Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A1237:A1238
Extra
PDB:
ATOM 1 O3' C A1236 10.472 87.336 59.114 1.00 61.92 O
ATOM 2 P A A1237 10.489 87.276 60.713 1.00 63.43 P
ATOM 3 OP1 A A1237 11.681 86.525 61.175 1.00 61.22 O
ATOM 4 OP2 A A1237 9.138 86.841 61.130 1.00 64.50 O
ATOM 5 O5' A A1237 10.687 88.796 61.129 1.00 67.23 O
ATOM 6 C5' A A1237 11.950 89.448 60.930 1.00 72.43 C
ATOM 7 C4' A A1237 11.846 90.883 61.338 1.00 75.80 C
ATOM 8 O4' A A1237 10.901 91.539 60.462 1.00 76.33 O
ATOM 9 C3' A A1237 11.276 91.099 62.728 1.00 79.39 C
ATOM 10 O3' A A1237 12.282 90.973 63.725 1.00 86.47 O
ATOM 11 C2' A A1237 10.719 92.510 62.625 1.00 78.12 C
ATOM 12 O2' A A1237 11.715 93.503 62.720 1.00 78.25 O
ATOM 13 C1' A A1237 10.180 92.512 61.193 1.00 76.13 C
ATOM 14 N9 A A1237 8.755 92.205 61.098 1.00 73.63 N
ATOM 15 C8 A A1237 8.112 90.990 61.137 1.00 72.25 C
ATOM 16 N7 A A1237 6.812 91.082 61.035 1.00 71.86 N
ATOM 17 C5 A A1237 6.584 92.447 60.916 1.00 73.11 C
ATOM 18 C6 A A1237 5.406 93.207 60.775 1.00 73.81 C
ATOM 19 N6 A A1237 4.182 92.679 60.725 1.00 75.23 N
ATOM 20 N1 A A1237 5.532 94.549 60.686 1.00 74.40 N
ATOM 21 C2 A A1237 6.759 95.081 60.736 1.00 73.92 C
ATOM 22 N3 A A1237 7.934 94.474 60.867 1.00 73.56 N
ATOM 23 C4 A A1237 7.772 93.145 60.951 1.00 72.93 C
ATOM 24 P U A1238 11.923 90.334 65.160 1.00 92.24 P
ATOM 25 OP1 U A1238 12.070 88.854 65.020 1.00 91.00 O
ATOM 26 OP2 U A1238 10.633 90.906 65.639 1.00 92.04 O
ATOM 27 O5' U A1238 13.092 90.870 66.109 1.00 96.47 O
TER
ATOM 1 O3' A B1237 12.282 90.973 63.725 1.00 86.47 O
ATOM 2 P U B1238 11.923 90.334 65.160 1.00 92.24 P
ATOM 3 OP1 U B1238 12.070 88.854 65.020 1.00 91.00 O
ATOM 4 OP2 U B1238 10.633 90.906 65.639 1.00 92.04 O
ATOM 5 O5' U B1238 13.092 90.870 66.109 1.00 96.47 O
ATOM 6 C5' U B1238 12.855 91.888 67.135 1.00103.34 C
ATOM 7 C4' U B1238 13.689 93.137 66.857 1.00107.45 C
ATOM 8 O4' U B1238 14.914 92.731 66.178 1.00109.50 O
ATOM 9 C3' U B1238 13.053 94.170 65.925 1.00108.66 C
ATOM 10 O3' U B1238 12.292 95.133 66.651 1.00107.90 O
ATOM 11 C2' U B1238 14.254 94.839 65.270 1.00109.92 C
ATOM 12 O2' U B1238 14.803 95.880 66.054 1.00109.67 O
ATOM 13 C1' U B1238 15.235 93.663 65.149 1.00111.31 C
ATOM 14 N1 U B1238 15.240 92.952 63.849 1.00113.03 N
ATOM 15 C2 U B1238 15.295 93.707 62.669 1.00114.03 C
ATOM 16 O2 U B1238 15.338 94.934 62.653 1.00114.51 O
ATOM 17 N3 U B1238 15.302 92.969 61.509 1.00114.45 N
ATOM 18 C4 U B1238 15.263 91.592 61.392 1.00114.33 C
ATOM 19 O4 U B1238 15.288 91.078 60.269 1.00114.70 O
ATOM 20 C5 U B1238 15.209 90.886 62.638 1.00113.75 C
ATOM 21 C6 U B1238 15.199 91.568 63.792 1.00113.04 C
