Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1554:A1226
Extra
PDB:
ATOM 1 O3' A A1553 44.866 -62.809 -20.064 1.00 49.33 O
ATOM 2 P C A1554 43.814 -63.365 -18.982 1.00 43.37 P
ATOM 3 OP1 C A1554 42.441 -63.359 -19.598 1.00 44.09 O
ATOM 4 OP2 C A1554 44.032 -62.676 -17.690 1.00 41.11 O
ATOM 5 O5' C A1554 44.377 -64.829 -18.734 1.00 34.86 O
ATOM 6 C5' C A1554 43.529 -65.891 -18.414 1.00 42.10 C
ATOM 7 C4' C A1554 43.584 -66.175 -16.938 1.00 38.65 C
ATOM 8 O4' C A1554 44.818 -65.808 -16.294 1.00 38.86 O
ATOM 9 C3' C A1554 42.458 -65.595 -16.089 1.00 42.21 C
ATOM 10 O3' C A1554 41.825 -66.707 -15.502 1.00 44.78 O
ATOM 11 C2' C A1554 43.198 -64.752 -15.047 1.00 41.32 C
ATOM 12 O2' C A1554 42.558 -64.747 -13.785 1.00 47.40 O
ATOM 13 C1' C A1554 44.523 -65.492 -14.959 1.00 41.92 C
ATOM 14 N1 C A1554 45.616 -64.725 -14.346 1.00 39.03 N
ATOM 15 C2 C A1554 45.829 -64.875 -12.966 1.00 37.88 C
ATOM 16 O2 C A1554 45.142 -65.684 -12.330 1.00 39.39 O
ATOM 17 N3 C A1554 46.771 -64.139 -12.363 1.00 39.60 N
ATOM 18 C4 C A1554 47.499 -63.283 -13.068 1.00 40.73 C
ATOM 19 N4 C A1554 48.382 -62.544 -12.409 1.00 43.43 N
ATOM 20 C5 C A1554 47.341 -63.135 -14.481 1.00 40.40 C
ATOM 21 C6 C A1554 46.394 -63.872 -15.074 1.00 40.48 C
ATOM 22 P A A1555 40.383 -67.161 -16.020 1.00 44.67 P
ATOM 23 OP1 A A1555 40.380 -68.658 -16.000 1.00 30.01 O
ATOM 24 OP2 A A1555 40.065 -66.434 -17.289 1.00 37.66 O
ATOM 25 O5' A A1555 39.418 -66.548 -14.908 1.00 35.73 O
TER
ATOM 1 O3' C B1225 43.581 -69.944 -2.459 1.00 33.38 O
ATOM 2 P G B1226 43.226 -68.883 -1.308 1.00 44.30 P
ATOM 3 OP1 G B1226 43.454 -69.536 0.012 1.00 46.60 O
ATOM 4 OP2 G B1226 41.933 -68.188 -1.598 1.00 44.77 O
ATOM 5 O5' G B1226 44.326 -67.779 -1.525 1.00 40.46 O
ATOM 6 C5' G B1226 44.175 -66.513 -0.966 1.00 35.08 C
ATOM 7 C4' G B1226 44.417 -65.474 -2.019 1.00 41.18 C
ATOM 8 O4' G B1226 45.069 -66.029 -3.200 1.00 40.16 O
ATOM 9 C3' G B1226 43.177 -64.899 -2.651 1.00 48.07 C
ATOM 10 O3' G B1226 42.475 -64.044 -1.783 1.00 57.19 O
ATOM 11 C2' G B1226 43.748 -64.184 -3.872 1.00 43.25 C
ATOM 12 O2' G B1226 44.236 -62.878 -3.612 1.00 45.41 O
ATOM 13 C1' G B1226 44.882 -65.127 -4.289 1.00 41.72 C
ATOM 14 N9 G B1226 44.447 -65.836 -5.493 1.00 39.45 N
ATOM 15 C8 G B1226 43.567 -66.887 -5.552 1.00 45.53 C
ATOM 16 N7 G B1226 43.219 -67.191 -6.772 1.00 51.66 N
ATOM 17 C5 G B1226 43.943 -66.315 -7.577 1.00 42.36 C
ATOM 18 C6 G B1226 43.960 -66.149 -9.011 1.00 42.66 C
ATOM 19 O6 G B1226 43.263 -66.726 -9.880 1.00 52.11 O
ATOM 20 N1 G B1226 44.877 -65.180 -9.402 1.00 35.18 N
ATOM 21 C2 G B1226 45.644 -64.438 -8.551 1.00 39.09 C
ATOM 22 N2 G B1226 46.477 -63.569 -9.141 1.00 40.15 N
ATOM 23 N3 G B1226 45.605 -64.543 -7.224 1.00 37.98 N
ATOM 24 C4 G B1226 44.743 -65.502 -6.809 1.00 37.21 C
