Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ4:01237:01238
Extra
PDB:
ATOM 1 O3' C A1236 10.390 87.488 58.887 1.00 64.58 O
ATOM 2 P A A1237 10.382 87.519 60.485 1.00 65.64 P
ATOM 3 OP1 A A1237 11.553 86.739 60.945 1.00 66.13 O
ATOM 4 OP2 A A1237 9.021 87.155 60.953 1.00 66.13 O
ATOM 5 O5' A A1237 10.617 89.052 60.832 1.00 69.48 O
ATOM 6 C5' A A1237 11.899 89.672 60.627 1.00 74.97 C
ATOM 7 C4' A A1237 11.838 91.117 61.041 1.00 78.44 C
ATOM 8 O4' A A1237 10.911 91.813 60.174 1.00 78.37 O
ATOM 9 C3' A A1237 11.293 91.347 62.440 1.00 81.71 C
ATOM 10 O3' A A1237 12.322 91.217 63.412 1.00 88.65 O
ATOM 11 C2' A A1237 10.746 92.763 62.352 1.00 80.79 C
ATOM 12 O2' A A1237 11.738 93.759 62.497 1.00 80.49 O
ATOM 13 C1' A A1237 10.201 92.783 60.921 1.00 79.78 C
ATOM 14 N9 A A1237 8.775 92.475 60.832 1.00 79.31 N
ATOM 15 C8 A A1237 8.163 91.245 60.853 1.00 78.40 C
ATOM 16 N7 A A1237 6.859 91.305 60.759 1.00 78.00 N
ATOM 17 C5 A A1237 6.592 92.663 60.670 1.00 79.05 C
ATOM 18 C6 A A1237 5.391 93.389 60.555 1.00 80.02 C
ATOM 19 N6 A A1237 4.182 92.823 60.513 1.00 79.99 N
ATOM 20 N1 A A1237 5.476 94.735 60.485 1.00 80.75 N
ATOM 21 C2 A A1237 6.687 95.304 60.535 1.00 80.75 C
ATOM 22 N3 A A1237 7.883 94.731 60.648 1.00 80.06 N
ATOM 23 C4 A A1237 7.763 93.394 60.710 1.00 79.28 C
ATOM 24 P U A1238 12.003 90.549 64.842 1.00 94.84 P
ATOM 25 OP1 U A1238 12.193 89.076 64.702 1.00 92.44 O
ATOM 26 OP2 U A1238 10.700 91.081 65.342 1.00 93.50 O
ATOM 27 O5' U A1238 13.185 91.107 65.764 1.00 98.55 O
TER
ATOM 1 O3' A B1237 12.322 91.217 63.412 1.00 88.65 O
ATOM 2 P U B1238 12.003 90.549 64.842 1.00 94.84 P
ATOM 3 OP1 U B1238 12.193 89.076 64.702 1.00 92.44 O
ATOM 4 OP2 U B1238 10.700 91.081 65.342 1.00 93.50 O
ATOM 5 O5' U B1238 13.185 91.107 65.764 1.00 98.55 O
ATOM 6 C5' U B1238 12.974 92.176 66.733 1.00103.94 C
ATOM 7 C4' U B1238 13.881 93.362 66.434 1.00107.13 C
ATOM 8 O4' U B1238 15.025 92.913 65.656 1.00108.66 O
ATOM 9 C3' U B1238 13.260 94.476 65.598 1.00107.95 C
ATOM 10 O3' U B1238 12.575 95.422 66.422 1.00106.46 O
ATOM 11 C2' U B1238 14.474 95.117 64.941 1.00109.61 C
ATOM 12 O2' U B1238 15.148 96.020 65.798 1.00110.52 O
ATOM 13 C1' U B1238 15.366 93.894 64.685 1.00110.90 C
ATOM 14 N1 U B1238 15.264 93.282 63.343 1.00112.84 N
ATOM 15 C2 U B1238 15.238 94.117 62.218 1.00113.95 C
ATOM 16 O2 U B1238 15.292 95.342 62.282 1.00114.64 O
ATOM 17 N3 U B1238 15.148 93.461 61.012 1.00113.80 N
ATOM 18 C4 U B1238 15.084 92.099 60.805 1.00113.58 C
ATOM 19 O4 U B1238 15.005 91.665 59.653 1.00113.11 O
ATOM 20 C5 U B1238 15.119 91.309 62.001 1.00113.54 C
ATOM 21 C6 U B1238 15.204 91.908 63.194 1.00112.79 C
ATOM 22 P A B1239 10.970 95.495 66.394 1.00105.57 P
ATOM 23 OP1 A B1239 10.545 96.502 67.397 1.00106.14 O
ATOM 24 OP2 A B1239 10.455 94.103 66.492 1.00105.63 O
ATOM 25 O5' A B1239 10.626 96.071 64.948 1.00103.27 O
TER
ATOM 2 P A A1237 10.382 87.519 60.485 1.00 65.64 P
ATOM 3 OP1 A A1237 11.553 86.739 60.945 1.00 66.13 O
ATOM 4 OP2 A A1237 9.021 87.155 60.953 1.00 66.13 O
ATOM 5 O5' A A1237 10.617 89.052 60.832 1.00 69.48 O
ATOM 6 C5' A A1237 11.899 89.672 60.627 1.00 74.97 C
