Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02050:02326
Extra
PDB:
ATOM 1 O3' A A2049 72.357 119.871 88.426 1.00 54.94 O
ATOM 2 P C A2050 72.642 118.305 88.620 1.00 52.45 P
ATOM 3 OP1 C A2050 74.058 118.049 88.243 1.00 54.11 O
ATOM 4 OP2 C A2050 71.569 117.557 87.928 1.00 53.01 O
ATOM 5 O5' C A2050 72.440 118.094 90.189 1.00 49.89 O
ATOM 6 C5' C A2050 73.364 118.654 91.151 1.00 44.11 C
ATOM 7 C4' C A2050 73.114 118.058 92.516 1.00 42.47 C
ATOM 8 O4' C A2050 71.879 118.581 93.071 1.00 41.66 O
ATOM 9 C3' C A2050 72.930 116.550 92.515 1.00 40.95 C
ATOM 10 O3' C A2050 74.183 115.894 92.569 1.00 41.67 O
ATOM 11 C2' C A2050 72.098 116.306 93.768 1.00 41.02 C
ATOM 12 O2' C A2050 72.866 116.237 94.950 1.00 41.19 O
ATOM 13 C1' C A2050 71.218 117.561 93.807 1.00 40.67 C
ATOM 14 N1 C A2050 69.845 117.393 93.272 1.00 39.58 N
ATOM 15 C2 C A2050 68.878 116.740 94.064 1.00 37.60 C
ATOM 16 O2 C A2050 69.205 116.288 95.167 1.00 37.00 O
ATOM 17 N3 C A2050 67.616 116.623 93.601 1.00 38.10 N
ATOM 18 C4 C A2050 67.295 117.122 92.402 1.00 38.07 C
ATOM 19 N4 C A2050 66.025 117.008 91.996 1.00 36.10 N
ATOM 20 C5 C A2050 68.258 117.767 91.569 1.00 36.36 C
ATOM 21 C6 C A2050 69.505 117.877 92.036 1.00 37.63 C
ATOM 22 P C A2051 74.472 114.639 91.611 1.00 43.50 P
ATOM 23 OP1 C A2051 75.800 114.090 91.997 1.00 46.08 O
ATOM 24 OP2 C A2051 74.244 115.048 90.209 1.00 42.31 O
ATOM 25 O5' C A2051 73.348 113.589 92.028 1.00 42.98 O
TER
ATOM 1 O3' U B2325 64.315 106.770 96.256 1.00 39.20 O
ATOM 2 P A B2326 64.064 106.783 97.841 1.00 40.39 P
ATOM 3 OP1 A B2326 63.858 105.369 98.261 1.00 38.92 O
ATOM 4 OP2 A B2326 63.032 107.795 98.160 1.00 40.49 O
ATOM 5 O5' A B2326 65.453 107.298 98.426 1.00 40.28 O
ATOM 6 C5' A B2326 66.592 106.425 98.490 1.00 40.01 C
ATOM 7 C4' A B2326 67.869 107.207 98.315 1.00 40.84 C
ATOM 8 O4' A B2326 67.965 107.716 96.959 1.00 41.51 O
ATOM 9 C3' A B2326 68.034 108.454 99.162 1.00 41.79 C
ATOM 10 O3' A B2326 68.407 108.173 100.499 1.00 41.97 O
ATOM 11 C2' A B2326 69.130 109.187 98.405 1.00 42.06 C
ATOM 12 O2' A B2326 70.412 108.623 98.615 1.00 43.85 O
ATOM 13 C1' A B2326 68.697 108.934 96.961 1.00 40.38 C
ATOM 14 N9 A B2326 67.833 110.010 96.476 1.00 38.85 N
ATOM 15 C8 A B2326 66.493 109.984 96.177 1.00 38.77 C
ATOM 16 N7 A B2326 66.017 111.139 95.775 1.00 38.14 N
ATOM 17 C5 A B2326 67.120 111.982 95.808 1.00 39.27 C
ATOM 18 C6 A B2326 67.286 113.345 95.498 1.00 38.54 C
ATOM 19 N6 A B2326 66.305 114.137 95.067 1.00 36.80 N
ATOM 20 N1 A B2326 68.519 113.875 95.647 1.00 39.32 N
ATOM 21 C2 A B2326 69.510 113.088 96.072 1.00 37.95 C
ATOM 22 N3 A B2326 69.483 111.799 96.389 1.00 39.69 N
ATOM 23 C4 A B2326 68.244 111.298 96.236 1.00 40.14 C
