ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1QVG:01237:01238

Extra

PDB:
ATOM 1 O3' C A1236 10.683 87.490 58.748 1.00 68.13 O
ATOM 2 P A A1237 10.685 87.428 60.336 1.00 69.59 P
ATOM 3 OP1 A A1237 11.862 86.661 60.787 1.00 67.55 O
ATOM 4 OP2 A A1237 9.327 87.012 60.758 1.00 69.02 O
ATOM 5 O5' A A1237 10.881 88.947 60.742 1.00 73.40 O
ATOM 6 C5' A A1237 12.131 89.607 60.527 1.00 78.81 C
ATOM 7 C4' A A1237 12.018 91.044 60.936 1.00 82.67 C
ATOM 8 O4' A A1237 11.084 91.703 60.053 1.00 82.76 O
ATOM 9 C3' A A1237 11.441 91.268 62.322 1.00 85.36 C
ATOM 10 O3' A A1237 12.456 91.130 63.308 1.00 92.08 O
ATOM 11 C2' A A1237 10.883 92.683 62.216 1.00 84.09 C
ATOM 12 O2' A A1237 11.837 93.707 62.359 1.00 83.81 O
ATOM 13 C1' A A1237 10.372 92.690 60.774 1.00 83.64 C
ATOM 14 N9 A A1237 8.951 92.383 60.687 1.00 83.84 N
ATOM 15 C8 A A1237 8.320 91.164 60.719 1.00 82.83 C
ATOM 16 N7 A A1237 7.021 91.248 60.671 1.00 82.76 N
ATOM 17 C5 A A1237 6.778 92.614 60.587 1.00 84.51 C
ATOM 18 C6 A A1237 5.587 93.373 60.518 1.00 85.75 C
ATOM 19 N6 A A1237 4.360 92.841 60.529 1.00 86.76 N
ATOM 20 N1 A A1237 5.701 94.718 60.444 1.00 86.45 N
ATOM 21 C2 A A1237 6.927 95.254 60.443 1.00 86.07 C
ATOM 22 N3 A A1237 8.111 94.650 60.510 1.00 85.17 N
ATOM 23 C4 A A1237 7.960 93.318 60.581 1.00 84.25 C
ATOM 24 P U A1238 12.121 90.467 64.740 1.00 96.85 P
ATOM 25 OP1 U A1238 12.316 88.985 64.605 1.00 94.38 O
ATOM 26 OP2 U A1238 10.813 91.006 65.235 1.00 96.37 O
ATOM 27 O5' U A1238 13.284 91.057 65.675 1.00100.77 O
TER

ATOM 1 O3' A B1237 12.456 91.130 63.308 1.00 92.08 O
ATOM 2 P U B1238 12.121 90.467 64.740 1.00 96.85 P
ATOM 3 OP1 U B1238 12.316 88.985 64.605 1.00 94.38 O
ATOM 4 OP2 U B1238 10.813 91.006 65.235 1.00 96.37 O
ATOM 5 O5' U B1238 13.284 91.057 65.675 1.00100.77 O
ATOM 6 C5' U B1238 13.027 92.055 66.731 1.00106.33 C
ATOM 7 C4' U B1238 13.889 93.307 66.533 1.00109.57 C
ATOM 8 O4' U B1238 15.157 92.944 65.913 1.00111.59 O
ATOM 9 C3' U B1238 13.291 94.382 65.629 1.00110.47 C
ATOM 10 O3' U B1238 12.512 95.309 66.377 1.00108.48 O
ATOM 11 C2' U B1238 14.514 95.050 65.015 1.00112.24 C
ATOM 12 O2' U B1238 15.096 96.037 65.845 1.00112.71 O
ATOM 13 C1' U B1238 15.468 93.857 64.868 1.00113.84 C
ATOM 14 N1 U B1238 15.404 93.134 63.576 1.00116.10 N
ATOM 15 C2 U B1238 15.430 93.881 62.395 1.00117.70 C
ATOM 16 O2 U B1238 15.526 95.111 62.374 1.00118.96 O
ATOM 17 N3 U B1238 15.346 93.134 61.239 1.00118.34 N
ATOM 18 C4 U B1238 15.254 91.755 61.133 1.00117.81 C
ATOM 19 O4 U B1238 15.174 91.237 60.016 1.00117.75 O
ATOM 20 C5 U B1238 15.250 91.058 62.383 1.00117.05 C
ATOM 21 C6 U B1238 15.321 91.748 63.529 1.00116.30 C
ATOM 22 P A B1239 10.930 95.393 66.138 1.00107.69 P
ATOM 23 OP1 A B1239 10.369 96.307 67.157 1.00108.03 O
ATOM 24 OP2 A B1239 10.423 93.998 66.055 1.00108.18 O
ATOM 25 O5' A B1239 10.787 96.086 64.708 1.00105.50 O
TER

Atoms:
OP1: (11.862,86.661,60.787)
OP2: (9.327,87.012,60.758)
C3': (11.441,91.268,62.322)
C1': (10.372,92.690,60.774)
C5': (12.131,89.607,60.527)
O4': (11.084,91.703,60.053)
C8: (8.320,91.164,60.719)
O2': (11.837,93.707,62.359)
C6: (5.587,93.373,60.518)
C5: (6.778,92.614,60.587)
C4: (7.960,93.318,60.581)
P: (10.685,87.428,60.336)
C4': (12.018,91.044,60.936)
C2': (10.883,92.683,62.216)
C2: (6.927,95.254,60.443)
N1: (5.701,94.718,60.444)
N3: (8.111,94.650,60.510)
N6: (4.360,92.841,60.529)
N7: (7.021,91.248,60.671)
N9: (8.951,92.383,60.687)
O5': (10.881,88.947,60.742)
O3': (12.456,91.130,63.308)
C4: (15.254,91.755,61.133)
N3: (15.346,93.134,61.239)
OP1: (12.316,88.985,64.605)
OP2: (10.813,91.006,65.235)
C2: (15.430,93.881,62.395)
C1': (15.468,93.857,64.868)
C3': (13.291,94.382,65.629)
O5': (13.284,91.057,65.675)
O4': (15.157,92.944,65.913)
C5': (13.027,92.055,66.731)
P: (12.121,90.467,64.740)
C4': (13.889,93.307,66.533)
C2': (14.514,95.050,65.015)
O2': (15.096,96.037,65.845)
N1: (15.404,93.134,63.576)
O4: (15.174,91.237,60.016)
O2: (15.526,95.111,62.374)
C6: (15.321,91.748,63.529)
C5: (15.250,91.058,62.383)
O3': (12.512,95.309,66.377)
Image (generated by PyMOL):
PyMOL image
show in jmol