Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:030:0430
Extra
PDB:
ATOM 1 O3' G A 29 48.210 125.053 22.972 1.00 64.69 O
ATOM 2 P C A 30 49.731 124.848 22.461 1.00 65.90 P
ATOM 3 OP1 C A 30 49.688 124.993 20.986 1.00 64.67 O
ATOM 4 OP2 C A 30 50.308 123.611 23.053 1.00 63.71 O
ATOM 5 O5' C A 30 50.532 126.095 23.063 1.00 65.45 O
ATOM 6 C5' C A 30 50.186 127.456 22.705 1.00 64.66 C
ATOM 7 C4' C A 30 50.865 128.448 23.636 1.00 63.73 C
ATOM 8 O4' C A 30 50.422 128.229 25.004 1.00 63.60 O
ATOM 9 C3' C A 30 52.381 128.374 23.720 1.00 62.53 C
ATOM 10 O3' C A 30 53.011 129.096 22.674 1.00 60.69 O
ATOM 11 C2' C A 30 52.661 129.010 25.072 1.00 62.73 C
ATOM 12 O2' C A 30 52.599 130.423 25.010 1.00 62.05 O
ATOM 13 C1' C A 30 51.499 128.458 25.903 1.00 63.14 C
ATOM 14 N1 C A 30 51.816 127.175 26.570 1.00 64.01 N
ATOM 15 C2 C A 30 52.360 127.181 27.870 1.00 63.60 C
ATOM 16 O2 C A 30 52.568 128.265 28.441 1.00 62.66 O
ATOM 17 N3 C A 30 52.643 125.999 28.468 1.00 64.04 N
ATOM 18 C4 C A 30 52.408 124.851 27.825 1.00 65.19 C
ATOM 19 N4 C A 30 52.702 123.708 28.447 1.00 65.34 N
ATOM 20 C5 C A 30 51.861 124.819 26.513 1.00 65.42 C
ATOM 21 C6 C A 30 51.583 125.988 25.930 1.00 65.16 C
ATOM 22 P G A 31 54.534 128.767 22.289 1.00 61.57 P
ATOM 23 OP1 G A 31 54.948 129.752 21.254 1.00 61.25 O
ATOM 24 OP2 G A 31 54.658 127.302 22.009 1.00 59.27 O
ATOM 25 O5' G A 31 55.348 129.114 23.615 1.00 61.16 O
TER
ATOM 1 O3' A B 429 53.822 128.215 37.145 1.00 65.03 O
ATOM 2 P A B 430 53.565 129.333 38.255 1.00 65.12 P
ATOM 3 OP1 A B 430 54.456 128.987 39.404 1.00 64.61 O
ATOM 4 OP2 A B 430 52.100 129.450 38.472 1.00 64.76 O
ATOM 5 O5' A B 430 54.079 130.665 37.550 1.00 63.22 O
ATOM 6 C5' A B 430 55.219 131.389 38.050 1.00 62.38 C
ATOM 7 C4' A B 430 55.890 132.122 36.924 1.00 62.10 C
ATOM 8 O4' A B 430 56.578 131.166 36.079 1.00 62.82 O
ATOM 9 C3' A B 430 54.920 132.813 35.985 1.00 63.67 C
ATOM 10 O3' A B 430 54.493 134.075 36.469 1.00 63.97 O
ATOM 11 C2' A B 430 55.716 132.892 34.696 1.00 64.47 C
ATOM 12 O2' A B 430 56.662 133.938 34.737 1.00 65.24 O
ATOM 13 C1' A B 430 56.431 131.537 34.713 1.00 65.06 C
ATOM 14 N9 A B 430 55.695 130.466 34.027 1.00 66.88 N
ATOM 15 C8 A B 430 55.116 129.363 34.610 1.00 67.42 C
ATOM 16 N7 A B 430 54.539 128.550 33.757 1.00 66.94 N
ATOM 17 C5 A B 430 54.743 129.156 32.528 1.00 66.46 C
ATOM 18 C6 A B 430 54.367 128.790 31.229 1.00 66.25 C
ATOM 19 N6 A B 430 53.693 127.676 30.941 1.00 66.01 N
ATOM 20 N1 A B 430 54.712 129.616 30.221 1.00 66.54 N
ATOM 21 C2 A B 430 55.391 130.733 30.513 1.00 66.02 C
ATOM 22 N3 A B 430 55.804 131.186 31.694 1.00 65.88 N
ATOM 23 C4 A B 430 55.446 130.342 32.676 1.00 66.90 C
