Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A1555:A1220
Extra
PDB:
ATOM 1 O3' A A1554 45.464 -63.198 -19.411 1.00 32.04 O
ATOM 2 P C A1555 44.380 -62.928 -18.248 1.00 28.61 P
ATOM 3 OP1 C A1555 43.045 -63.156 -18.847 1.00 43.41 O
ATOM 4 OP2 C A1555 44.671 -61.599 -17.686 1.00 33.19 O
ATOM 5 O5' C A1555 44.690 -64.058 -17.180 1.00 21.07 O
ATOM 6 C5' C A1555 44.464 -65.422 -17.488 1.00 25.19 C
ATOM 7 C4' C A1555 44.217 -66.249 -16.253 1.00 30.18 C
ATOM 8 O4' C A1555 45.413 -66.276 -15.445 1.00 28.18 O
ATOM 9 C3' C A1555 43.095 -65.763 -15.347 1.00 28.15 C
ATOM 10 O3' C A1555 42.408 -66.885 -14.805 1.00 33.68 O
ATOM 11 C2' C A1555 43.831 -65.050 -14.230 1.00 30.60 C
ATOM 12 O2' C A1555 43.153 -65.057 -12.993 1.00 43.39 O
ATOM 13 C1' C A1555 45.118 -65.843 -14.136 1.00 29.21 C
ATOM 14 N1 C A1555 46.232 -65.028 -13.627 1.00 35.50 N
ATOM 15 C2 C A1555 46.535 -65.085 -12.264 1.00 38.78 C
ATOM 16 O2 C A1555 45.927 -65.881 -11.536 1.00 41.65 O
ATOM 17 N3 C A1555 47.500 -64.294 -11.781 1.00 34.26 N
ATOM 18 C4 C A1555 48.112 -63.447 -12.583 1.00 30.19 C
ATOM 19 N4 C A1555 49.048 -62.667 -12.076 1.00 37.19 N
ATOM 20 C5 C A1555 47.814 -63.347 -13.954 1.00 36.43 C
ATOM 21 C6 C A1555 46.861 -64.138 -14.436 1.00 36.21 C
ATOM 22 P A A1556 40.868 -67.150 -15.183 1.00 22.99 P
ATOM 23 OP1 A A1556 40.685 -68.625 -15.269 1.00 31.01 O
ATOM 24 OP2 A A1556 40.581 -66.333 -16.388 1.00 29.55 O
ATOM 25 O5' A A1556 40.070 -66.563 -13.917 1.00 28.16 O
TER
ATOM 1 O3' C B1219 43.923 -69.558 -1.588 1.00 22.09 O
ATOM 2 P G B1220 43.900 -68.342 -0.528 1.00 24.47 P
ATOM 3 OP1 G B1220 44.899 -68.647 0.505 1.00 39.71 O
ATOM 4 OP2 G B1220 42.517 -68.116 -0.102 1.00 42.48 O
ATOM 5 O5' G B1220 44.379 -67.123 -1.395 1.00 28.84 O
ATOM 6 C5' G B1220 45.134 -66.099 -0.802 1.00 32.05 C
ATOM 7 C4' G B1220 45.183 -64.883 -1.664 1.00 32.64 C
ATOM 8 O4' G B1220 45.976 -65.139 -2.840 1.00 38.76 O
ATOM 9 C3' G B1220 43.867 -64.423 -2.208 1.00 35.08 C
ATOM 10 O3' G B1220 43.106 -63.718 -1.251 1.00 37.03 O
ATOM 11 C2' G B1220 44.288 -63.584 -3.400 1.00 36.98 C
ATOM 12 O2' G B1220 44.730 -62.298 -2.978 1.00 37.67 O
ATOM 13 C1' G B1220 45.497 -64.369 -3.906 1.00 34.78 C
ATOM 14 N9 G B1220 45.157 -65.272 -5.002 1.00 26.79 N
ATOM 15 C8 G B1220 44.463 -66.413 -4.867 1.00 43.69 C
ATOM 16 N7 G B1220 44.329 -67.026 -5.996 1.00 58.70 N
ATOM 17 C5 G B1220 44.990 -66.253 -6.909 1.00 43.39 C
ATOM 18 C6 G B1220 45.154 -66.448 -8.294 1.00 61.52 C
ATOM 19 O6 G B1220 44.722 -67.391 -8.987 1.00 77.96 O
ATOM 20 N1 G B1220 45.906 -65.418 -8.857 1.00 53.40 N
ATOM 21 C2 G B1220 46.414 -64.355 -8.164 1.00 42.83 C
ATOM 22 N2 G B1220 47.103 -63.466 -8.877 1.00 37.84 N
ATOM 23 N3 G B1220 46.250 -64.173 -6.868 1.00 49.32 N
ATOM 24 C4 G B1220 45.527 -65.163 -6.309 1.00 45.30 C
