Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:9107:972
Extra
PDB:
ATOM 1 O3' C A 106 52.263 49.445 130.825 1.00 78.31 O
ATOM 2 P C A 107 52.255 47.874 130.473 1.00 79.83 P
ATOM 3 OP1 C A 107 52.958 47.188 131.592 1.00 79.79 O
ATOM 4 OP2 C A 107 52.721 47.658 129.076 1.00 78.76 O
ATOM 5 O5' C A 107 50.708 47.505 130.529 1.00 77.50 O
ATOM 6 C5' C A 107 49.977 47.618 131.757 1.00 75.79 C
ATOM 7 C4' C A 107 48.541 47.226 131.542 1.00 75.86 C
ATOM 8 O4' C A 107 47.859 48.247 130.767 1.00 75.54 O
ATOM 9 C3' C A 107 48.338 45.967 130.723 1.00 76.14 C
ATOM 10 O3' C A 107 48.557 44.775 131.454 1.00 76.42 O
ATOM 11 C2' C A 107 46.909 46.137 130.233 1.00 76.33 C
ATOM 12 O2' C A 107 45.936 45.828 131.211 1.00 76.72 O
ATOM 13 C1' C A 107 46.891 47.636 129.925 1.00 75.71 C
ATOM 14 N1 C A 107 47.256 47.892 128.520 1.00 75.45 N
ATOM 15 C2 C A 107 46.243 47.888 127.550 1.00 75.65 C
ATOM 16 O2 C A 107 45.066 47.703 127.905 1.00 75.74 O
ATOM 17 N3 C A 107 46.571 48.084 126.252 1.00 75.03 N
ATOM 18 C4 C A 107 47.844 48.283 125.908 1.00 74.55 C
ATOM 19 N4 C A 107 48.119 48.457 124.616 1.00 75.02 N
ATOM 20 C5 C A 107 48.892 48.311 126.875 1.00 74.68 C
ATOM 21 C6 C A 107 48.557 48.113 128.156 1.00 74.80 C
ATOM 22 P G A 108 48.984 43.442 130.667 1.00 78.22 P
ATOM 23 OP1 G A 108 49.275 42.396 131.678 1.00 79.86 O
ATOM 24 OP2 G A 108 50.021 43.797 129.662 1.00 79.34 O
ATOM 25 O5' G A 108 47.655 43.030 129.894 1.00 78.27 O
TER
ATOM 1 O3' C B 71 39.282 47.671 116.926 1.00 81.43 O
ATOM 2 P A B 72 39.108 48.947 117.900 1.00 82.39 P
ATOM 3 OP1 A B 72 37.811 49.586 117.550 1.00 82.44 O
ATOM 4 OP2 A B 72 40.354 49.761 117.894 1.00 81.06 O
ATOM 5 O5' A B 72 38.979 48.307 119.353 1.00 82.17 O
ATOM 6 C5' A B 72 37.884 47.430 119.690 1.00 80.65 C
ATOM 7 C4' A B 72 37.922 47.095 121.163 1.00 79.81 C
ATOM 8 O4' A B 72 39.117 46.326 121.463 1.00 78.64 O
ATOM 9 C3' A B 72 38.017 48.290 122.095 1.00 80.40 C
ATOM 10 O3' A B 72 36.746 48.892 122.306 1.00 81.06 O
ATOM 11 C2' A B 72 38.612 47.676 123.358 1.00 79.75 C
ATOM 12 O2' A B 72 37.670 46.996 124.166 1.00 80.64 O
ATOM 13 C1' A B 72 39.581 46.652 122.765 1.00 77.63 C
ATOM 14 N9 A B 72 40.960 47.132 122.667 1.00 76.03 N
ATOM 15 C8 A B 72 41.625 47.597 121.558 1.00 75.80 C
ATOM 16 N7 A B 72 42.870 47.936 121.793 1.00 75.49 N
ATOM 17 C5 A B 72 43.036 47.682 123.147 1.00 74.48 C
ATOM 18 C6 A B 72 44.137 47.828 124.010 1.00 73.96 C
ATOM 19 N6 A B 72 45.331 48.277 123.619 1.00 73.92 N
ATOM 20 N1 A B 72 43.968 47.489 125.305 1.00 73.40 N
ATOM 21 C2 A B 72 42.775 47.034 125.697 1.00 73.60 C
ATOM 22 N3 A B 72 41.668 46.848 124.983 1.00 74.20 N
ATOM 23 C4 A B 72 41.867 47.194 123.700 1.00 74.96 C
