224)
N7: (-120.703,-48.703,-41.975)
N9: (-119.831,-46.682,-42.382)
O5': (-118.871,-48.055,-45.631)
O3': (-115.618,-45.958,-44.168)
Image (generated by PyMOL):