ATOM 25 P A B1221 41.541 -64.031 -1.090 1.00 45.26 P
ATOM 26 OP1 A B1221 41.369 -64.862 0.153 1.00 49.52 O
ATOM 27 OP2 A B1221 41.081 -64.583 -2.390 1.00 39.78 O
ATOM 28 O5' A B1221 40.932 -62.584 -0.866 1.00 53.35 O
TER
ATOM 2 P C A1555 44.380 -62.928 -18.248 1.00 28.61 P
ATOM 3 OP1 C A1555 43.045 -63.156 -18.847 1.00 43.41 O
ATOM 4 OP2 C A1555 44.671 -61.599 -17.686 1.00 33.19 O
ATOM 5 O5' C A1555 44.690 -64.058 -17.180 1.00 21.07 O
ATOM 6 C5' C A1555 44.464 -65.422 -17.488 1.00 25.19 C
ATOM 7 C4' C A1555 44.217 -66.249 -16.253 1.00 30.18 C
ATOM 8 O4' C A1555 45.413 -66.276 -15.445 1.00 28.18 O
ATOM 9 C3' C A1555 43.095 -65.763 -15.347 1.00 28.15 C
ATOM 10 O3' C A1555 42.408 -66.885 -14.805 1.00 33.68 O
ATOM 11 C2' C A1555 43.831 -65.050 -14.230 1.00 30.60 C
ATOM 12 O2' C A1555 43.153 -65.057 -12.993 1.00 43.39 O
ATOM 13 C1' C A1555 45.118 -65.843 -14.136 1.00 29.21 C
ATOM 14 N1 C A1555 46.232 -65.028 -13.627 1.00 35.50 N
ATOM 15 C2 C A1555 46.535 -65.085 -12.264 1.00 38.78 C
ATOM 16 O2 C A1555 45.927 -65.881 -11.536 1.00 41.65 O
ATOM 17 N3 C A1555 47.500 -64.294 -11.781 1.00 34.26 N
ATOM 18 C4 C A1555 48.112 -63.447 -12.583 1.00 30.19 C
ATOM 19 N4 C A1555 49.048 -62.667 -12.076 1.00 37.19 N
ATOM 20 C5 C A1555 47.814 -63.347 -13.954 1.00 36.43 C
ATOM 21 C6 C A1555 46.861 -64.138 -14.436 1.00 36.21 C
ATOM 22 P A A1556 40.868 -67.150 -15.183 1.00 22.99 P
ATOM 23 OP1 A A1556 40.685 -68.625 -15.269 1.00 31.01 O
ATOM 24 OP2 A A1556 40.581 -66.333 -16.388 1.00 29.55 O
ATOM 25 O5' A A1556 40.070 -66.563 -13.917 1.00 28.16 O
TER
ATOM 1 O3' C B1219 43.923 -69.558 -1.588 1.00 22.09 O
ATOM 2 P G B1220 43.900 -68.342 -0.528 1.00 24.47 P
ATOM 3 OP1 G B1220 44.899 -68.647 0.505 1.00 39.71 O
ATOM 4 OP2 G B1220 42.517 -68.116 -0.102 1.00 42.48 O
ATOM 5 O5' G B1220 44.379 -67.123 -1.395 1.00 28.84 O
ATOM 6 C5' G B1220 45.134 -66.099 -0.802 1.00 32.05 C
ATOM 7 C4' G B1220 45.183 -64.883 -1.664 1.00 32.64 C
ATOM 8 O4' G B1220 45.976 -65.139 -2.840 1.00 38.76 O
ATOM 9 C3' G B1220 43.867 -64.423 -2.208 1.00 35.08 C
ATOM 10 O3' G B1220 43.106 -63.718 -1.251 1.00 37.03 O
ATOM 11 C2' G B1220 44.288 -63.584 -3.400 1.00 36.98 C
ATOM 12 O2' G B1220 44.730 -62.298 -2.978 1.00 37.67 O
ATOM 13 C1' G B1220 45.497 -64.369 -3.906 1.00 34.78 C
ATOM 14 N9 G B1220 45.157 -65.272 -5.002 1.00 26.79 N
ATOM 15 C8 G B1220 44.463 -66.413 -4.867 1.00 43.69 C
ATOM 16 N7 G B1220 44.329 -67.026 -5.996 1.00 58.70 N
ATOM 17 C5 G B1220 44.990 -66.253 -6.909 1.00 43.39 C
ATOM 18 C6 G B1220 45.154 -66.448 -8.294 1.00 61.52 C
ATOM 19 O6 G B1220 44.722 -67.391 -8.987 1.00 77.96 O
ATOM 20 N1 G B1220 45.906 -65.418 -8.857 1.00 53.40 N
ATOM 21 C2 G B1220 46.414 -64.355 -8.164 1.00 42.83 C
ATOM 22 N2 G B1220 47.103 -63.466 -8.877 1.00 37.84 N
ATOM 23 N3 G B1220 46.250 -64.173 -6.868 1.00 49.32 N
