Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A1237:A1238
Extra
PDB:
ATOM 1 O3' C A1236 10.458 87.067 58.970 1.00 63.25 O
ATOM 2 P A A1237 10.439 87.038 60.565 1.00 63.90 P
ATOM 3 OP1 A A1237 11.635 86.290 61.028 1.00 63.66 O
ATOM 4 OP2 A A1237 9.084 86.607 61.001 1.00 64.38 O
ATOM 5 O5' A A1237 10.662 88.560 60.963 1.00 66.88 O
ATOM 6 C5' A A1237 11.950 89.170 60.789 1.00 71.27 C
ATOM 7 C4' A A1237 11.894 90.609 61.209 1.00 73.84 C
ATOM 8 O4' A A1237 10.983 91.305 60.325 1.00 73.06 O
ATOM 9 C3' A A1237 11.324 90.833 62.599 1.00 76.78 C
ATOM 10 O3' A A1237 12.337 90.680 63.586 1.00 83.14 O
ATOM 11 C2' A A1237 10.784 92.254 62.497 1.00 75.36 C
ATOM 12 O2' A A1237 11.796 93.233 62.599 1.00 75.64 O
ATOM 13 C1' A A1237 10.257 92.268 61.058 1.00 72.88 C
ATOM 14 N9 A A1237 8.832 91.964 60.929 1.00 70.34 N
ATOM 15 C8 A A1237 8.194 90.746 60.936 1.00 69.42 C
ATOM 16 N7 A A1237 6.890 90.832 60.838 1.00 68.10 N
ATOM 17 C5 A A1237 6.654 92.198 60.755 1.00 69.56 C
ATOM 18 C6 A A1237 5.467 92.955 60.655 1.00 69.98 C
ATOM 19 N6 A A1237 4.246 92.417 60.647 1.00 70.30 N
ATOM 20 N1 A A1237 5.584 94.302 60.576 1.00 69.62 N
ATOM 21 C2 A A1237 6.813 94.840 60.612 1.00 68.92 C
ATOM 22 N3 A A1237 7.995 94.237 60.720 1.00 69.53 N
ATOM 23 C4 A A1237 7.843 92.903 60.789 1.00 69.60 C
ATOM 24 P U A1238 11.976 90.050 65.022 1.00 88.84 P
ATOM 25 OP1 U A1238 12.101 88.563 64.890 1.00 87.33 O
ATOM 26 OP2 U A1238 10.687 90.643 65.467 1.00 88.76 O
ATOM 27 O5' U A1238 13.152 90.589 65.967 1.00 93.39 O
TER
ATOM 1 O3' A B1237 12.337 90.680 63.586 1.00 83.14 O
ATOM 2 P U B1238 11.976 90.050 65.022 1.00 88.84 P
ATOM 3 OP1 U B1238 12.101 88.563 64.890 1.00 87.33 O
ATOM 4 OP2 U B1238 10.687 90.643 65.467 1.00 88.76 O
ATOM 5 O5' U B1238 13.152 90.589 65.967 1.00 93.39 O
ATOM 6 C5' U B1238 12.926 91.589 67.012 1.00100.15 C
ATOM 7 C4' U B1238 13.768 92.839 66.763 1.00104.68 C
ATOM 8 O4' U B1238 15.008 92.454 66.099 1.00107.15 O
ATOM 9 C3' U B1238 13.135 93.869 65.831 1.00106.22 C
ATOM 10 O3' U B1238 12.356 94.814 66.555 1.00105.50 O
ATOM 11 C2' U B1238 14.334 94.554 65.189 1.00107.88 C
ATOM 12 O2' U B1238 14.863 95.601 65.979 1.00107.53 O
ATOM 13 C1' U B1238 15.331 93.391 65.071 1.00109.12 C
ATOM 14 N1 U B1238 15.350 92.680 63.770 1.00111.15 N
ATOM 15 C2 U B1238 15.426 93.429 62.584 1.00112.06 C
ATOM 16 O2 U B1238 15.500 94.653 62.560 1.00112.38 O
ATOM 17 N3 U B1238 15.420 92.685 61.426 1.00112.58 N
ATOM 18 C4 U B1238 15.358 91.308 61.314 1.00112.44 C
ATOM 19 O4 U B1238 15.352 90.789 60.195 1.00112.97 O
ATOM 20 C5 U B1238 15.300 90.608 62.564 1.00111.76 C
ATOM 21 C6 U B1238 15.297 91.295 63.716 1.00111.25 C
