Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A1237:A1238
Extra
PDB:
ATOM 1 O3' C A1236 10.087 87.166 58.604 1.00 52.65 O
ATOM 2 P A A1237 10.111 87.130 60.203 1.00 53.32 P
ATOM 3 OP1 A A1237 11.300 86.352 60.612 1.00 52.53 O
ATOM 4 OP2 A A1237 8.763 86.721 60.669 1.00 54.09 O
ATOM 5 O5' A A1237 10.335 88.651 60.608 1.00 56.12 O
ATOM 6 C5' A A1237 11.599 89.304 60.387 1.00 60.07 C
ATOM 7 C4' A A1237 11.513 90.738 60.826 1.00 62.79 C
ATOM 8 O4' A A1237 10.605 91.445 59.949 1.00 63.95 O
ATOM 9 C3' A A1237 10.923 90.920 62.213 1.00 65.79 C
ATOM 10 O3' A A1237 11.924 90.767 63.208 1.00 70.34 O
ATOM 11 C2' A A1237 10.355 92.331 62.149 1.00 65.34 C
ATOM 12 O2' A A1237 11.317 93.338 62.367 1.00 66.65 O
ATOM 13 C1' A A1237 9.869 92.399 60.697 1.00 64.23 C
ATOM 14 N9 A A1237 8.443 92.108 60.551 1.00 62.97 N
ATOM 15 C8 A A1237 7.815 90.891 60.571 1.00 62.43 C
ATOM 16 N7 A A1237 6.512 90.969 60.471 1.00 62.65 N
ATOM 17 C5 A A1237 6.266 92.328 60.365 1.00 62.33 C
ATOM 18 C6 A A1237 5.076 93.067 60.247 1.00 62.42 C
ATOM 19 N6 A A1237 3.861 92.515 60.223 1.00 62.89 N
ATOM 20 N1 A A1237 5.177 94.409 60.158 1.00 62.61 N
ATOM 21 C2 A A1237 6.397 94.959 60.191 1.00 63.87 C
ATOM 22 N3 A A1237 7.588 94.371 60.306 1.00 63.89 N
ATOM 23 C4 A A1237 7.448 93.040 60.393 1.00 62.89 C
ATOM 24 P U A1238 11.546 90.186 64.664 1.00 75.75 P
ATOM 25 OP1 U A1238 11.637 88.695 64.595 1.00 73.62 O
ATOM 26 OP2 U A1238 10.288 90.825 65.136 1.00 74.32 O
ATOM 27 O5' U A1238 12.753 90.707 65.573 1.00 81.06 O
TER
ATOM 1 O3' A B1237 11.924 90.767 63.208 1.00 70.34 O
ATOM 2 P U B1238 11.546 90.186 64.664 1.00 75.75 P
ATOM 3 OP1 U B1238 11.637 88.695 64.595 1.00 73.62 O
ATOM 4 OP2 U B1238 10.288 90.825 65.136 1.00 74.32 O
ATOM 5 O5' U B1238 12.753 90.707 65.573 1.00 81.06 O
ATOM 6 C5' U B1238 12.568 91.728 66.601 1.00 88.74 C
ATOM 7 C4' U B1238 13.416 92.961 66.300 1.00 93.18 C
ATOM 8 O4' U B1238 14.636 92.546 65.620 1.00 95.29 O
ATOM 9 C3' U B1238 12.792 93.997 65.366 1.00 94.77 C
ATOM 10 O3' U B1238 11.990 94.939 66.086 1.00 94.06 O
ATOM 11 C2' U B1238 14.016 94.674 64.762 1.00 96.07 C
ATOM 12 O2' U B1238 14.598 95.630 65.632 1.00 96.81 O
ATOM 13 C1' U B1238 14.975 93.487 64.609 1.00 97.45 C
ATOM 14 N1 U B1238 14.967 92.799 63.298 1.00 99.85 N
ATOM 15 C2 U B1238 14.999 93.568 62.125 1.00101.25 C
ATOM 16 O2 U B1238 15.010 94.793 62.118 1.00102.59 O
ATOM 17 N3 U B1238 15.017 92.840 60.956 1.00101.50 N
ATOM 18 C4 U B1238 15.004 91.465 60.826 1.00101.12 C
ATOM 19 O4 U B1238 15.057 90.963 59.699 1.00100.67 O
ATOM 20 C5 U B1238 14.961 90.748 62.065 1.00100.80 C
ATOM 21 C6 U B1238 14.944 91.417 63.224 1.00100.26 C