ATOM 24 C4 G B1220 45.527 -65.163 -6.309 1.00 45.30 C
ATOM 25 P A B1221 41.541 -64.031 -1.090 1.00 45.26 P
ATOM 26 OP1 A B1221 41.369 -64.862 0.153 1.00 49.52 O
ATOM 27 OP2 A B1221 41.081 -64.583 -2.390 1.00 39.78 O
ATOM 28 O5' A B1221 40.932 -62.584 -0.866 1.00 53.35 O
TER
Atoms:
C2: (46.535,-65.085,-12.264)
OP1: (43.045,-63.156,-18.847)
OP2: (44.671,-61.599,-17.686)
C4: (48.112,-63.447,-12.583)
O5': (44.690,-64.058,-17.180)
C3': (43.095,-65.763,-15.347)
C1': (45.118,-65.843,-14.136)
O4': (45.413,-66.276,-15.445)
C5': (44.464,-65.422,-17.488)
P: (44.380,-62.928,-18.248)
O2: (45.927,-65.881,-11.536)
C4': (44.217,-66.249,-16.253)
C2': (43.831,-65.050,-14.230)
O2': (43.153,-65.057,-12.993)
N1: (46.232,-65.028,-13.627)
N3: (47.500,-64.294,-11.781)
N4: (49.048,-62.667,-12.076)
C6: (46.861,-64.138,-14.436)
C5: (47.814,-63.347,-13.954)
O3': (42.408,-66.885,-14.805)
OP1: (43.045,-63.156,-18.847)
OP2: (44.671,-61.599,-17.686)
C4: (48.112,-63.447,-12.583)
O5': (44.690,-64.058,-17.180)
C3': (43.095,-65.763,-15.347)
C1': (45.118,-65.843,-14.136)
O4': (45.413,-66.276,-15.445)
C5': (44.464,-65.422,-17.488)
P: (44.380,-62.928,-18.248)
O2: (45.927,-65.881,-11.536)
C4': (44.217,-66.249,-16.253)
C2': (43.831,-65.050,-14.230)
O2': (43.153,-65.057,-12.993)
N1: (46.232,-65.028,-13.627)
N3: (47.500,-64.294,-11.781)
N4: (49.048,-62.667,-12.076)
C6: (46.861,-64.138,-14.436)
C5: (47.814,-63.347,-13.954)
O3': (42.408,-66.885,-14.805)
OP1: (44.899,-68.647,0.505)
OP2: (42.517,-68.116,-0.102)
C3': (43.867,-64.423,-2.208)
C1': (45.497,-64.369,-3.906)
C5': (45.134,-66.099,-0.802)
O6: (44.722,-67.391,-8.987)
O4': (45.976,-65.139,-2.840)
C8: (44.463,-66.413,-4.867)
C2: (46.414,-64.355,-8.164)
C6: (45.154,-66.448,-8.294)
C5: (44.990,-66.253,-6.909)
C4: (45.527,-65.163,-6.309)
P: (43.900,-68.342,-0.528)
C4': (45.183,-64.883,-1.664)
C2': (44.288,-63.584,-3.400)
O2': (44.730,-62.298,-2.978)
N1: (45.906,-65.418,-8.857)
N2: (47.103,-63.466,-8.877)
N3: (46.250,-64.173,-6.868)
N7: (44.329,-67.026,-5.996)
N9: (45.157,-65.272,-5.002)
O5': (44.379,-67.123,-1.395)
O3': (43.106,-63.718,-1.251)
OP2: (42.517,-68.116,-0.102)
C3': (43.867,-64.423,-2.208)
C1': (45.497,-64.369,-3.906)
C5': (45.134,-66.099,-0.802)
O6: (44.722,-67.391,-8.987)
O4': (45.976,-65.139,-2.840)
C8: (44.463,-66.413,-4.867)
C2: (46.414,-64.355,-8.164)
C6: (45.154,-66.448,-8.294)
C5: (44.990,-66.253,-6.909)
C4: (45.527,-65.163,-6.309)
P: (43.900,-68.342,-0.528)
C4': (45.183,-64.883,-1.664)
C2': (44.288,-63.584,-3.400)
O2': (44.730,-62.298,-2.978)
N1: (45.906,-65.418,-8.857)
N2: (47.103,-63.466,-8.877)
N3: (46.250,-64.173,-6.868)
N7: (44.329,-67.026,-5.996)
N9: (45.157,-65.272,-5.002)
O5': (44.379,-67.123,-1.395)
O3': (43.106,-63.718,-1.251)
Image (generated by PyMOL):