ATOM 22 P A B1239 10.708 95.245 66.419 1.00108.32 P
ATOM 23 OP1 A B1239 10.185 96.143 67.479 1.00108.36 O
ATOM 24 OP2 A B1239 10.164 93.867 66.293 1.00108.81 O
ATOM 25 O5' A B1239 10.555 95.956 65.000 1.00105.72 O
TER
ATOM 2 P A A1237 10.489 87.276 60.713 1.00 63.43 P
ATOM 3 OP1 A A1237 11.681 86.525 61.175 1.00 61.22 O
ATOM 4 OP2 A A1237 9.138 86.841 61.130 1.00 64.50 O
ATOM 5 O5' A A1237 10.687 88.796 61.129 1.00 67.23 O
ATOM 6 C5' A A1237 11.950 89.448 60.930 1.00 72.43 C
ATOM 7 C4' A A1237 11.846 90.883 61.338 1.00 75.80 C
ATOM 8 O4' A A1237 10.901 91.539 60.462 1.00 76.33 O
ATOM 9 C3' A A1237 11.276 91.099 62.728 1.00 79.39 C
ATOM 10 O3' A A1237 12.282 90.973 63.725 1.00 86.47 O
ATOM 11 C2' A A1237 10.719 92.510 62.625 1.00 78.12 C
ATOM 12 O2' A A1237 11.715 93.503 62.720 1.00 78.25 O
ATOM 13 C1' A A1237 10.180 92.512 61.193 1.00 76.13 C
ATOM 14 N9 A A1237 8.755 92.205 61.098 1.00 73.63 N
ATOM 15 C8 A A1237 8.112 90.990 61.137 1.00 72.25 C
ATOM 16 N7 A A1237 6.812 91.082 61.035 1.00 71.86 N
ATOM 17 C5 A A1237 6.584 92.447 60.916 1.00 73.11 C
ATOM 18 C6 A A1237 5.406 93.207 60.775 1.00 73.81 C
ATOM 19 N6 A A1237 4.182 92.679 60.725 1.00 75.23 N
ATOM 20 N1 A A1237 5.532 94.549 60.686 1.00 74.40 N
ATOM 21 C2 A A1237 6.759 95.081 60.736 1.00 73.92 C
ATOM 22 N3 A A1237 7.934 94.474 60.867 1.00 73.56 N
ATOM 23 C4 A A1237 7.772 93.145 60.951 1.00 72.93 C
ATOM 24 P U A1238 11.923 90.334 65.160 1.00 92.24 P
ATOM 25 OP1 U A1238 12.070 88.854 65.020 1.00 91.00 O
ATOM 26 OP2 U A1238 10.633 90.906 65.639 1.00 92.04 O
ATOM 27 O5' U A1238 13.092 90.870 66.109 1.00 96.47 O
TER
ATOM 1 O3' A B1237 12.282 90.973 63.725 1.00 86.47 O
ATOM 2 P U B1238 11.923 90.334 65.160 1.00 92.24 P
ATOM 3 OP1 U B1238 12.070 88.854 65.020 1.00 91.00 O
ATOM 4 OP2 U B1238 10.633 90.906 65.639 1.00 92.04 O
ATOM 5 O5' U B1238 13.092 90.870 66.109 1.00 96.47 O
ATOM 6 C5' U B1238 12.855 91.888 67.135 1.00103.34 C
ATOM 7 C4' U B1238 13.689 93.137 66.857 1.00107.45 C
ATOM 8 O4' U B1238 14.914 92.731 66.178 1.00109.50 O
ATOM 9 C3' U B1238 13.053 94.170 65.925 1.00108.66 C
ATOM 10 O3' U B1238 12.292 95.133 66.651 1.00107.90 O
ATOM 11 C2' U B1238 14.254 94.839 65.270 1.00109.92 C
ATOM 12 O2' U B1238 14.803 95.880 66.054 1.00109.67 O
ATOM 13 C1' U B1238 15.235 93.663 65.149 1.00111.31 C
ATOM 14 N1 U B1238 15.240 92.952 63.849 1.00113.03 N
ATOM 15 C2 U B1238 15.295 93.707 62.669 1.00114.03 C
ATOM 16 O2 U B1238 15.338 94.934 62.653 1.00114.51 O
ATOM 17 N3 U B1238 15.302 92.969 61.509 1.00114.45 N
ATOM 18 C4 U B1238 15.263 91.592 61.392 1.00114.33 C
ATOM 19 O4 U B1238 15.288 91.078 60.269 1.00114.70 O