ATOM 24 P A B2327 68.063 109.235 101.656 1.00 45.41 P
ATOM 25 OP1 A B2327 68.641 108.676 102.915 1.00 46.08 O
ATOM 26 OP2 A B2327 66.615 109.551 101.592 1.00 42.54 O
ATOM 27 O5' A B2327 68.878 110.548 101.244 1.00 43.98 O
TER
ATOM 2 P C A2050 72.642 118.305 88.620 1.00 52.45 P
ATOM 3 OP1 C A2050 74.058 118.049 88.243 1.00 54.11 O
ATOM 4 OP2 C A2050 71.569 117.557 87.928 1.00 53.01 O
ATOM 5 O5' C A2050 72.440 118.094 90.189 1.00 49.89 O
ATOM 6 C5' C A2050 73.364 118.654 91.151 1.00 44.11 C
ATOM 7 C4' C A2050 73.114 118.058 92.516 1.00 42.47 C
ATOM 8 O4' C A2050 71.879 118.581 93.071 1.00 41.66 O
ATOM 9 C3' C A2050 72.930 116.550 92.515 1.00 40.95 C
ATOM 10 O3' C A2050 74.183 115.894 92.569 1.00 41.67 O
ATOM 11 C2' C A2050 72.098 116.306 93.768 1.00 41.02 C
ATOM 12 O2' C A2050 72.866 116.237 94.950 1.00 41.19 O
ATOM 13 C1' C A2050 71.218 117.561 93.807 1.00 40.67 C
ATOM 14 N1 C A2050 69.845 117.393 93.272 1.00 39.58 N
ATOM 15 C2 C A2050 68.878 116.740 94.064 1.00 37.60 C
ATOM 16 O2 C A2050 69.205 116.288 95.167 1.00 37.00 O
ATOM 17 N3 C A2050 67.616 116.623 93.601 1.00 38.10 N
ATOM 18 C4 C A2050 67.295 117.122 92.402 1.00 38.07 C
ATOM 19 N4 C A2050 66.025 117.008 91.996 1.00 36.10 N
ATOM 20 C5 C A2050 68.258 117.767 91.569 1.00 36.36 C
ATOM 21 C6 C A2050 69.505 117.877 92.036 1.00 37.63 C
ATOM 22 P C A2051 74.472 114.639 91.611 1.00 43.50 P
ATOM 23 OP1 C A2051 75.800 114.090 91.997 1.00 46.08 O
ATOM 24 OP2 C A2051 74.244 115.048 90.209 1.00 42.31 O
ATOM 25 O5' C A2051 73.348 113.589 92.028 1.00 42.98 O
TER
ATOM 1 O3' U B2325 64.315 106.770 96.256 1.00 39.20 O
ATOM 2 P A B2326 64.064 106.783 97.841 1.00 40.39 P
ATOM 3 OP1 A B2326 63.858 105.369 98.261 1.00 38.92 O
ATOM 4 OP2 A B2326 63.032 107.795 98.160 1.00 40.49 O
ATOM 5 O5' A B2326 65.453 107.298 98.426 1.00 40.28 O
ATOM 6 C5' A B2326 66.592 106.425 98.490 1.00 40.01 C
ATOM 7 C4' A B2326 67.869 107.207 98.315 1.00 40.84 C
ATOM 8 O4' A B2326 67.965 107.716 96.959 1.00 41.51 O
ATOM 9 C3' A B2326 68.034 108.454 99.162 1.00 41.79 C
ATOM 10 O3' A B2326 68.407 108.173 100.499 1.00 41.97 O
ATOM 11 C2' A B2326 69.130 109.187 98.405 1.00 42.06 C
ATOM 12 O2' A B2326 70.412 108.623 98.615 1.00 43.85 O
ATOM 13 C1' A B2326 68.697 108.934 96.961 1.00 40.38 C
ATOM 14 N9 A B2326 67.833 110.010 96.476 1.00 38.85 N
ATOM 15 C8 A B2326 66.493 109.984 96.177 1.00 38.77 C
ATOM 16 N7 A B2326 66.017 111.139 95.775 1.00 38.14 N
ATOM 17 C5 A B2326 67.120 111.982 95.808 1.00 39.27 C
ATOM 18 C6 A B2326 67.286 113.345 95.498 1.00 38.54 C
ATOM 19 N6 A B2326 66.305 114.137 95.067 1.00 36.80 N
ATOM 20 N1 A B2326 68.519 113.875 95.647 1.00 39.32 N
ATOM 21 C2 A B2326 69.510 113.088 96.072 1.00 37.95 C
