Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2515:A2410
Extra
PDB:
ATOM 1 O3' U A2514 65.883 -50.103 -2.423 1.00 44.56 O
ATOM 2 P C A2515 65.672 -51.602 -1.849 1.00 40.78 P
ATOM 3 OP1 C A2515 64.535 -52.262 -2.571 1.00 36.11 O
ATOM 4 OP2 C A2515 65.606 -51.404 -0.374 1.00 30.58 O
ATOM 5 O5' C A2515 66.991 -52.469 -2.095 1.00 41.72 O
ATOM 6 C5' C A2515 66.878 -53.807 -2.594 1.00 47.31 C
ATOM 7 C4' C A2515 67.695 -54.779 -1.777 1.00 44.37 C
ATOM 8 O4' C A2515 69.074 -54.317 -1.709 1.00 42.01 O
ATOM 9 C3' C A2515 67.272 -55.061 -0.336 1.00 41.18 C
ATOM 10 O3' C A2515 67.518 -56.444 -0.107 1.00 48.12 O
ATOM 11 C2' C A2515 68.321 -54.309 0.481 1.00 40.21 C
ATOM 12 O2' C A2515 68.615 -54.865 1.742 1.00 39.74 O
ATOM 13 C1' C A2515 69.547 -54.505 -0.397 1.00 42.10 C
ATOM 14 N1 C A2515 70.725 -53.644 -0.112 1.00 47.80 N
ATOM 15 C2 C A2515 72.012 -54.254 -0.020 1.00 50.65 C
ATOM 16 O2 C A2515 72.142 -55.466 -0.291 1.00 47.41 O
ATOM 17 N3 C A2515 73.073 -53.505 0.353 1.00 45.17 N
ATOM 18 C4 C A2515 72.911 -52.207 0.609 1.00 45.86 C
ATOM 19 N4 C A2515 73.976 -51.516 1.008 1.00 46.23 N
ATOM 20 C5 C A2515 71.645 -51.557 0.474 1.00 48.88 C
ATOM 21 C6 C A2515 70.590 -52.303 0.111 1.00 45.60 C
ATOM 22 P U A2516 66.305 -57.470 0.157 1.00 63.98 P
ATOM 23 OP1 U A2516 65.460 -57.049 1.315 1.00 53.74 O
ATOM 24 OP2 U A2516 66.940 -58.817 0.172 1.00 52.35 O
ATOM 25 O5' U A2516 65.429 -57.341 -1.170 1.00 52.07 O
TER
ATOM 1 O3' U B2409 81.242 -63.785 -4.537 1.00 35.47 O
ATOM 2 P G B2410 80.345 -62.696 -5.325 1.00 41.43 P
ATOM 3 OP1 G B2410 79.076 -63.362 -5.794 1.00 36.51 O
ATOM 4 OP2 G B2410 81.229 -62.007 -6.313 1.00 29.78 O
ATOM 5 O5' G B2410 79.996 -61.571 -4.241 1.00 43.04 O
ATOM 6 C5' G B2410 80.949 -61.142 -3.262 1.00 40.15 C
ATOM 7 C4' G B2410 80.943 -59.629 -3.125 1.00 37.48 C
ATOM 8 O4' G B2410 79.648 -59.081 -3.490 1.00 47.27 O
ATOM 9 C3' G B2410 81.152 -59.144 -1.704 1.00 37.69 C
ATOM 10 O3' G B2410 82.497 -59.118 -1.273 1.00 45.07 O
ATOM 11 C2' G B2410 80.507 -57.766 -1.711 1.00 44.01 C
ATOM 12 O2' G B2410 81.341 -56.763 -2.248 1.00 46.00 O
ATOM 13 C1' G B2410 79.310 -57.999 -2.630 1.00 48.31 C
ATOM 14 N9 G B2410 78.113 -58.362 -1.868 1.00 45.85 N
ATOM 15 C8 G B2410 77.757 -59.625 -1.454 1.00 45.06 C
ATOM 16 N7 G B2410 76.641 -59.650 -0.777 1.00 46.28 N
ATOM 17 C5 G B2410 76.228 -58.325 -0.740 1.00 43.90 C
ATOM 18 C6 G B2410 75.074 -57.741 -0.153 1.00 45.34 C
ATOM 19 O6 G B2410 74.159 -58.299 0.476 1.00 49.95 O
ATOM 20 N1 G B2410 75.035 -56.370 -0.357 1.00 43.26 N
ATOM 21 C2 G B2410 75.977 -55.649 -1.043 1.00 41.29 C
ATOM 22 N2 G B2410 75.739 -54.330 -1.138 1.00 47.00 N
ATOM 23 N3 G B2410 77.064 -56.178 -1.596 1.00 43.11 N
ATOM 24 C4 G B2410 77.123 -57.513 -1.408 1.00 43.60 C
