Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5P:E62:E19
Extra
PDB:
ATOM 1 O3' A A 61 -12.522 18.550 117.361 1.00 93.98 O
ATOM 2 P C A 62 -13.728 17.618 117.873 1.00 98.48 P
ATOM 3 OP1 C A 62 -14.981 18.326 117.529 1.00 92.37 O
ATOM 4 OP2 C A 62 -13.460 17.243 119.286 1.00 95.60 O
ATOM 5 O5' C A 62 -13.640 16.303 116.976 1.00 88.00 O
ATOM 6 C5' C A 62 -14.230 16.260 115.680 1.00 95.75 C
ATOM 7 C4' C A 62 -14.100 14.876 115.091 1.00 91.17 C
ATOM 8 O4' C A 62 -12.703 14.586 114.831 1.00 92.51 O
ATOM 9 C3' C A 62 -14.559 13.752 115.998 1.00 93.39 C
ATOM 10 O3' C A 62 -15.958 13.554 115.874 1.00 98.93 O
ATOM 11 C2' C A 62 -13.767 12.564 115.473 1.00 94.70 C
ATOM 12 O2' C A 62 -14.341 11.980 114.326 1.00 92.76 O
ATOM 13 C1' C A 62 -12.437 13.225 115.110 1.00 95.03 C
ATOM 14 N1 C A 62 -11.461 13.179 116.206 1.00100.62 N
ATOM 15 C2 C A 62 -10.686 12.031 116.373 1.00100.03 C
ATOM 16 O2 C A 62 -10.849 11.080 115.591 1.00 97.72 O
ATOM 17 N3 C A 62 -9.780 11.986 117.377 1.00101.96 N
ATOM 18 C4 C A 62 -9.637 13.036 118.194 1.00102.47 C
ATOM 19 N4 C A 62 -8.729 12.954 119.170 1.00 97.76 N
ATOM 20 C5 C A 62 -10.419 14.217 118.046 1.00103.40 C
ATOM 21 C6 C A 62 -11.310 14.245 117.048 1.00100.95 C
ATOM 22 P C A 63 -16.807 13.099 117.155 1.00103.07 P
ATOM 23 OP1 C A 63 -18.246 13.091 116.793 1.00113.63 O
ATOM 24 OP2 C A 63 -16.342 13.930 118.296 1.00106.79 O
ATOM 25 O5' C A 63 -16.341 11.595 117.390 1.00 93.44 O
TER
ATOM 1 O3' G B 18 -4.299 3.572 124.706 1.00103.49 O
ATOM 2 P A B 19 -3.200 3.998 123.606 1.00 89.66 P
ATOM 3 OP1 A B 19 -2.318 2.831 123.361 1.00 96.36 O
ATOM 4 OP2 A B 19 -2.607 5.289 124.049 1.00 94.27 O
ATOM 5 O5' A B 19 -4.045 4.238 122.276 1.00 90.90 O
ATOM 6 C5' A B 19 -4.699 3.147 121.633 1.00 91.13 C
ATOM 7 C4' A B 19 -5.734 3.648 120.654 1.00 86.27 C
ATOM 8 O4' A B 19 -6.718 4.455 121.357 1.00 76.47 O
ATOM 9 C3' A B 19 -5.224 4.564 119.554 1.00 81.14 C
ATOM 10 O3' A B 19 -4.696 3.822 118.467 1.00 95.50 O
ATOM 11 C2' A B 19 -6.490 5.303 119.148 1.00 94.70 C
ATOM 12 O2' A B 19 -7.323 4.561 118.275 1.00 79.85 O
ATOM 13 C1' A B 19 -7.159 5.506 120.508 1.00 90.83 C
ATOM 14 N9 A B 19 -6.742 6.779 121.093 1.00 88.46 N
ATOM 15 C8 A B 19 -5.861 7.016 122.122 1.00 87.48 C
ATOM 16 N7 A B 19 -5.681 8.291 122.378 1.00 86.12 N
ATOM 17 C5 A B 19 -6.505 8.934 121.460 1.00 82.15 C
ATOM 18 C6 A B 19 -6.770 10.289 121.211 1.00 77.86 C
ATOM 19 N6 A B 19 -6.213 11.292 121.883 1.00 78.77 N
ATOM 20 N1 A B 19 -7.643 10.585 120.230 1.00 83.14 N
ATOM 21 C2 A B 19 -8.208 9.580 119.548 1.00 84.74 C
ATOM 22 N3 A B 19 -8.041 8.271 119.685 1.00 83.32 N
ATOM 23 C4 A B 19 -7.167 8.012 120.670 1.00 85.06 C