ATOM 24 P C B 431 52.920 134.398 36.536 1.00 64.84 P
ATOM 25 OP1 C B 431 52.756 135.774 37.054 1.00 64.24 O
ATOM 26 OP2 C B 431 52.249 133.273 37.231 1.00 65.97 O
ATOM 27 O5' C B 431 52.469 134.379 35.007 1.00 66.18 O
TER
ATOM 2 P C A 30 49.731 124.848 22.461 1.00 65.90 P
ATOM 3 OP1 C A 30 49.688 124.993 20.986 1.00 64.67 O
ATOM 4 OP2 C A 30 50.308 123.611 23.053 1.00 63.71 O
ATOM 5 O5' C A 30 50.532 126.095 23.063 1.00 65.45 O
ATOM 6 C5' C A 30 50.186 127.456 22.705 1.00 64.66 C
ATOM 7 C4' C A 30 50.865 128.448 23.636 1.00 63.73 C
ATOM 8 O4' C A 30 50.422 128.229 25.004 1.00 63.60 O
ATOM 9 C3' C A 30 52.381 128.374 23.720 1.00 62.53 C
ATOM 10 O3' C A 30 53.011 129.096 22.674 1.00 60.69 O
ATOM 11 C2' C A 30 52.661 129.010 25.072 1.00 62.73 C
ATOM 12 O2' C A 30 52.599 130.423 25.010 1.00 62.05 O
ATOM 13 C1' C A 30 51.499 128.458 25.903 1.00 63.14 C
ATOM 14 N1 C A 30 51.816 127.175 26.570 1.00 64.01 N
ATOM 15 C2 C A 30 52.360 127.181 27.870 1.00 63.60 C
ATOM 16 O2 C A 30 52.568 128.265 28.441 1.00 62.66 O
ATOM 17 N3 C A 30 52.643 125.999 28.468 1.00 64.04 N
ATOM 18 C4 C A 30 52.408 124.851 27.825 1.00 65.19 C
ATOM 19 N4 C A 30 52.702 123.708 28.447 1.00 65.34 N
ATOM 20 C5 C A 30 51.861 124.819 26.513 1.00 65.42 C
ATOM 21 C6 C A 30 51.583 125.988 25.930 1.00 65.16 C
ATOM 22 P G A 31 54.534 128.767 22.289 1.00 61.57 P
ATOM 23 OP1 G A 31 54.948 129.752 21.254 1.00 61.25 O
ATOM 24 OP2 G A 31 54.658 127.302 22.009 1.00 59.27 O
ATOM 25 O5' G A 31 55.348 129.114 23.615 1.00 61.16 O
TER
ATOM 1 O3' A B 429 53.822 128.215 37.145 1.00 65.03 O
ATOM 2 P A B 430 53.565 129.333 38.255 1.00 65.12 P
ATOM 3 OP1 A B 430 54.456 128.987 39.404 1.00 64.61 O
ATOM 4 OP2 A B 430 52.100 129.450 38.472 1.00 64.76 O
ATOM 5 O5' A B 430 54.079 130.665 37.550 1.00 63.22 O
ATOM 6 C5' A B 430 55.219 131.389 38.050 1.00 62.38 C
ATOM 7 C4' A B 430 55.890 132.122 36.924 1.00 62.10 C
ATOM 8 O4' A B 430 56.578 131.166 36.079 1.00 62.82 O
ATOM 9 C3' A B 430 54.920 132.813 35.985 1.00 63.67 C
ATOM 10 O3' A B 430 54.493 134.075 36.469 1.00 63.97 O
ATOM 11 C2' A B 430 55.716 132.892 34.696 1.00 64.47 C
ATOM 12 O2' A B 430 56.662 133.938 34.737 1.00 65.24 O
ATOM 13 C1' A B 430 56.431 131.537 34.713 1.00 65.06 C
ATOM 14 N9 A B 430 55.695 130.466 34.027 1.00 66.88 N
ATOM 15 C8 A B 430 55.116 129.363 34.610 1.00 67.42 C
ATOM 16 N7 A B 430 54.539 128.550 33.757 1.00 66.94 N
ATOM 17 C5 A B 430 54.743 129.156 32.528 1.00 66.46 C
ATOM 18 C6 A B 430 54.367 128.790 31.229 1.00 66.25 C
ATOM 19 N6 A B 430 53.693 127.676 30.941 1.00 66.01 N
ATOM 20 N1 A B 430 54.712 129.616 30.221 1.00 66.54 N
ATOM 21 C2 A B 430 55.391 130.733 30.513 1.00 66.02 C
ATOM 22 N3 A B 430 55.804 131.186 31.694 1.00 65.88 N
