Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0478:0490
Extra
PDB:
ATOM 1 O3' A A 477 22.694 174.679 57.370 1.00 71.38 O
ATOM 2 P C A 478 23.041 175.648 58.599 1.00 71.31 P
ATOM 3 OP1 C A 478 23.557 176.908 58.015 1.00 71.33 O
ATOM 4 OP2 C A 478 23.879 174.893 59.562 1.00 73.05 O
ATOM 5 O5' C A 478 21.630 175.931 59.284 1.00 71.14 O
ATOM 6 C5' C A 478 20.643 176.760 58.641 1.00 69.55 C
ATOM 7 C4' C A 478 19.437 176.931 59.535 1.00 68.82 C
ATOM 8 O4' C A 478 18.678 175.696 59.603 1.00 67.11 O
ATOM 9 C3' C A 478 19.747 177.263 60.983 1.00 68.91 C
ATOM 10 O3' C A 478 20.037 178.644 61.160 1.00 69.16 O
ATOM 11 C2' C A 478 18.481 176.804 61.698 1.00 69.47 C
ATOM 12 O2' C A 478 17.395 177.705 61.621 1.00 69.88 O
ATOM 13 C1' C A 478 18.144 175.540 60.909 1.00 68.52 C
ATOM 14 N1 C A 478 18.756 174.350 61.516 1.00 70.69 N
ATOM 15 C2 C A 478 18.092 173.704 62.563 1.00 72.03 C
ATOM 16 O2 C A 478 17.012 174.163 62.972 1.00 72.94 O
ATOM 17 N3 C A 478 18.644 172.602 63.109 1.00 73.03 N
ATOM 18 C4 C A 478 19.813 172.144 62.655 1.00 73.29 C
ATOM 19 N4 C A 478 20.314 171.039 63.216 1.00 74.79 N
ATOM 20 C5 C A 478 20.517 172.792 61.603 1.00 72.83 C
ATOM 21 C6 C A 478 19.958 173.878 61.067 1.00 71.98 C
ATOM 22 P C A 479 20.983 179.109 62.372 1.00 69.05 P
ATOM 23 OP1 C A 479 21.159 180.574 62.279 1.00 71.16 O
ATOM 24 OP2 C A 479 22.178 178.233 62.391 1.00 70.61 O
ATOM 25 O5' C A 479 20.103 178.824 63.666 1.00 68.30 O
TER
ATOM 1 O3' G B 489 17.372 166.642 73.905 1.00 57.49 O
ATOM 2 P A B 490 16.496 165.861 72.808 1.00 57.92 P
ATOM 3 OP1 A B 490 15.345 165.255 73.530 1.00 57.88 O
ATOM 4 OP2 A B 490 17.395 165.001 71.994 1.00 58.47 O
ATOM 5 O5' A B 490 15.947 167.015 71.858 1.00 61.52 O
ATOM 6 C5' A B 490 14.962 167.958 72.328 1.00 65.33 C
ATOM 7 C4' A B 490 14.755 169.060 71.313 1.00 67.21 C
ATOM 8 O4' A B 490 16.008 169.771 71.106 1.00 65.89 O
ATOM 9 C3' A B 490 14.356 168.626 69.910 1.00 68.89 C
ATOM 10 O3' A B 490 12.969 168.312 69.787 1.00 70.92 O
ATOM 11 C2' A B 490 14.756 169.848 69.097 1.00 68.97 C
ATOM 12 O2' A B 490 13.846 170.925 69.233 1.00 70.55 O
ATOM 13 C1' A B 490 16.084 170.216 69.760 1.00 67.55 C
ATOM 14 N9 A B 490 17.188 169.523 69.099 1.00 67.43 N
ATOM 15 C8 A B 490 17.808 168.356 69.464 1.00 68.14 C
ATOM 16 N7 A B 490 18.729 167.958 68.621 1.00 67.75 N
ATOM 17 C5 A B 490 18.722 168.935 67.640 1.00 67.31 C
ATOM 18 C6 A B 490 19.460 169.088 66.458 1.00 68.48 C
ATOM 19 N6 A B 490 20.378 168.217 66.035 1.00 67.98 N
ATOM 20 N1 A B 490 19.216 170.179 65.705 1.00 69.86 N
ATOM 21 C2 A B 490 18.283 171.048 66.119 1.00 70.50 C
ATOM 22 N3 A B 490 17.518 171.009 67.206 1.00 69.51 N
ATOM 23 C4 A B 490 17.791 169.913 67.931 1.00 67.88 C
