ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q81:A1237:A1238

Extra

PDB:
ATOM 1 O3' C A1236 10.436 86.927 58.770 1.00 78.02 O
ATOM 2 P A A1237 10.332 86.974 60.366 1.00 78.91 P
ATOM 3 OP1 A A1237 11.407 86.098 60.886 1.00 78.38 O
ATOM 4 OP2 A A1237 8.914 86.712 60.742 1.00 79.32 O
ATOM 5 O5' A A1237 10.676 88.485 60.741 1.00 81.67 O
ATOM 6 C5' A A1237 12.018 89.001 60.593 1.00 86.85 C
ATOM 7 C4' A A1237 12.052 90.462 60.966 1.00 89.60 C
ATOM 8 O4' A A1237 11.155 91.186 60.083 1.00 89.51 O
ATOM 9 C3' A A1237 11.539 90.774 62.363 1.00 91.85 C
ATOM 10 O3' A A1237 12.561 90.612 63.344 1.00 96.20 O
ATOM 11 C2' A A1237 11.059 92.216 62.223 1.00 91.15 C
ATOM 12 O2' A A1237 12.108 93.165 62.249 1.00 89.78 O
ATOM 13 C1' A A1237 10.472 92.193 60.812 1.00 90.78 C
ATOM 14 N9 A A1237 9.040 91.893 60.757 1.00 91.46 N
ATOM 15 C8 A A1237 8.430 90.659 60.720 1.00 91.45 C
ATOM 16 N7 A A1237 7.125 90.720 60.620 1.00 91.73 N
ATOM 17 C5 A A1237 6.854 92.082 60.599 1.00 92.18 C
ATOM 18 C6 A A1237 5.649 92.813 60.493 1.00 93.10 C
ATOM 19 N6 A A1237 4.447 92.249 60.359 1.00 93.79 N
ATOM 20 N1 A A1237 5.725 94.163 60.519 1.00 92.96 N
ATOM 21 C2 A A1237 6.934 94.733 60.627 1.00 92.53 C
ATOM 22 N3 A A1237 8.134 94.156 60.720 1.00 92.08 N
ATOM 23 C4 A A1237 8.023 92.815 60.700 1.00 91.69 C
ATOM 24 P U A1238 12.217 89.930 64.762 1.00100.22 P
ATOM 25 OP1 U A1238 12.416 88.460 64.594 1.00 98.55 O
ATOM 26 OP2 U A1238 10.903 90.445 65.248 1.00 99.48 O
ATOM 27 O5' U A1238 13.370 90.473 65.726 1.00104.27 O
TER

ATOM 1 O3' A B1237 12.561 90.612 63.344 1.00 96.20 O
ATOM 2 P U B1238 12.217 89.930 64.762 1.00100.22 P
ATOM 3 OP1 U B1238 12.416 88.460 64.594 1.00 98.55 O
ATOM 4 OP2 U B1238 10.903 90.445 65.248 1.00 99.48 O
ATOM 5 O5' U B1238 13.370 90.473 65.726 1.00104.27 O
ATOM 6 C5' U B1238 13.100 91.390 66.828 1.00111.13 C
ATOM 7 C4' U B1238 13.948 92.645 66.691 1.00116.07 C
ATOM 8 O4' U B1238 15.223 92.278 66.084 1.00118.72 O
ATOM 9 C3' U B1238 13.364 93.720 65.777 1.00118.38 C
ATOM 10 O3' U B1238 12.583 94.658 66.521 1.00118.02 O
ATOM 11 C2' U B1238 14.604 94.392 65.196 1.00120.01 C
ATOM 12 O2' U B1238 15.177 95.346 66.071 1.00120.61 O
ATOM 13 C1' U B1238 15.562 93.202 65.055 1.00121.10 C
ATOM 14 N1 U B1238 15.533 92.494 63.755 1.00123.45 N
ATOM 15 C2 U B1238 15.616 93.244 62.573 1.00124.33 C
ATOM 16 O2 U B1238 15.756 94.462 62.552 1.00124.45 O
ATOM 17 N3 U B1238 15.535 92.506 61.413 1.00125.06 N
ATOM 18 C4 U B1238 15.400 91.133 61.300 1.00125.28 C
ATOM 19 O4 U B1238 15.277 90.627 60.181 1.00125.43 O
ATOM 20 C5 U B1238 15.356 90.431 62.547 1.00125.00 C
ATOM 21 C6 U B1238 15.418 91.112 63.698 1.00124.24 C
ATOM 22 P A B1239 11.014 94.817 66.226 1.00118.32 P
ATOM 23 OP1 A B1239 10.493 95.734 67.276 1.00118.27 O
ATOM 24 OP2 A B1239 10.413 93.460 66.070 1.00118.57 O
ATOM 25 O5' A B1239 10.934 95.555 64.814 1.00116.12 O
TER

Atoms:
OP1: (11.407,86.098,60.886)
OP2: (8.914,86.712,60.742)
C3': (11.539,90.774,62.363)
C1': (10.472,92.193,60.812)
C5': (12.018,89.001,60.593)
O4': (11.155,91.186,60.083)
C8: (8.430,90.659,60.720)
O2': (12.108,93.165,62.249)
C6: (5.649,92.813,60.493)
C5: (6.854,92.082,60.599)
C4: (8.023,92.815,60.700)
P: (10.332,86.974,60.366)
C4': (12.052,90.462,60.966)
C2': (11.059,92.216,62.223)
C2: (6.934,94.733,60.627)
N1: (5.725,94.163,60.519)
N3: (8.134,94.156,60.720)
N6: (4.447,92.249,60.359)
N7: (7.125,90.720,60.620)
N9: (9.040,91.893,60.757)
O5': (10.676,88.485,60.741)
O3': (12.561,90.612,63.344)
C4: (15.400,91.133,61.300)
N3: (15.535,92.506,61.413)
OP1: (12.416,88.460,64.594)
OP2: (10.903,90.445,65.248)
C2: (15.616,93.244,62.573)
C1': (15.562,93.202,65.055)
C3': (13.364,93.720,65.777)
O5': (13.370,90.473,65.726)
O4': (15.223,92.278,66.084)
C5': (13.100,91.390,66.828)
P: (12.217,89.930,64.762)
C4': (13.948,92.645,66.691)
C2': (14.604,94.392,65.196)
O2': (15.177,95.346,66.071)
N1: (15.533,92.494,63.755)
O4: (15.277,90.627,60.181)
O2: (15.756,94.462,62.552)
C6: (15.418,91.112,63.698)
C5: (15.356,90.431,62.547)
O3': (12.583,94.658,66.521)
Image (generated by PyMOL):
PyMOL image
show in jmol