ATOM 22 P A B1239 10.408 95.030 65.808 1.00 93.72 P
ATOM 23 OP1 A B1239 9.843 95.908 66.866 1.00 93.56 O
ATOM 24 OP2 A B1239 9.883 93.651 65.644 1.00 93.95 O
ATOM 25 O5' A B1239 10.278 95.782 64.408 1.00 90.37 O
TER
ATOM 2 P A A1237 10.111 87.130 60.203 1.00 53.32 P
ATOM 3 OP1 A A1237 11.300 86.352 60.612 1.00 52.53 O
ATOM 4 OP2 A A1237 8.763 86.721 60.669 1.00 54.09 O
ATOM 5 O5' A A1237 10.335 88.651 60.608 1.00 56.12 O
ATOM 6 C5' A A1237 11.599 89.304 60.387 1.00 60.07 C
ATOM 7 C4' A A1237 11.513 90.738 60.826 1.00 62.79 C
ATOM 8 O4' A A1237 10.605 91.445 59.949 1.00 63.95 O
ATOM 9 C3' A A1237 10.923 90.920 62.213 1.00 65.79 C
ATOM 10 O3' A A1237 11.924 90.767 63.208 1.00 70.34 O
ATOM 11 C2' A A1237 10.355 92.331 62.149 1.00 65.34 C
ATOM 12 O2' A A1237 11.317 93.338 62.367 1.00 66.65 O
ATOM 13 C1' A A1237 9.869 92.399 60.697 1.00 64.23 C
ATOM 14 N9 A A1237 8.443 92.108 60.551 1.00 62.97 N
ATOM 15 C8 A A1237 7.815 90.891 60.571 1.00 62.43 C
ATOM 16 N7 A A1237 6.512 90.969 60.471 1.00 62.65 N
ATOM 17 C5 A A1237 6.266 92.328 60.365 1.00 62.33 C
ATOM 18 C6 A A1237 5.076 93.067 60.247 1.00 62.42 C
ATOM 19 N6 A A1237 3.861 92.515 60.223 1.00 62.89 N
ATOM 20 N1 A A1237 5.177 94.409 60.158 1.00 62.61 N
ATOM 21 C2 A A1237 6.397 94.959 60.191 1.00 63.87 C
ATOM 22 N3 A A1237 7.588 94.371 60.306 1.00 63.89 N
ATOM 23 C4 A A1237 7.448 93.040 60.393 1.00 62.89 C
ATOM 24 P U A1238 11.546 90.186 64.664 1.00 75.75 P
ATOM 25 OP1 U A1238 11.637 88.695 64.595 1.00 73.62 O
ATOM 26 OP2 U A1238 10.288 90.825 65.136 1.00 74.32 O
ATOM 27 O5' U A1238 12.753 90.707 65.573 1.00 81.06 O
TER
ATOM 1 O3' A B1237 11.924 90.767 63.208 1.00 70.34 O
ATOM 2 P U B1238 11.546 90.186 64.664 1.00 75.75 P
ATOM 3 OP1 U B1238 11.637 88.695 64.595 1.00 73.62 O
ATOM 4 OP2 U B1238 10.288 90.825 65.136 1.00 74.32 O
ATOM 5 O5' U B1238 12.753 90.707 65.573 1.00 81.06 O
ATOM 6 C5' U B1238 12.568 91.728 66.601 1.00 88.74 C
ATOM 7 C4' U B1238 13.416 92.961 66.300 1.00 93.18 C
ATOM 8 O4' U B1238 14.636 92.546 65.620 1.00 95.29 O
ATOM 9 C3' U B1238 12.792 93.997 65.366 1.00 94.77 C
ATOM 10 O3' U B1238 11.990 94.939 66.086 1.00 94.06 O
ATOM 11 C2' U B1238 14.016 94.674 64.762 1.00 96.07 C
ATOM 12 O2' U B1238 14.598 95.630 65.632 1.00 96.81 O
ATOM 13 C1' U B1238 14.975 93.487 64.609 1.00 97.45 C
ATOM 14 N1 U B1238 14.967 92.799 63.298 1.00 99.85 N
ATOM 15 C2 U B1238 14.999 93.568 62.125 1.00101.25 C
ATOM 16 O2 U B1238 15.010 94.793 62.118 1.00102.59 O
ATOM 17 N3 U B1238 15.017 92.840 60.956 1.00101.50 N
ATOM 18 C4 U B1238 15.004 91.465 60.826 1.00101.12 C
ATOM 19 O4 U B1238 15.057 90.963 59.699 1.00100.67 O