ATOM 22 N3 A B2326 69.483 111.799 96.389 1.00 39.69 N
ATOM 23 C4 A B2326 68.244 111.298 96.236 1.00 40.14 C
ATOM 24 P A B2327 68.063 109.235 101.656 1.00 45.41 P
ATOM 25 OP1 A B2327 68.641 108.676 102.915 1.00 46.08 O
ATOM 26 OP2 A B2327 66.615 109.551 101.592 1.00 42.54 O
ATOM 27 O5' A B2327 68.878 110.548 101.244 1.00 43.98 O
TER
Atoms:
C2: (68.878,116.740,94.064)
OP1: (74.058,118.049,88.243)
OP2: (71.569,117.557,87.928)
C4: (67.295,117.122,92.402)
O5': (72.440,118.094,90.189)
C3': (72.930,116.550,92.515)
C1': (71.218,117.561,93.807)
O4': (71.879,118.581,93.071)
C5': (73.364,118.654,91.151)
P: (72.642,118.305,88.620)
O2: (69.205,116.288,95.167)
C4': (73.114,118.058,92.516)
C2': (72.098,116.306,93.768)
O2': (72.866,116.237,94.950)
N1: (69.845,117.393,93.272)
N3: (67.616,116.623,93.601)
N4: (66.025,117.008,91.996)
C6: (69.505,117.877,92.036)
C5: (68.258,117.767,91.569)
O3': (74.183,115.894,92.569)
OP1: (74.058,118.049,88.243)
OP2: (71.569,117.557,87.928)
C4: (67.295,117.122,92.402)
O5': (72.440,118.094,90.189)
C3': (72.930,116.550,92.515)
C1': (71.218,117.561,93.807)
O4': (71.879,118.581,93.071)
C5': (73.364,118.654,91.151)
P: (72.642,118.305,88.620)
O2: (69.205,116.288,95.167)
C4': (73.114,118.058,92.516)
C2': (72.098,116.306,93.768)
O2': (72.866,116.237,94.950)
N1: (69.845,117.393,93.272)
N3: (67.616,116.623,93.601)
N4: (66.025,117.008,91.996)
C6: (69.505,117.877,92.036)
C5: (68.258,117.767,91.569)
O3': (74.183,115.894,92.569)
OP1: (63.858,105.369,98.261)
OP2: (63.032,107.795,98.160)
C3': (68.034,108.454,99.162)
C1': (68.697,108.934,96.961)
C5': (66.592,106.425,98.490)
O4': (67.965,107.716,96.959)
C8: (66.493,109.984,96.177)
O2': (70.412,108.623,98.615)
C6: (67.286,113.345,95.498)
C5: (67.120,111.982,95.808)
C4: (68.244,111.298,96.236)
P: (64.064,106.783,97.841)
C4': (67.869,107.207,98.315)
C2': (69.130,109.187,98.405)
C2: (69.510,113.088,96.072)
N1: (68.519,113.875,95.647)
N3: (69.483,111.799,96.389)
N6: (66.305,114.137,95.067)
N7: (66.017,111.139,95.775)
N9: (67.833,110.010,96.476)
O5': (65.453,107.298,98.426)
O3': (68.407,108.173,100.499)
OP2: (63.032,107.795,98.160)
C3': (68.034,108.454,99.162)
C1': (68.697,108.934,96.961)
C5': (66.592,106.425,98.490)
O4': (67.965,107.716,96.959)
C8: (66.493,109.984,96.177)
O2': (70.412,108.623,98.615)
C6: (67.286,113.345,95.498)
C5: (67.120,111.982,95.808)
C4: (68.244,111.298,96.236)
P: (64.064,106.783,97.841)
C4': (67.869,107.207,98.315)
C2': (69.130,109.187,98.405)
C2: (69.510,113.088,96.072)
N1: (68.519,113.875,95.647)
N3: (69.483,111.799,96.389)
N6: (66.305,114.137,95.067)
N7: (66.017,111.139,95.775)
N9: (67.833,110.010,96.476)
O5': (65.453,107.298,98.426)
O3': (68.407,108.173,100.499)
Image (generated by PyMOL):