ATOM 24 P G B 491 12.504 167.105 68.819 1.00 74.03 P
ATOM 25 OP1 G B 491 11.013 167.123 68.798 1.00 73.40 O
ATOM 26 OP2 G B 491 13.216 165.862 69.218 1.00 73.09 O
ATOM 27 O5' G B 491 13.026 167.520 67.370 1.00 72.36 O
TER
ATOM 2 P C A 478 23.041 175.648 58.599 1.00 71.31 P
ATOM 3 OP1 C A 478 23.557 176.908 58.015 1.00 71.33 O
ATOM 4 OP2 C A 478 23.879 174.893 59.562 1.00 73.05 O
ATOM 5 O5' C A 478 21.630 175.931 59.284 1.00 71.14 O
ATOM 6 C5' C A 478 20.643 176.760 58.641 1.00 69.55 C
ATOM 7 C4' C A 478 19.437 176.931 59.535 1.00 68.82 C
ATOM 8 O4' C A 478 18.678 175.696 59.603 1.00 67.11 O
ATOM 9 C3' C A 478 19.747 177.263 60.983 1.00 68.91 C
ATOM 10 O3' C A 478 20.037 178.644 61.160 1.00 69.16 O
ATOM 11 C2' C A 478 18.481 176.804 61.698 1.00 69.47 C
ATOM 12 O2' C A 478 17.395 177.705 61.621 1.00 69.88 O
ATOM 13 C1' C A 478 18.144 175.540 60.909 1.00 68.52 C
ATOM 14 N1 C A 478 18.756 174.350 61.516 1.00 70.69 N
ATOM 15 C2 C A 478 18.092 173.704 62.563 1.00 72.03 C
ATOM 16 O2 C A 478 17.012 174.163 62.972 1.00 72.94 O
ATOM 17 N3 C A 478 18.644 172.602 63.109 1.00 73.03 N
ATOM 18 C4 C A 478 19.813 172.144 62.655 1.00 73.29 C
ATOM 19 N4 C A 478 20.314 171.039 63.216 1.00 74.79 N
ATOM 20 C5 C A 478 20.517 172.792 61.603 1.00 72.83 C
ATOM 21 C6 C A 478 19.958 173.878 61.067 1.00 71.98 C
ATOM 22 P C A 479 20.983 179.109 62.372 1.00 69.05 P
ATOM 23 OP1 C A 479 21.159 180.574 62.279 1.00 71.16 O
ATOM 24 OP2 C A 479 22.178 178.233 62.391 1.00 70.61 O
ATOM 25 O5' C A 479 20.103 178.824 63.666 1.00 68.30 O
TER
ATOM 1 O3' G B 489 17.372 166.642 73.905 1.00 57.49 O
ATOM 2 P A B 490 16.496 165.861 72.808 1.00 57.92 P
ATOM 3 OP1 A B 490 15.345 165.255 73.530 1.00 57.88 O
ATOM 4 OP2 A B 490 17.395 165.001 71.994 1.00 58.47 O
ATOM 5 O5' A B 490 15.947 167.015 71.858 1.00 61.52 O
ATOM 6 C5' A B 490 14.962 167.958 72.328 1.00 65.33 C
ATOM 7 C4' A B 490 14.755 169.060 71.313 1.00 67.21 C
ATOM 8 O4' A B 490 16.008 169.771 71.106 1.00 65.89 O
ATOM 9 C3' A B 490 14.356 168.626 69.910 1.00 68.89 C
ATOM 10 O3' A B 490 12.969 168.312 69.787 1.00 70.92 O
ATOM 11 C2' A B 490 14.756 169.848 69.097 1.00 68.97 C
ATOM 12 O2' A B 490 13.846 170.925 69.233 1.00 70.55 O
ATOM 13 C1' A B 490 16.084 170.216 69.760 1.00 67.55 C
ATOM 14 N9 A B 490 17.188 169.523 69.099 1.00 67.43 N
ATOM 15 C8 A B 490 17.808 168.356 69.464 1.00 68.14 C
ATOM 16 N7 A B 490 18.729 167.958 68.621 1.00 67.75 N
ATOM 17 C5 A B 490 18.722 168.935 67.640 1.00 67.31 C
ATOM 18 C6 A B 490 19.460 169.088 66.458 1.00 68.48 C
ATOM 19 N6 A B 490 20.378 168.217 66.035 1.00 67.98 N
ATOM 20 N1 A B 490 19.216 170.179 65.705 1.00 69.86 N
ATOM 21 C2 A B 490 18.283 171.048 66.119 1.00 70.50 C