ATOM 22 P A B1239 10.776 94.908 66.307 1.00105.17 P
ATOM 23 OP1 A B1239 10.241 95.768 67.394 1.00105.07 O
ATOM 24 OP2 A B1239 10.254 93.529 66.143 1.00105.43 O
ATOM 25 O5' A B1239 10.622 95.655 64.904 1.00102.42 O
TER
ATOM 2 P A A1237 10.439 87.038 60.565 1.00 63.90 P
ATOM 3 OP1 A A1237 11.635 86.290 61.028 1.00 63.66 O
ATOM 4 OP2 A A1237 9.084 86.607 61.001 1.00 64.38 O
ATOM 5 O5' A A1237 10.662 88.560 60.963 1.00 66.88 O
ATOM 6 C5' A A1237 11.950 89.170 60.789 1.00 71.27 C
ATOM 7 C4' A A1237 11.894 90.609 61.209 1.00 73.84 C
ATOM 8 O4' A A1237 10.983 91.305 60.325 1.00 73.06 O
ATOM 9 C3' A A1237 11.324 90.833 62.599 1.00 76.78 C
ATOM 10 O3' A A1237 12.337 90.680 63.586 1.00 83.14 O
ATOM 11 C2' A A1237 10.784 92.254 62.497 1.00 75.36 C
ATOM 12 O2' A A1237 11.796 93.233 62.599 1.00 75.64 O
ATOM 13 C1' A A1237 10.257 92.268 61.058 1.00 72.88 C
ATOM 14 N9 A A1237 8.832 91.964 60.929 1.00 70.34 N
ATOM 15 C8 A A1237 8.194 90.746 60.936 1.00 69.42 C
ATOM 16 N7 A A1237 6.890 90.832 60.838 1.00 68.10 N
ATOM 17 C5 A A1237 6.654 92.198 60.755 1.00 69.56 C
ATOM 18 C6 A A1237 5.467 92.955 60.655 1.00 69.98 C
ATOM 19 N6 A A1237 4.246 92.417 60.647 1.00 70.30 N
ATOM 20 N1 A A1237 5.584 94.302 60.576 1.00 69.62 N
ATOM 21 C2 A A1237 6.813 94.840 60.612 1.00 68.92 C
ATOM 22 N3 A A1237 7.995 94.237 60.720 1.00 69.53 N
ATOM 23 C4 A A1237 7.843 92.903 60.789 1.00 69.60 C
ATOM 24 P U A1238 11.976 90.050 65.022 1.00 88.84 P
ATOM 25 OP1 U A1238 12.101 88.563 64.890 1.00 87.33 O
ATOM 26 OP2 U A1238 10.687 90.643 65.467 1.00 88.76 O
ATOM 27 O5' U A1238 13.152 90.589 65.967 1.00 93.39 O
TER
ATOM 1 O3' A B1237 12.337 90.680 63.586 1.00 83.14 O
ATOM 2 P U B1238 11.976 90.050 65.022 1.00 88.84 P
ATOM 3 OP1 U B1238 12.101 88.563 64.890 1.00 87.33 O
ATOM 4 OP2 U B1238 10.687 90.643 65.467 1.00 88.76 O
ATOM 5 O5' U B1238 13.152 90.589 65.967 1.00 93.39 O
ATOM 6 C5' U B1238 12.926 91.589 67.012 1.00100.15 C
ATOM 7 C4' U B1238 13.768 92.839 66.763 1.00104.68 C
ATOM 8 O4' U B1238 15.008 92.454 66.099 1.00107.15 O
ATOM 9 C3' U B1238 13.135 93.869 65.831 1.00106.22 C
ATOM 10 O3' U B1238 12.356 94.814 66.555 1.00105.50 O
ATOM 11 C2' U B1238 14.334 94.554 65.189 1.00107.88 C
ATOM 12 O2' U B1238 14.863 95.601 65.979 1.00107.53 O
ATOM 13 C1' U B1238 15.331 93.391 65.071 1.00109.12 C
ATOM 14 N1 U B1238 15.350 92.680 63.770 1.00111.15 N
ATOM 15 C2 U B1238 15.426 93.429 62.584 1.00112.06 C
ATOM 16 O2 U B1238 15.500 94.653 62.560 1.00112.38 O
ATOM 17 N3 U B1238 15.420 92.685 61.426 1.00112.58 N
ATOM 18 C4 U B1238 15.358 91.308 61.314 1.00112.44 C
ATOM 19 O4 U B1238 15.352 90.789 60.195 1.00112.97 O