ATOM 24 P G B 20 -3.446 4.402 117.652 1.00 92.22 P
ATOM 25 OP1 G B 20 -3.121 3.482 116.533 1.00 87.90 O
ATOM 26 OP2 G B 20 -2.414 4.710 118.674 1.00 91.06 O
ATOM 27 O5' G B 20 -4.013 5.758 117.039 1.00 88.28 O
TER
ATOM 2 P C A 62 -13.728 17.618 117.873 1.00 98.48 P
ATOM 3 OP1 C A 62 -14.981 18.326 117.529 1.00 92.37 O
ATOM 4 OP2 C A 62 -13.460 17.243 119.286 1.00 95.60 O
ATOM 5 O5' C A 62 -13.640 16.303 116.976 1.00 88.00 O
ATOM 6 C5' C A 62 -14.230 16.260 115.680 1.00 95.75 C
ATOM 7 C4' C A 62 -14.100 14.876 115.091 1.00 91.17 C
ATOM 8 O4' C A 62 -12.703 14.586 114.831 1.00 92.51 O
ATOM 9 C3' C A 62 -14.559 13.752 115.998 1.00 93.39 C
ATOM 10 O3' C A 62 -15.958 13.554 115.874 1.00 98.93 O
ATOM 11 C2' C A 62 -13.767 12.564 115.473 1.00 94.70 C
ATOM 12 O2' C A 62 -14.341 11.980 114.326 1.00 92.76 O
ATOM 13 C1' C A 62 -12.437 13.225 115.110 1.00 95.03 C
ATOM 14 N1 C A 62 -11.461 13.179 116.206 1.00100.62 N
ATOM 15 C2 C A 62 -10.686 12.031 116.373 1.00100.03 C
ATOM 16 O2 C A 62 -10.849 11.080 115.591 1.00 97.72 O
ATOM 17 N3 C A 62 -9.780 11.986 117.377 1.00101.96 N
ATOM 18 C4 C A 62 -9.637 13.036 118.194 1.00102.47 C
ATOM 19 N4 C A 62 -8.729 12.954 119.170 1.00 97.76 N
ATOM 20 C5 C A 62 -10.419 14.217 118.046 1.00103.40 C
ATOM 21 C6 C A 62 -11.310 14.245 117.048 1.00100.95 C
ATOM 22 P C A 63 -16.807 13.099 117.155 1.00103.07 P
ATOM 23 OP1 C A 63 -18.246 13.091 116.793 1.00113.63 O
ATOM 24 OP2 C A 63 -16.342 13.930 118.296 1.00106.79 O
ATOM 25 O5' C A 63 -16.341 11.595 117.390 1.00 93.44 O
TER
ATOM 1 O3' G B 18 -4.299 3.572 124.706 1.00103.49 O
ATOM 2 P A B 19 -3.200 3.998 123.606 1.00 89.66 P
ATOM 3 OP1 A B 19 -2.318 2.831 123.361 1.00 96.36 O
ATOM 4 OP2 A B 19 -2.607 5.289 124.049 1.00 94.27 O
ATOM 5 O5' A B 19 -4.045 4.238 122.276 1.00 90.90 O
ATOM 6 C5' A B 19 -4.699 3.147 121.633 1.00 91.13 C
ATOM 7 C4' A B 19 -5.734 3.648 120.654 1.00 86.27 C
ATOM 8 O4' A B 19 -6.718 4.455 121.357 1.00 76.47 O
ATOM 9 C3' A B 19 -5.224 4.564 119.554 1.00 81.14 C
ATOM 10 O3' A B 19 -4.696 3.822 118.467 1.00 95.50 O
ATOM 11 C2' A B 19 -6.490 5.303 119.148 1.00 94.70 C
ATOM 12 O2' A B 19 -7.323 4.561 118.275 1.00 79.85 O
ATOM 13 C1' A B 19 -7.159 5.506 120.508 1.00 90.83 C
ATOM 14 N9 A B 19 -6.742 6.779 121.093 1.00 88.46 N
ATOM 15 C8 A B 19 -5.861 7.016 122.122 1.00 87.48 C
ATOM 16 N7 A B 19 -5.681 8.291 122.378 1.00 86.12 N
ATOM 17 C5 A B 19 -6.505 8.934 121.460 1.00 82.15 C
ATOM 18 C6 A B 19 -6.770 10.289 121.211 1.00 77.86 C
ATOM 19 N6 A B 19 -6.213 11.292 121.883 1.00 78.77 N
ATOM 20 N1 A B 19 -7.643 10.585 120.230 1.00 83.14 N
ATOM 21 C2 A B 19 -8.208 9.580 119.548 1.00 84.74 C
ATOM 22 N3 A B 19 -8.041 8.271 119.685 1.00 83.32 N