ATOM 24 P G B 73 36.654 50.464 122.621 1.00 81.75 P
ATOM 25 OP1 G B 73 35.209 50.787 122.788 1.00 80.79 O
ATOM 26 OP2 G B 73 37.454 51.184 121.592 1.00 80.98 O
ATOM 27 O5' G B 73 37.374 50.615 124.037 1.00 79.44 O
TER
ATOM 2 P C A 107 52.255 47.874 130.473 1.00 79.83 P
ATOM 3 OP1 C A 107 52.958 47.188 131.592 1.00 79.79 O
ATOM 4 OP2 C A 107 52.721 47.658 129.076 1.00 78.76 O
ATOM 5 O5' C A 107 50.708 47.505 130.529 1.00 77.50 O
ATOM 6 C5' C A 107 49.977 47.618 131.757 1.00 75.79 C
ATOM 7 C4' C A 107 48.541 47.226 131.542 1.00 75.86 C
ATOM 8 O4' C A 107 47.859 48.247 130.767 1.00 75.54 O
ATOM 9 C3' C A 107 48.338 45.967 130.723 1.00 76.14 C
ATOM 10 O3' C A 107 48.557 44.775 131.454 1.00 76.42 O
ATOM 11 C2' C A 107 46.909 46.137 130.233 1.00 76.33 C
ATOM 12 O2' C A 107 45.936 45.828 131.211 1.00 76.72 O
ATOM 13 C1' C A 107 46.891 47.636 129.925 1.00 75.71 C
ATOM 14 N1 C A 107 47.256 47.892 128.520 1.00 75.45 N
ATOM 15 C2 C A 107 46.243 47.888 127.550 1.00 75.65 C
ATOM 16 O2 C A 107 45.066 47.703 127.905 1.00 75.74 O
ATOM 17 N3 C A 107 46.571 48.084 126.252 1.00 75.03 N
ATOM 18 C4 C A 107 47.844 48.283 125.908 1.00 74.55 C
ATOM 19 N4 C A 107 48.119 48.457 124.616 1.00 75.02 N
ATOM 20 C5 C A 107 48.892 48.311 126.875 1.00 74.68 C
ATOM 21 C6 C A 107 48.557 48.113 128.156 1.00 74.80 C
ATOM 22 P G A 108 48.984 43.442 130.667 1.00 78.22 P
ATOM 23 OP1 G A 108 49.275 42.396 131.678 1.00 79.86 O
ATOM 24 OP2 G A 108 50.021 43.797 129.662 1.00 79.34 O
ATOM 25 O5' G A 108 47.655 43.030 129.894 1.00 78.27 O
TER
ATOM 1 O3' C B 71 39.282 47.671 116.926 1.00 81.43 O
ATOM 2 P A B 72 39.108 48.947 117.900 1.00 82.39 P
ATOM 3 OP1 A B 72 37.811 49.586 117.550 1.00 82.44 O
ATOM 4 OP2 A B 72 40.354 49.761 117.894 1.00 81.06 O
ATOM 5 O5' A B 72 38.979 48.307 119.353 1.00 82.17 O
ATOM 6 C5' A B 72 37.884 47.430 119.690 1.00 80.65 C
ATOM 7 C4' A B 72 37.922 47.095 121.163 1.00 79.81 C
ATOM 8 O4' A B 72 39.117 46.326 121.463 1.00 78.64 O
ATOM 9 C3' A B 72 38.017 48.290 122.095 1.00 80.40 C
ATOM 10 O3' A B 72 36.746 48.892 122.306 1.00 81.06 O
ATOM 11 C2' A B 72 38.612 47.676 123.358 1.00 79.75 C
ATOM 12 O2' A B 72 37.670 46.996 124.166 1.00 80.64 O
ATOM 13 C1' A B 72 39.581 46.652 122.765 1.00 77.63 C
ATOM 14 N9 A B 72 40.960 47.132 122.667 1.00 76.03 N
ATOM 15 C8 A B 72 41.625 47.597 121.558 1.00 75.80 C
ATOM 16 N7 A B 72 42.870 47.936 121.793 1.00 75.49 N
ATOM 17 C5 A B 72 43.036 47.682 123.147 1.00 74.48 C
ATOM 18 C6 A B 72 44.137 47.828 124.010 1.00 73.96 C
ATOM 19 N6 A B 72 45.331 48.277 123.619 1.00 73.92 N
ATOM 20 N1 A B 72 43.968 47.489 125.305 1.00 73.40 N
ATOM 21 C2 A B 72 42.775 47.034 125.697 1.00 73.60 C
ATOM 22 N3 A B 72 41.668 46.848 124.983 1.00 74.20 N