ATOM 20 C5 U B1238 15.300 90.608 62.564 1.00111.76 C
ATOM 21 C6 U B1238 15.297 91.295 63.716 1.00111.25 C
ATOM 22 P A B1239 10.776 94.908 66.307 1.00105.17 P
ATOM 23 OP1 A B1239 10.241 95.768 67.394 1.00105.07 O
ATOM 24 OP2 A B1239 10.254 93.529 66.143 1.00105.43 O
ATOM 25 O5' A B1239 10.622 95.655 64.904 1.00102.42 O
TER
Atoms:
OP1: (11.635,86.290,61.028)
OP2: (9.084,86.607,61.001)
C3': (11.324,90.833,62.599)
C1': (10.257,92.268,61.058)
C5': (11.950,89.170,60.789)
O4': (10.983,91.305,60.325)
C8: (8.194,90.746,60.936)
O2': (11.796,93.233,62.599)
C6: (5.467,92.955,60.655)
C5: (6.654,92.198,60.755)
C4: (7.843,92.903,60.789)
P: (10.439,87.038,60.565)
C4': (11.894,90.609,61.209)
C2': (10.784,92.254,62.497)
C2: (6.813,94.840,60.612)
N1: (5.584,94.302,60.576)
N3: (7.995,94.237,60.720)
N6: (4.246,92.417,60.647)
N7: (6.890,90.832,60.838)
N9: (8.832,91.964,60.929)
O5': (10.662,88.560,60.963)
O3': (12.337,90.680,63.586)
OP2: (9.084,86.607,61.001)
C3': (11.324,90.833,62.599)
C1': (10.257,92.268,61.058)
C5': (11.950,89.170,60.789)
O4': (10.983,91.305,60.325)
C8: (8.194,90.746,60.936)
O2': (11.796,93.233,62.599)
C6: (5.467,92.955,60.655)
C5: (6.654,92.198,60.755)
C4: (7.843,92.903,60.789)
P: (10.439,87.038,60.565)
C4': (11.894,90.609,61.209)
C2': (10.784,92.254,62.497)
C2: (6.813,94.840,60.612)
N1: (5.584,94.302,60.576)
N3: (7.995,94.237,60.720)
N6: (4.246,92.417,60.647)
N7: (6.890,90.832,60.838)
N9: (8.832,91.964,60.929)
O5': (10.662,88.560,60.963)
O3': (12.337,90.680,63.586)
C4: (15.358,91.308,61.314)
N3: (15.420,92.685,61.426)
OP1: (12.101,88.563,64.890)
OP2: (10.687,90.643,65.467)
C2: (15.426,93.429,62.584)
C1': (15.331,93.391,65.071)
C3': (13.135,93.869,65.831)
O5': (13.152,90.589,65.967)
O4': (15.008,92.454,66.099)
C5': (12.926,91.589,67.012)
P: (11.976,90.050,65.022)
C4': (13.768,92.839,66.763)
C2': (14.334,94.554,65.189)
O2': (14.863,95.601,65.979)
N1: (15.350,92.680,63.770)
O4: (15.352,90.789,60.195)
O2: (15.500,94.653,62.560)
C6: (15.297,91.295,63.716)
C5: (15.300,90.608,62.564)
O3': (12.356,94.814,66.555)
N3: (15.420,92.685,61.426)
OP1: (12.101,88.563,64.890)
OP2: (10.687,90.643,65.467)
C2: (15.426,93.429,62.584)
C1': (15.331,93.391,65.071)
C3': (13.135,93.869,65.831)
O5': (13.152,90.589,65.967)
O4': (15.008,92.454,66.099)
C5': (12.926,91.589,67.012)
P: (11.976,90.050,65.022)
C4': (13.768,92.839,66.763)
C2': (14.334,94.554,65.189)
O2': (14.863,95.601,65.979)
N1: (15.350,92.680,63.770)
O4: (15.352,90.789,60.195)
O2: (15.500,94.653,62.560)
C6: (15.297,91.295,63.716)
C5: (15.300,90.608,62.564)
O3': (12.356,94.814,66.555)
Image (generated by PyMOL):