ATOM 23 C4 A B 19 -7.167 8.012 120.670 1.00 85.06 C
ATOM 24 P G B 20 -3.446 4.402 117.652 1.00 92.22 P
ATOM 25 OP1 G B 20 -3.121 3.482 116.533 1.00 87.90 O
ATOM 26 OP2 G B 20 -2.414 4.710 118.674 1.00 91.06 O
ATOM 27 O5' G B 20 -4.013 5.758 117.039 1.00 88.28 O
TER
Atoms:
C2: (-10.686,12.031,116.373)
OP1: (-14.981,18.326,117.529)
OP2: (-13.460,17.243,119.286)
C4: (-9.637,13.036,118.194)
O5': (-13.640,16.303,116.976)
C3': (-14.559,13.752,115.998)
C1': (-12.437,13.225,115.110)
O4': (-12.703,14.586,114.831)
C5': (-14.230,16.260,115.680)
P: (-13.728,17.618,117.873)
O2: (-10.849,11.080,115.591)
C4': (-14.100,14.876,115.091)
C2': (-13.767,12.564,115.473)
O2': (-14.341,11.980,114.326)
N1: (-11.461,13.179,116.206)
N3: (-9.780,11.986,117.377)
N4: (-8.729,12.954,119.170)
C6: (-11.310,14.245,117.048)
C5: (-10.419,14.217,118.046)
O3': (-15.958,13.554,115.874)
OP1: (-14.981,18.326,117.529)
OP2: (-13.460,17.243,119.286)
C4: (-9.637,13.036,118.194)
O5': (-13.640,16.303,116.976)
C3': (-14.559,13.752,115.998)
C1': (-12.437,13.225,115.110)
O4': (-12.703,14.586,114.831)
C5': (-14.230,16.260,115.680)
P: (-13.728,17.618,117.873)
O2: (-10.849,11.080,115.591)
C4': (-14.100,14.876,115.091)
C2': (-13.767,12.564,115.473)
O2': (-14.341,11.980,114.326)
N1: (-11.461,13.179,116.206)
N3: (-9.780,11.986,117.377)
N4: (-8.729,12.954,119.170)
C6: (-11.310,14.245,117.048)
C5: (-10.419,14.217,118.046)
O3': (-15.958,13.554,115.874)
OP1: (-2.318,2.831,123.361)
OP2: (-2.607,5.289,124.049)
C3': (-5.224,4.564,119.554)
C1': (-7.159,5.506,120.508)
C5': (-4.699,3.147,121.633)
O4': (-6.718,4.455,121.357)
C8: (-5.861,7.016,122.122)
O2': (-7.323,4.561,118.275)
C6: (-6.770,10.289,121.211)
C5: (-6.505,8.934,121.460)
C4: (-7.167,8.012,120.670)
P: (-3.200,3.998,123.606)
C4': (-5.734,3.648,120.654)
C2': (-6.490,5.303,119.148)
C2: (-8.208,9.580,119.548)
N1: (-7.643,10.585,120.230)
N3: (-8.041,8.271,119.685)
N6: (-6.213,11.292,121.883)
N7: (-5.681,8.291,122.378)
N9: (-6.742,6.779,121.093)
O5': (-4.045,4.238,122.276)
O3': (-4.696,3.822,118.467)
OP2: (-2.607,5.289,124.049)
C3': (-5.224,4.564,119.554)
C1': (-7.159,5.506,120.508)
C5': (-4.699,3.147,121.633)
O4': (-6.718,4.455,121.357)
C8: (-5.861,7.016,122.122)
O2': (-7.323,4.561,118.275)
C6: (-6.770,10.289,121.211)
C5: (-6.505,8.934,121.460)
C4: (-7.167,8.012,120.670)
P: (-3.200,3.998,123.606)
C4': (-5.734,3.648,120.654)
C2': (-6.490,5.303,119.148)
C2: (-8.208,9.580,119.548)
N1: (-7.643,10.585,120.230)
N3: (-8.041,8.271,119.685)
N6: (-6.213,11.292,121.883)
N7: (-5.681,8.291,122.378)
N9: (-6.742,6.779,121.093)
O5': (-4.045,4.238,122.276)
O3': (-4.696,3.822,118.467)
Image (generated by PyMOL):