ATOM 23 C4 A B 72 41.867 47.194 123.700 1.00 74.96 C
ATOM 24 P G B 73 36.654 50.464 122.621 1.00 81.75 P
ATOM 25 OP1 G B 73 35.209 50.787 122.788 1.00 80.79 O
ATOM 26 OP2 G B 73 37.454 51.184 121.592 1.00 80.98 O
ATOM 27 O5' G B 73 37.374 50.615 124.037 1.00 79.44 O
TER
Atoms:
C2: (46.243,47.888,127.550)
OP1: (52.958,47.188,131.592)
OP2: (52.721,47.658,129.076)
C4: (47.844,48.283,125.908)
O5': (50.708,47.505,130.529)
C3': (48.338,45.967,130.723)
C1': (46.891,47.636,129.925)
O4': (47.859,48.247,130.767)
C5': (49.977,47.618,131.757)
P: (52.255,47.874,130.473)
O2: (45.066,47.703,127.905)
C4': (48.541,47.226,131.542)
C2': (46.909,46.137,130.233)
O2': (45.936,45.828,131.211)
N1: (47.256,47.892,128.520)
N3: (46.571,48.084,126.252)
N4: (48.119,48.457,124.616)
C6: (48.557,48.113,128.156)
C5: (48.892,48.311,126.875)
O3': (48.557,44.775,131.454)
OP1: (52.958,47.188,131.592)
OP2: (52.721,47.658,129.076)
C4: (47.844,48.283,125.908)
O5': (50.708,47.505,130.529)
C3': (48.338,45.967,130.723)
C1': (46.891,47.636,129.925)
O4': (47.859,48.247,130.767)
C5': (49.977,47.618,131.757)
P: (52.255,47.874,130.473)
O2: (45.066,47.703,127.905)
C4': (48.541,47.226,131.542)
C2': (46.909,46.137,130.233)
O2': (45.936,45.828,131.211)
N1: (47.256,47.892,128.520)
N3: (46.571,48.084,126.252)
N4: (48.119,48.457,124.616)
C6: (48.557,48.113,128.156)
C5: (48.892,48.311,126.875)
O3': (48.557,44.775,131.454)
OP1: (37.811,49.586,117.550)
OP2: (40.354,49.761,117.894)
C3': (38.017,48.290,122.095)
C1': (39.581,46.652,122.765)
C5': (37.884,47.430,119.690)
O4': (39.117,46.326,121.463)
C8: (41.625,47.597,121.558)
O2': (37.670,46.996,124.166)
C6: (44.137,47.828,124.010)
C5: (43.036,47.682,123.147)
C4: (41.867,47.194,123.700)
P: (39.108,48.947,117.900)
C4': (37.922,47.095,121.163)
C2': (38.612,47.676,123.358)
C2: (42.775,47.034,125.697)
N1: (43.968,47.489,125.305)
N3: (41.668,46.848,124.983)
N6: (45.331,48.277,123.619)
N7: (42.870,47.936,121.793)
N9: (40.960,47.132,122.667)
O5': (38.979,48.307,119.353)
O3': (36.746,48.892,122.306)
OP2: (40.354,49.761,117.894)
C3': (38.017,48.290,122.095)
C1': (39.581,46.652,122.765)
C5': (37.884,47.430,119.690)
O4': (39.117,46.326,121.463)
C8: (41.625,47.597,121.558)
O2': (37.670,46.996,124.166)
C6: (44.137,47.828,124.010)
C5: (43.036,47.682,123.147)
C4: (41.867,47.194,123.700)
P: (39.108,48.947,117.900)
C4': (37.922,47.095,121.163)
C2': (38.612,47.676,123.358)
C2: (42.775,47.034,125.697)
N1: (43.968,47.489,125.305)
N3: (41.668,46.848,124.983)
N6: (45.331,48.277,123.619)
N7: (42.870,47.936,121.793)
N9: (40.960,47.132,122.667)
O5': (38.979,48.307,119.353)
O3': (36.746,48.892,122.306)
Image (generated by PyMOL):