ATOM 25 P U B2411 82.817 -58.990 0.303 1.00 52.87 P
ATOM 26 OP1 U B2411 83.870 -59.983 0.681 1.00 41.47 O
ATOM 27 OP2 U B2411 81.495 -59.020 1.014 1.00 46.86 O
ATOM 28 O5' U B2411 83.446 -57.524 0.420 1.00 44.07 O
TER
ATOM 2 P C A2515 65.672 -51.602 -1.849 1.00 40.78 P
ATOM 3 OP1 C A2515 64.535 -52.262 -2.571 1.00 36.11 O
ATOM 4 OP2 C A2515 65.606 -51.404 -0.374 1.00 30.58 O
ATOM 5 O5' C A2515 66.991 -52.469 -2.095 1.00 41.72 O
ATOM 6 C5' C A2515 66.878 -53.807 -2.594 1.00 47.31 C
ATOM 7 C4' C A2515 67.695 -54.779 -1.777 1.00 44.37 C
ATOM 8 O4' C A2515 69.074 -54.317 -1.709 1.00 42.01 O
ATOM 9 C3' C A2515 67.272 -55.061 -0.336 1.00 41.18 C
ATOM 10 O3' C A2515 67.518 -56.444 -0.107 1.00 48.12 O
ATOM 11 C2' C A2515 68.321 -54.309 0.481 1.00 40.21 C
ATOM 12 O2' C A2515 68.615 -54.865 1.742 1.00 39.74 O
ATOM 13 C1' C A2515 69.547 -54.505 -0.397 1.00 42.10 C
ATOM 14 N1 C A2515 70.725 -53.644 -0.112 1.00 47.80 N
ATOM 15 C2 C A2515 72.012 -54.254 -0.020 1.00 50.65 C
ATOM 16 O2 C A2515 72.142 -55.466 -0.291 1.00 47.41 O
ATOM 17 N3 C A2515 73.073 -53.505 0.353 1.00 45.17 N
ATOM 18 C4 C A2515 72.911 -52.207 0.609 1.00 45.86 C
ATOM 19 N4 C A2515 73.976 -51.516 1.008 1.00 46.23 N
ATOM 20 C5 C A2515 71.645 -51.557 0.474 1.00 48.88 C
ATOM 21 C6 C A2515 70.590 -52.303 0.111 1.00 45.60 C
ATOM 22 P U A2516 66.305 -57.470 0.157 1.00 63.98 P
ATOM 23 OP1 U A2516 65.460 -57.049 1.315 1.00 53.74 O
ATOM 24 OP2 U A2516 66.940 -58.817 0.172 1.00 52.35 O
ATOM 25 O5' U A2516 65.429 -57.341 -1.170 1.00 52.07 O
TER
ATOM 1 O3' U B2409 81.242 -63.785 -4.537 1.00 35.47 O
ATOM 2 P G B2410 80.345 -62.696 -5.325 1.00 41.43 P
ATOM 3 OP1 G B2410 79.076 -63.362 -5.794 1.00 36.51 O
ATOM 4 OP2 G B2410 81.229 -62.007 -6.313 1.00 29.78 O
ATOM 5 O5' G B2410 79.996 -61.571 -4.241 1.00 43.04 O
ATOM 6 C5' G B2410 80.949 -61.142 -3.262 1.00 40.15 C
ATOM 7 C4' G B2410 80.943 -59.629 -3.125 1.00 37.48 C
ATOM 8 O4' G B2410 79.648 -59.081 -3.490 1.00 47.27 O
ATOM 9 C3' G B2410 81.152 -59.144 -1.704 1.00 37.69 C
ATOM 10 O3' G B2410 82.497 -59.118 -1.273 1.00 45.07 O
ATOM 11 C2' G B2410 80.507 -57.766 -1.711 1.00 44.01 C
ATOM 12 O2' G B2410 81.341 -56.763 -2.248 1.00 46.00 O
ATOM 13 C1' G B2410 79.310 -57.999 -2.630 1.00 48.31 C
ATOM 14 N9 G B2410 78.113 -58.362 -1.868 1.00 45.85 N
ATOM 15 C8 G B2410 77.757 -59.625 -1.454 1.00 45.06 C
ATOM 16 N7 G B2410 76.641 -59.650 -0.777 1.00 46.28 N
ATOM 17 C5 G B2410 76.228 -58.325 -0.740 1.00 43.90 C
ATOM 18 C6 G B2410 75.074 -57.741 -0.153 1.00 45.34 C
ATOM 19 O6 G B2410 74.159 -58.299 0.476 1.00 49.95 O
ATOM 20 N1 G B2410 75.035 -56.370 -0.357 1.00 43.26 N
ATOM 21 C2 G B2410 75.977 -55.649 -1.043 1.00 41.29 C
ATOM 22 N2 G B2410 75.739 -54.330 -1.138 1.00 47.00 N