ATOM 23 C4 A B 430 55.446 130.342 32.676 1.00 66.90 C
ATOM 24 P C B 431 52.920 134.398 36.536 1.00 64.84 P
ATOM 25 OP1 C B 431 52.756 135.774 37.054 1.00 64.24 O
ATOM 26 OP2 C B 431 52.249 133.273 37.231 1.00 65.97 O
ATOM 27 O5' C B 431 52.469 134.379 35.007 1.00 66.18 O
TER
Atoms:
C2: (52.360,127.181,27.870)
OP1: (49.688,124.993,20.986)
OP2: (50.308,123.611,23.053)
C4: (52.408,124.851,27.825)
O5': (50.532,126.095,23.063)
C3': (52.381,128.374,23.720)
C1': (51.499,128.458,25.903)
O4': (50.422,128.229,25.004)
C5': (50.186,127.456,22.705)
P: (49.731,124.848,22.461)
O2: (52.568,128.265,28.441)
C4': (50.865,128.448,23.636)
C2': (52.661,129.010,25.072)
O2': (52.599,130.423,25.010)
N1: (51.816,127.175,26.570)
N3: (52.643,125.999,28.468)
N4: (52.702,123.708,28.447)
C6: (51.583,125.988,25.930)
C5: (51.861,124.819,26.513)
O3': (53.011,129.096,22.674)
OP1: (49.688,124.993,20.986)
OP2: (50.308,123.611,23.053)
C4: (52.408,124.851,27.825)
O5': (50.532,126.095,23.063)
C3': (52.381,128.374,23.720)
C1': (51.499,128.458,25.903)
O4': (50.422,128.229,25.004)
C5': (50.186,127.456,22.705)
P: (49.731,124.848,22.461)
O2: (52.568,128.265,28.441)
C4': (50.865,128.448,23.636)
C2': (52.661,129.010,25.072)
O2': (52.599,130.423,25.010)
N1: (51.816,127.175,26.570)
N3: (52.643,125.999,28.468)
N4: (52.702,123.708,28.447)
C6: (51.583,125.988,25.930)
C5: (51.861,124.819,26.513)
O3': (53.011,129.096,22.674)
OP1: (54.456,128.987,39.404)
OP2: (52.100,129.450,38.472)
C3': (54.920,132.813,35.985)
C1': (56.431,131.537,34.713)
C5': (55.219,131.389,38.050)
O4': (56.578,131.166,36.079)
C8: (55.116,129.363,34.610)
O2': (56.662,133.938,34.737)
C6: (54.367,128.790,31.229)
C5: (54.743,129.156,32.528)
C4: (55.446,130.342,32.676)
P: (53.565,129.333,38.255)
C4': (55.890,132.122,36.924)
C2': (55.716,132.892,34.696)
C2: (55.391,130.733,30.513)
N1: (54.712,129.616,30.221)
N3: (55.804,131.186,31.694)
N6: (53.693,127.676,30.941)
N7: (54.539,128.550,33.757)
N9: (55.695,130.466,34.027)
O5': (54.079,130.665,37.550)
O3': (54.493,134.075,36.469)
OP2: (52.100,129.450,38.472)
C3': (54.920,132.813,35.985)
C1': (56.431,131.537,34.713)
C5': (55.219,131.389,38.050)
O4': (56.578,131.166,36.079)
C8: (55.116,129.363,34.610)
O2': (56.662,133.938,34.737)
C6: (54.367,128.790,31.229)
C5: (54.743,129.156,32.528)
C4: (55.446,130.342,32.676)
P: (53.565,129.333,38.255)
C4': (55.890,132.122,36.924)
C2': (55.716,132.892,34.696)
C2: (55.391,130.733,30.513)
N1: (54.712,129.616,30.221)
N3: (55.804,131.186,31.694)
N6: (53.693,127.676,30.941)
N7: (54.539,128.550,33.757)
N9: (55.695,130.466,34.027)
O5': (54.079,130.665,37.550)
O3': (54.493,134.075,36.469)
Image (generated by PyMOL):