ATOM 25 P A B1227 40.900 -64.227 -1.649 1.00 51.35 P
ATOM 26 OP1 A B1227 40.673 -65.364 -0.703 1.00 36.83 O
ATOM 27 OP2 A B1227 40.440 -64.338 -3.066 1.00 44.76 O
ATOM 28 O5' A B1227 40.453 -62.804 -1.059 1.00 51.38 O
TER
ATOM 2 P C A1554 43.814 -63.365 -18.982 1.00 43.37 P
ATOM 3 OP1 C A1554 42.441 -63.359 -19.598 1.00 44.09 O
ATOM 4 OP2 C A1554 44.032 -62.676 -17.690 1.00 41.11 O
ATOM 5 O5' C A1554 44.377 -64.829 -18.734 1.00 34.86 O
ATOM 6 C5' C A1554 43.529 -65.891 -18.414 1.00 42.10 C
ATOM 7 C4' C A1554 43.584 -66.175 -16.938 1.00 38.65 C
ATOM 8 O4' C A1554 44.818 -65.808 -16.294 1.00 38.86 O
ATOM 9 C3' C A1554 42.458 -65.595 -16.089 1.00 42.21 C
ATOM 10 O3' C A1554 41.825 -66.707 -15.502 1.00 44.78 O
ATOM 11 C2' C A1554 43.198 -64.752 -15.047 1.00 41.32 C
ATOM 12 O2' C A1554 42.558 -64.747 -13.785 1.00 47.40 O
ATOM 13 C1' C A1554 44.523 -65.492 -14.959 1.00 41.92 C
ATOM 14 N1 C A1554 45.616 -64.725 -14.346 1.00 39.03 N
ATOM 15 C2 C A1554 45.829 -64.875 -12.966 1.00 37.88 C
ATOM 16 O2 C A1554 45.142 -65.684 -12.330 1.00 39.39 O
ATOM 17 N3 C A1554 46.771 -64.139 -12.363 1.00 39.60 N
ATOM 18 C4 C A1554 47.499 -63.283 -13.068 1.00 40.73 C
ATOM 19 N4 C A1554 48.382 -62.544 -12.409 1.00 43.43 N
ATOM 20 C5 C A1554 47.341 -63.135 -14.481 1.00 40.40 C
ATOM 21 C6 C A1554 46.394 -63.872 -15.074 1.00 40.48 C
ATOM 22 P A A1555 40.383 -67.161 -16.020 1.00 44.67 P
ATOM 23 OP1 A A1555 40.380 -68.658 -16.000 1.00 30.01 O
ATOM 24 OP2 A A1555 40.065 -66.434 -17.289 1.00 37.66 O
ATOM 25 O5' A A1555 39.418 -66.548 -14.908 1.00 35.73 O
TER
ATOM 1 O3' C B1225 43.581 -69.944 -2.459 1.00 33.38 O
ATOM 2 P G B1226 43.226 -68.883 -1.308 1.00 44.30 P
ATOM 3 OP1 G B1226 43.454 -69.536 0.012 1.00 46.60 O
ATOM 4 OP2 G B1226 41.933 -68.188 -1.598 1.00 44.77 O
ATOM 5 O5' G B1226 44.326 -67.779 -1.525 1.00 40.46 O
ATOM 6 C5' G B1226 44.175 -66.513 -0.966 1.00 35.08 C
ATOM 7 C4' G B1226 44.417 -65.474 -2.019 1.00 41.18 C
ATOM 8 O4' G B1226 45.069 -66.029 -3.200 1.00 40.16 O
ATOM 9 C3' G B1226 43.177 -64.899 -2.651 1.00 48.07 C
ATOM 10 O3' G B1226 42.475 -64.044 -1.783 1.00 57.19 O
ATOM 11 C2' G B1226 43.748 -64.184 -3.872 1.00 43.25 C
ATOM 12 O2' G B1226 44.236 -62.878 -3.612 1.00 45.41 O
ATOM 13 C1' G B1226 44.882 -65.127 -4.289 1.00 41.72 C
ATOM 14 N9 G B1226 44.447 -65.836 -5.493 1.00 39.45 N
ATOM 15 C8 G B1226 43.567 -66.887 -5.552 1.00 45.53 C
ATOM 16 N7 G B1226 43.219 -67.191 -6.772 1.00 51.66 N
ATOM 17 C5 G B1226 43.943 -66.315 -7.577 1.00 42.36 C
ATOM 18 C6 G B1226 43.960 -66.149 -9.011 1.00 42.66 C
ATOM 19 O6 G B1226 43.263 -66.726 -9.880 1.00 52.11 O
ATOM 20 N1 G B1226 44.877 -65.180 -9.402 1.00 35.18 N
ATOM 21 C2 G B1226 45.644 -64.438 -8.551 1.00 39.09 C
ATOM 22 N2 G B1226 46.477 -63.569 -9.141 1.00 40.15 N
ATOM 23 N3 G B1226 45.605 -64.543 -7.224 1.00 37.98 N