ATOM 22 N3 A B 490 17.518 171.009 67.206 1.00 69.51 N
ATOM 23 C4 A B 490 17.791 169.913 67.931 1.00 67.88 C
ATOM 24 P G B 491 12.504 167.105 68.819 1.00 74.03 P
ATOM 25 OP1 G B 491 11.013 167.123 68.798 1.00 73.40 O
ATOM 26 OP2 G B 491 13.216 165.862 69.218 1.00 73.09 O
ATOM 27 O5' G B 491 13.026 167.520 67.370 1.00 72.36 O
TER
Atoms:
C2: (18.092,173.704,62.563)
OP1: (23.557,176.908,58.015)
OP2: (23.879,174.893,59.562)
C4: (19.813,172.144,62.655)
O5': (21.630,175.931,59.284)
C3': (19.747,177.263,60.983)
C1': (18.144,175.540,60.909)
O4': (18.678,175.696,59.603)
C5': (20.643,176.760,58.641)
P: (23.041,175.648,58.599)
O2: (17.012,174.163,62.972)
C4': (19.437,176.931,59.535)
C2': (18.481,176.804,61.698)
O2': (17.395,177.705,61.621)
N1: (18.756,174.350,61.516)
N3: (18.644,172.602,63.109)
N4: (20.314,171.039,63.216)
C6: (19.958,173.878,61.067)
C5: (20.517,172.792,61.603)
O3': (20.037,178.644,61.160)
OP1: (23.557,176.908,58.015)
OP2: (23.879,174.893,59.562)
C4: (19.813,172.144,62.655)
O5': (21.630,175.931,59.284)
C3': (19.747,177.263,60.983)
C1': (18.144,175.540,60.909)
O4': (18.678,175.696,59.603)
C5': (20.643,176.760,58.641)
P: (23.041,175.648,58.599)
O2: (17.012,174.163,62.972)
C4': (19.437,176.931,59.535)
C2': (18.481,176.804,61.698)
O2': (17.395,177.705,61.621)
N1: (18.756,174.350,61.516)
N3: (18.644,172.602,63.109)
N4: (20.314,171.039,63.216)
C6: (19.958,173.878,61.067)
C5: (20.517,172.792,61.603)
O3': (20.037,178.644,61.160)
OP1: (15.345,165.255,73.530)
OP2: (17.395,165.001,71.994)
C3': (14.356,168.626,69.910)
C1': (16.084,170.216,69.760)
C5': (14.962,167.958,72.328)
O4': (16.008,169.771,71.106)
C8: (17.808,168.356,69.464)
O2': (13.846,170.925,69.233)
C6: (19.460,169.088,66.458)
C5: (18.722,168.935,67.640)
C4: (17.791,169.913,67.931)
P: (16.496,165.861,72.808)
C4': (14.755,169.060,71.313)
C2': (14.756,169.848,69.097)
C2: (18.283,171.048,66.119)
N1: (19.216,170.179,65.705)
N3: (17.518,171.009,67.206)
N6: (20.378,168.217,66.035)
N7: (18.729,167.958,68.621)
N9: (17.188,169.523,69.099)
O5': (15.947,167.015,71.858)
O3': (12.969,168.312,69.787)
OP2: (17.395,165.001,71.994)
C3': (14.356,168.626,69.910)
C1': (16.084,170.216,69.760)
C5': (14.962,167.958,72.328)
O4': (16.008,169.771,71.106)
C8: (17.808,168.356,69.464)
O2': (13.846,170.925,69.233)
C6: (19.460,169.088,66.458)
C5: (18.722,168.935,67.640)
C4: (17.791,169.913,67.931)
P: (16.496,165.861,72.808)
C4': (14.755,169.060,71.313)
C2': (14.756,169.848,69.097)
C2: (18.283,171.048,66.119)
N1: (19.216,170.179,65.705)
N3: (17.518,171.009,67.206)
N6: (20.378,168.217,66.035)
N7: (18.729,167.958,68.621)
N9: (17.188,169.523,69.099)
O5': (15.947,167.015,71.858)
O3': (12.969,168.312,69.787)
Image (generated by PyMOL):