ATOM 20 C5 U B1238 14.961 90.748 62.065 1.00100.80 C
ATOM 21 C6 U B1238 14.944 91.417 63.224 1.00100.26 C
ATOM 22 P A B1239 10.408 95.030 65.808 1.00 93.72 P
ATOM 23 OP1 A B1239 9.843 95.908 66.866 1.00 93.56 O
ATOM 24 OP2 A B1239 9.883 93.651 65.644 1.00 93.95 O
ATOM 25 O5' A B1239 10.278 95.782 64.408 1.00 90.37 O
TER
Atoms:
OP1: (11.300,86.352,60.612)
OP2: (8.763,86.721,60.669)
C3': (10.923,90.920,62.213)
C1': (9.869,92.399,60.697)
C5': (11.599,89.304,60.387)
O4': (10.605,91.445,59.949)
C8: (7.815,90.891,60.571)
O2': (11.317,93.338,62.367)
C6: (5.076,93.067,60.247)
C5: (6.266,92.328,60.365)
C4: (7.448,93.040,60.393)
P: (10.111,87.130,60.203)
C4': (11.513,90.738,60.826)
C2': (10.355,92.331,62.149)
C2: (6.397,94.959,60.191)
N1: (5.177,94.409,60.158)
N3: (7.588,94.371,60.306)
N6: (3.861,92.515,60.223)
N7: (6.512,90.969,60.471)
N9: (8.443,92.108,60.551)
O5': (10.335,88.651,60.608)
O3': (11.924,90.767,63.208)
OP2: (8.763,86.721,60.669)
C3': (10.923,90.920,62.213)
C1': (9.869,92.399,60.697)
C5': (11.599,89.304,60.387)
O4': (10.605,91.445,59.949)
C8: (7.815,90.891,60.571)
O2': (11.317,93.338,62.367)
C6: (5.076,93.067,60.247)
C5: (6.266,92.328,60.365)
C4: (7.448,93.040,60.393)
P: (10.111,87.130,60.203)
C4': (11.513,90.738,60.826)
C2': (10.355,92.331,62.149)
C2: (6.397,94.959,60.191)
N1: (5.177,94.409,60.158)
N3: (7.588,94.371,60.306)
N6: (3.861,92.515,60.223)
N7: (6.512,90.969,60.471)
N9: (8.443,92.108,60.551)
O5': (10.335,88.651,60.608)
O3': (11.924,90.767,63.208)
C4: (15.004,91.465,60.826)
N3: (15.017,92.840,60.956)
OP1: (11.637,88.695,64.595)
OP2: (10.288,90.825,65.136)
C2: (14.999,93.568,62.125)
C1': (14.975,93.487,64.609)
C3': (12.792,93.997,65.366)
O5': (12.753,90.707,65.573)
O4': (14.636,92.546,65.620)
C5': (12.568,91.728,66.601)
P: (11.546,90.186,64.664)
C4': (13.416,92.961,66.300)
C2': (14.016,94.674,64.762)
O2': (14.598,95.630,65.632)
N1: (14.967,92.799,63.298)
O4: (15.057,90.963,59.699)
O2: (15.010,94.793,62.118)
C6: (14.944,91.417,63.224)
C5: (14.961,90.748,62.065)
O3': (11.990,94.939,66.086)
N3: (15.017,92.840,60.956)
OP1: (11.637,88.695,64.595)
OP2: (10.288,90.825,65.136)
C2: (14.999,93.568,62.125)
C1': (14.975,93.487,64.609)
C3': (12.792,93.997,65.366)
O5': (12.753,90.707,65.573)
O4': (14.636,92.546,65.620)
C5': (12.568,91.728,66.601)
P: (11.546,90.186,64.664)
C4': (13.416,92.961,66.300)
C2': (14.016,94.674,64.762)
O2': (14.598,95.630,65.632)
N1: (14.967,92.799,63.298)
O4: (15.057,90.963,59.699)
O2: (15.010,94.793,62.118)
C6: (14.944,91.417,63.224)
C5: (14.961,90.748,62.065)
O3': (11.990,94.939,66.086)
Image (generated by PyMOL):