ATOM 24 C4 G B1226 44.743 -65.502 -6.809 1.00 37.21 C
ATOM 25 P A B1227 40.900 -64.227 -1.649 1.00 51.35 P
ATOM 26 OP1 A B1227 40.673 -65.364 -0.703 1.00 36.83 O
ATOM 27 OP2 A B1227 40.440 -64.338 -3.066 1.00 44.76 O
ATOM 28 O5' A B1227 40.453 -62.804 -1.059 1.00 51.38 O
TER
Atoms:
C2: (45.829,-64.875,-12.966)
OP1: (42.441,-63.359,-19.598)
OP2: (44.032,-62.676,-17.690)
C4: (47.499,-63.283,-13.068)
O5': (44.377,-64.829,-18.734)
C3': (42.458,-65.595,-16.089)
C1': (44.523,-65.492,-14.959)
O4': (44.818,-65.808,-16.294)
C5': (43.529,-65.891,-18.414)
P: (43.814,-63.365,-18.982)
O2: (45.142,-65.684,-12.330)
C4': (43.584,-66.175,-16.938)
C2': (43.198,-64.752,-15.047)
O2': (42.558,-64.747,-13.785)
N1: (45.616,-64.725,-14.346)
N3: (46.771,-64.139,-12.363)
N4: (48.382,-62.544,-12.409)
C6: (46.394,-63.872,-15.074)
C5: (47.341,-63.135,-14.481)
O3': (41.825,-66.707,-15.502)
OP1: (42.441,-63.359,-19.598)
OP2: (44.032,-62.676,-17.690)
C4: (47.499,-63.283,-13.068)
O5': (44.377,-64.829,-18.734)
C3': (42.458,-65.595,-16.089)
C1': (44.523,-65.492,-14.959)
O4': (44.818,-65.808,-16.294)
C5': (43.529,-65.891,-18.414)
P: (43.814,-63.365,-18.982)
O2: (45.142,-65.684,-12.330)
C4': (43.584,-66.175,-16.938)
C2': (43.198,-64.752,-15.047)
O2': (42.558,-64.747,-13.785)
N1: (45.616,-64.725,-14.346)
N3: (46.771,-64.139,-12.363)
N4: (48.382,-62.544,-12.409)
C6: (46.394,-63.872,-15.074)
C5: (47.341,-63.135,-14.481)
O3': (41.825,-66.707,-15.502)
OP1: (43.454,-69.536,0.012)
OP2: (41.933,-68.188,-1.598)
C3': (43.177,-64.899,-2.651)
C1': (44.882,-65.127,-4.289)
C5': (44.175,-66.513,-0.966)
O6: (43.263,-66.726,-9.880)
O4': (45.069,-66.029,-3.200)
C8: (43.567,-66.887,-5.552)
C2: (45.644,-64.438,-8.551)
C6: (43.960,-66.149,-9.011)
C5: (43.943,-66.315,-7.577)
C4: (44.743,-65.502,-6.809)
P: (43.226,-68.883,-1.308)
C4': (44.417,-65.474,-2.019)
C2': (43.748,-64.184,-3.872)
O2': (44.236,-62.878,-3.612)
N1: (44.877,-65.180,-9.402)
N2: (46.477,-63.569,-9.141)
N3: (45.605,-64.543,-7.224)
N7: (43.219,-67.191,-6.772)
N9: (44.447,-65.836,-5.493)
O5': (44.326,-67.779,-1.525)
O3': (42.475,-64.044,-1.783)
OP2: (41.933,-68.188,-1.598)
C3': (43.177,-64.899,-2.651)
C1': (44.882,-65.127,-4.289)
C5': (44.175,-66.513,-0.966)
O6: (43.263,-66.726,-9.880)
O4': (45.069,-66.029,-3.200)
C8: (43.567,-66.887,-5.552)
C2: (45.644,-64.438,-8.551)
C6: (43.960,-66.149,-9.011)
C5: (43.943,-66.315,-7.577)
C4: (44.743,-65.502,-6.809)
P: (43.226,-68.883,-1.308)
C4': (44.417,-65.474,-2.019)
C2': (43.748,-64.184,-3.872)
O2': (44.236,-62.878,-3.612)
N1: (44.877,-65.180,-9.402)
N2: (46.477,-63.569,-9.141)
N3: (45.605,-64.543,-7.224)
N7: (43.219,-67.191,-6.772)
N9: (44.447,-65.836,-5.493)
O5': (44.326,-67.779,-1.525)
O3': (42.475,-64.044,-1.783)
Image (generated by PyMOL):