ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q82:A1237:A1238

Extra

PDB:
ATOM 1 O3' C A1236 10.498 87.914 59.160 1.00 60.28 O
ATOM 2 P A A1237 10.525 87.809 60.757 1.00 62.37 P
ATOM 3 OP1 A A1237 11.713 87.005 61.140 1.00 60.25 O
ATOM 4 OP2 A A1237 9.178 87.370 61.198 1.00 63.31 O
ATOM 5 O5' A A1237 10.729 89.318 61.222 1.00 64.24 O
ATOM 6 C5' A A1237 11.977 89.995 61.014 1.00 67.79 C
ATOM 7 C4' A A1237 11.852 91.432 61.438 1.00 70.43 C
ATOM 8 O4' A A1237 10.931 92.109 60.551 1.00 70.23 O
ATOM 9 C3' A A1237 11.244 91.638 62.812 1.00 73.20 C
ATOM 10 O3' A A1237 12.247 91.512 63.804 1.00 79.79 O
ATOM 11 C2' A A1237 10.716 93.062 62.714 1.00 71.70 C
ATOM 12 O2' A A1237 11.729 94.034 62.848 1.00 72.45 O
ATOM 13 C1' A A1237 10.212 93.086 61.274 1.00 70.00 C
ATOM 14 N9 A A1237 8.792 92.781 61.173 1.00 67.98 N
ATOM 15 C8 A A1237 8.152 91.570 61.231 1.00 66.65 C
ATOM 16 N7 A A1237 6.852 91.660 61.137 1.00 66.31 N
ATOM 17 C5 A A1237 6.623 93.022 61.000 1.00 66.87 C
ATOM 18 C6 A A1237 5.446 93.775 60.867 1.00 67.49 C
ATOM 19 N6 A A1237 4.228 93.242 60.856 1.00 68.58 N
ATOM 20 N1 A A1237 5.565 95.114 60.752 1.00 68.14 N
ATOM 21 C2 A A1237 6.791 95.651 60.774 1.00 68.18 C
ATOM 22 N3 A A1237 7.967 95.051 60.899 1.00 66.93 N
ATOM 23 C4 A A1237 7.810 93.720 61.010 1.00 67.10 C
ATOM 24 P U A1238 11.890 90.906 65.250 1.00 84.10 P
ATOM 25 OP1 U A1238 12.071 89.424 65.157 1.00 81.96 O
ATOM 26 OP2 U A1238 10.580 91.472 65.719 1.00 83.56 O
ATOM 27 O5' U A1238 13.065 91.496 66.160 1.00 87.76 O
TER

ATOM 1 O3' A B1237 12.247 91.512 63.804 1.00 79.79 O
ATOM 2 P U B1238 11.890 90.906 65.250 1.00 84.10 P
ATOM 3 OP1 U B1238 12.071 89.424 65.157 1.00 81.96 O
ATOM 4 OP2 U B1238 10.580 91.472 65.719 1.00 83.56 O
ATOM 5 O5' U B1238 13.065 91.496 66.160 1.00 87.76 O
ATOM 6 C5' U B1238 12.833 92.549 67.150 1.00 93.18 C
ATOM 7 C4' U B1238 13.714 93.768 66.871 1.00 96.02 C
ATOM 8 O4' U B1238 14.934 93.353 66.196 1.00 98.27 O
ATOM 9 C3' U B1238 13.107 94.836 65.969 1.00 96.34 C
ATOM 10 O3' U B1238 12.359 95.776 66.737 1.00 94.82 O
ATOM 11 C2' U B1238 14.326 95.493 65.335 1.00 98.07 C
ATOM 12 O2' U B1238 14.921 96.469 66.169 1.00 97.86 O
ATOM 13 C1' U B1238 15.276 94.297 65.187 1.00 99.95 C
ATOM 14 N1 U B1238 15.281 93.600 63.882 1.00102.11 N
ATOM 15 C2 U B1238 15.322 94.355 62.701 1.00103.09 C
ATOM 16 O2 U B1238 15.341 95.583 62.677 1.00102.72 O
ATOM 17 N3 U B1238 15.339 93.609 61.545 1.00103.82 N
ATOM 18 C4 U B1238 15.319 92.231 61.437 1.00103.73 C
ATOM 19 O4 U B1238 15.328 91.714 60.319 1.00103.83 O
ATOM 20 C5 U B1238 15.276 91.530 62.683 1.00103.07 C
ATOM 21 C6 U B1238 15.257 92.213 63.827 1.00102.30 C
ATOM 22 P A B1239 10.772 95.888 66.531 1.00 94.18 P
ATOM 23 OP1 A B1239 10.245 96.793 67.577 1.00 94.61 O
ATOM 24 OP2 A B1239 10.242 94.504 66.431 1.00 95.22 O
ATOM 25 O5' A B1239 10.604 96.587 65.108 1.00 91.95 O
TER

Atoms:
OP1: (11.713,87.005,61.140)
OP2: (9.178,87.370,61.198)
C3': (11.244,91.638,62.812)
C1': (10.212,93.086,61.274)
C5': (11.977,89.995,61.014)
O4': (10.931,92.109,60.551)
C8: (8.152,91.570,61.231)
O2': (11.729,94.034,62.848)
C6: (5.446,93.775,60.867)
C5: (6.623,93.022,61.000)
C4: (7.810,93.720,61.010)
P: (10.525,87.809,60.757)
C4': (11.852,91.432,61.438)
C2': (10.716,93.062,62.714)
C2: (6.791,95.651,60.774)
N1: (5.565,95.114,60.752)
N3: (7.967,95.051,60.899)
N6: (4.228,93.242,60.856)
N7: (6.852,91.660,61.137)
N9: (8.792,92.781,61.173)
O5': (10.729,89.318,61.222)
O3': (12.247,91.512,63.804)
C4: (15.319,92.231,61.437)
N3: (15.339,93.609,61.545)
OP1: (12.071,89.424,65.157)
OP2: (10.580,91.472,65.719)
C2: (15.322,94.355,62.701)
C1': (15.276,94.297,65.187)
C3': (13.107,94.836,65.969)
O5': (13.065,91.496,66.160)
O4': (14.934,93.353,66.196)
C5': (12.833,92.549,67.150)
P: (11.890,90.906,65.250)
C4': (13.714,93.768,66.871)
C2': (14.326,95.493,65.335)
O2': (14.921,96.469,66.169)
N1: (15.281,93.600,63.882)
O4: (15.328,91.714,60.319)
O2: (15.341,95.583,62.677)
C6: (15.257,92.213,63.827)
C5: (15.276,91.530,62.683)
O3': (12.359,95.776,66.737)
Image (generated by PyMOL):
PyMOL image
show in jmol