ATOM 23 N3 G B2410 77.064 -56.178 -1.596 1.00 43.11 N
ATOM 24 C4 G B2410 77.123 -57.513 -1.408 1.00 43.60 C
ATOM 25 P U B2411 82.817 -58.990 0.303 1.00 52.87 P
ATOM 26 OP1 U B2411 83.870 -59.983 0.681 1.00 41.47 O
ATOM 27 OP2 U B2411 81.495 -59.020 1.014 1.00 46.86 O
ATOM 28 O5' U B2411 83.446 -57.524 0.420 1.00 44.07 O
TER
Atoms:
C2: (72.012,-54.254,-0.020)
OP1: (64.535,-52.262,-2.571)
OP2: (65.606,-51.404,-0.374)
C4: (72.911,-52.207,0.609)
O5': (66.991,-52.469,-2.095)
C3': (67.272,-55.061,-0.336)
C1': (69.547,-54.505,-0.397)
O4': (69.074,-54.317,-1.709)
C5': (66.878,-53.807,-2.594)
P: (65.672,-51.602,-1.849)
O2: (72.142,-55.466,-0.291)
C4': (67.695,-54.779,-1.777)
C2': (68.321,-54.309,0.481)
O2': (68.615,-54.865,1.742)
N1: (70.725,-53.644,-0.112)
N3: (73.073,-53.505,0.353)
N4: (73.976,-51.516,1.008)
C6: (70.590,-52.303,0.111)
C5: (71.645,-51.557,0.474)
O3': (67.518,-56.444,-0.107)
OP1: (64.535,-52.262,-2.571)
OP2: (65.606,-51.404,-0.374)
C4: (72.911,-52.207,0.609)
O5': (66.991,-52.469,-2.095)
C3': (67.272,-55.061,-0.336)
C1': (69.547,-54.505,-0.397)
O4': (69.074,-54.317,-1.709)
C5': (66.878,-53.807,-2.594)
P: (65.672,-51.602,-1.849)
O2: (72.142,-55.466,-0.291)
C4': (67.695,-54.779,-1.777)
C2': (68.321,-54.309,0.481)
O2': (68.615,-54.865,1.742)
N1: (70.725,-53.644,-0.112)
N3: (73.073,-53.505,0.353)
N4: (73.976,-51.516,1.008)
C6: (70.590,-52.303,0.111)
C5: (71.645,-51.557,0.474)
O3': (67.518,-56.444,-0.107)
OP1: (79.076,-63.362,-5.794)
OP2: (81.229,-62.007,-6.313)
C3': (81.152,-59.144,-1.704)
C1': (79.310,-57.999,-2.630)
C5': (80.949,-61.142,-3.262)
O6: (74.159,-58.299,0.476)
O4': (79.648,-59.081,-3.490)
C8: (77.757,-59.625,-1.454)
C2: (75.977,-55.649,-1.043)
C6: (75.074,-57.741,-0.153)
C5: (76.228,-58.325,-0.740)
C4: (77.123,-57.513,-1.408)
P: (80.345,-62.696,-5.325)
C4': (80.943,-59.629,-3.125)
C2': (80.507,-57.766,-1.711)
O2': (81.341,-56.763,-2.248)
N1: (75.035,-56.370,-0.357)
N2: (75.739,-54.330,-1.138)
N3: (77.064,-56.178,-1.596)
N7: (76.641,-59.650,-0.777)
N9: (78.113,-58.362,-1.868)
O5': (79.996,-61.571,-4.241)
O3': (82.497,-59.118,-1.273)
OP2: (81.229,-62.007,-6.313)
C3': (81.152,-59.144,-1.704)
C1': (79.310,-57.999,-2.630)
C5': (80.949,-61.142,-3.262)
O6: (74.159,-58.299,0.476)
O4': (79.648,-59.081,-3.490)
C8: (77.757,-59.625,-1.454)
C2: (75.977,-55.649,-1.043)
C6: (75.074,-57.741,-0.153)
C5: (76.228,-58.325,-0.740)
C4: (77.123,-57.513,-1.408)
P: (80.345,-62.696,-5.325)
C4': (80.943,-59.629,-3.125)
C2': (80.507,-57.766,-1.711)
O2': (81.341,-56.763,-2.248)
N1: (75.035,-56.370,-0.357)
N2: (75.739,-54.330,-1.138)
N3: (77.064,-56.178,-1.596)
N7: (76.641,-59.650,-0.777)
N9: (78.113,-58.362,-1.868)
O5': (79.996,-61.571,-4.241)
O3': (82.497,-59.118,-1.273)
Image (generated by PyMOL):