ATOM 20 C5 U B1238 15.209 90.886 62.638 1.00113.75 C
ATOM 21 C6 U B1238 15.199 91.568 63.792 1.00113.04 C
ATOM 22 P A B1239 10.708 95.245 66.419 1.00108.32 P
ATOM 23 OP1 A B1239 10.185 96.143 67.479 1.00108.36 O
ATOM 24 OP2 A B1239 10.164 93.867 66.293 1.00108.81 O
ATOM 25 O5' A B1239 10.555 95.956 65.000 1.00105.72 O
TER
Atoms:
OP1: (11.681,86.525,61.175)
OP2: (9.138,86.841,61.130)
C3': (11.276,91.099,62.728)
C1': (10.180,92.512,61.193)
C5': (11.950,89.448,60.930)
O4': (10.901,91.539,60.462)
C8: (8.112,90.990,61.137)
O2': (11.715,93.503,62.720)
C6: (5.406,93.207,60.775)
C5: (6.584,92.447,60.916)
C4: (7.772,93.145,60.951)
P: (10.489,87.276,60.713)
C4': (11.846,90.883,61.338)
C2': (10.719,92.510,62.625)
C2: (6.759,95.081,60.736)
N1: (5.532,94.549,60.686)
N3: (7.934,94.474,60.867)
N6: (4.182,92.679,60.725)
N7: (6.812,91.082,61.035)
N9: (8.755,92.205,61.098)
O5': (10.687,88.796,61.129)
O3': (12.282,90.973,63.725)
OP2: (9.138,86.841,61.130)
C3': (11.276,91.099,62.728)
C1': (10.180,92.512,61.193)
C5': (11.950,89.448,60.930)
O4': (10.901,91.539,60.462)
C8: (8.112,90.990,61.137)
O2': (11.715,93.503,62.720)
C6: (5.406,93.207,60.775)
C5: (6.584,92.447,60.916)
C4: (7.772,93.145,60.951)
P: (10.489,87.276,60.713)
C4': (11.846,90.883,61.338)
C2': (10.719,92.510,62.625)
C2: (6.759,95.081,60.736)
N1: (5.532,94.549,60.686)
N3: (7.934,94.474,60.867)
N6: (4.182,92.679,60.725)
N7: (6.812,91.082,61.035)
N9: (8.755,92.205,61.098)
O5': (10.687,88.796,61.129)
O3': (12.282,90.973,63.725)
C4: (15.263,91.592,61.392)
N3: (15.302,92.969,61.509)
OP1: (12.070,88.854,65.020)
OP2: (10.633,90.906,65.639)
C2: (15.295,93.707,62.669)
C1': (15.235,93.663,65.149)
C3': (13.053,94.170,65.925)
O5': (13.092,90.870,66.109)
O4': (14.914,92.731,66.178)
C5': (12.855,91.888,67.135)
P: (11.923,90.334,65.160)
C4': (13.689,93.137,66.857)
C2': (14.254,94.839,65.270)
O2': (14.803,95.880,66.054)
N1: (15.240,92.952,63.849)
O4: (15.288,91.078,60.269)
O2: (15.338,94.934,62.653)
C6: (15.199,91.568,63.792)
C5: (15.209,90.886,62.638)
O3': (12.292,95.133,66.651)
N3: (15.302,92.969,61.509)
OP1: (12.070,88.854,65.020)
OP2: (10.633,90.906,65.639)
C2: (15.295,93.707,62.669)
C1': (15.235,93.663,65.149)
C3': (13.053,94.170,65.925)
O5': (13.092,90.870,66.109)
O4': (14.914,92.731,66.178)
C5': (12.855,91.888,67.135)
P: (11.923,90.334,65.160)
C4': (13.689,93.137,66.857)
C2': (14.254,94.839,65.270)
O2': (14.803,95.880,66.054)
N1: (15.240,92.952,63.849)
O4: (15.288,91.078,60.269)
O2: (15.338,94.934,62.653)
C6: (15.199,91.568,63.792)
C5: (15.209,90.886,62.638)
O3': (12.292,95.133,66.651)
Image (generated by PyMOL):