ATOM 7 C4' A A1237 11.838 91.117 61.041 1.00 78.44 C
ATOM 8 O4' A A1237 10.911 91.813 60.174 1.00 78.37 O
ATOM 9 C3' A A1237 11.293 91.347 62.440 1.00 81.71 C
ATOM 10 O3' A A1237 12.322 91.217 63.412 1.00 88.65 O
ATOM 11 C2' A A1237 10.746 92.763 62.352 1.00 80.79 C
ATOM 12 O2' A A1237 11.738 93.759 62.497 1.00 80.49 O
ATOM 13 C1' A A1237 10.201 92.783 60.921 1.00 79.78 C
ATOM 14 N9 A A1237 8.775 92.475 60.832 1.00 79.31 N
ATOM 15 C8 A A1237 8.163 91.245 60.853 1.00 78.40 C
ATOM 16 N7 A A1237 6.859 91.305 60.759 1.00 78.00 N
ATOM 17 C5 A A1237 6.592 92.663 60.670 1.00 79.05 C
ATOM 18 C6 A A1237 5.391 93.389 60.555 1.00 80.02 C
ATOM 19 N6 A A1237 4.182 92.823 60.513 1.00 79.99 N
ATOM 20 N1 A A1237 5.476 94.735 60.485 1.00 80.75 N
ATOM 21 C2 A A1237 6.687 95.304 60.535 1.00 80.75 C
ATOM 22 N3 A A1237 7.883 94.731 60.648 1.00 80.06 N
ATOM 23 C4 A A1237 7.763 93.394 60.710 1.00 79.28 C
ATOM 24 P U A1238 12.003 90.549 64.842 1.00 94.84 P
ATOM 25 OP1 U A1238 12.193 89.076 64.702 1.00 92.44 O
ATOM 26 OP2 U A1238 10.700 91.081 65.342 1.00 93.50 O
ATOM 27 O5' U A1238 13.185 91.107 65.764 1.00 98.55 O
TER
ATOM 1 O3' A B1237 12.322 91.217 63.412 1.00 88.65 O
ATOM 2 P U B1238 12.003 90.549 64.842 1.00 94.84 P
ATOM 3 OP1 U B1238 12.193 89.076 64.702 1.00 92.44 O
ATOM 4 OP2 U B1238 10.700 91.081 65.342 1.00 93.50 O
ATOM 5 O5' U B1238 13.185 91.107 65.764 1.00 98.55 O
ATOM 6 C5' U B1238 12.974 92.176 66.733 1.00103.94 C
ATOM 7 C4' U B1238 13.881 93.362 66.434 1.00107.13 C
ATOM 8 O4' U B1238 15.025 92.913 65.656 1.00108.66 O
ATOM 9 C3' U B1238 13.260 94.476 65.598 1.00107.95 C
ATOM 10 O3' U B1238 12.575 95.422 66.422 1.00106.46 O
ATOM 11 C2' U B1238 14.474 95.117 64.941 1.00109.61 C
ATOM 12 O2' U B1238 15.148 96.020 65.798 1.00110.52 O
ATOM 13 C1' U B1238 15.366 93.894 64.685 1.00110.90 C
ATOM 14 N1 U B1238 15.264 93.282 63.343 1.00112.84 N
ATOM 15 C2 U B1238 15.238 94.117 62.218 1.00113.95 C
ATOM 16 O2 U B1238 15.292 95.342 62.282 1.00114.64 O
ATOM 17 N3 U B1238 15.148 93.461 61.012 1.00113.80 N
ATOM 18 C4 U B1238 15.084 92.099 60.805 1.00113.58 C
ATOM 19 O4 U B1238 15.005 91.665 59.653 1.00113.11 O
ATOM 20 C5 U B1238 15.119 91.309 62.001 1.00113.54 C
ATOM 21 C6 U B1238 15.204 91.908 63.194 1.00112.79 C
ATOM 22 P A B1239 10.970 95.495 66.394 1.00105.57 P
ATOM 23 OP1 A B1239 10.545 96.502 67.397 1.00106.14 O
ATOM 24 OP2 A B1239 10.455 94.103 66.492 1.00105.63 O
ATOM 25 O5' A B1239 10.626 96.071 64.948 1.00103.27 O
TER
Atoms:
OP1: (11.553,86.739,60.945)
OP2: (9.021,87.155,60.953)
C3': (11.293,91.347,62.440)
C1': (10.201,92.783,60.921)
C5': (11.899,89.672,60.627)
O4': (10.911,91.813,60.174)
C8: (8.163,91.245,60.853)
O2': (11.738,93.759,62.497)
C6: (5.391,93.389,60.555)
C5: (6.592,92.663,60.670)
C4: (7.763,93.394,60.710)
P: (10.382,87.519,60.485)
C4': (11.838,91.117,61.041)
C2': (10.746,92.763,62.352)
C2: (6.687,95.304,60.535)
N1: (5.476,94.735,60.485)
N3: (7.883,94.731,60.648)
N6: (4.182,92.823,60.513)
N7: (6.859,91.305,60.759)
N9: (8.775,92.475,60.832)
O5': (10.617,89.052,60.832)
O3': (12.322,91.217,63.412)
OP2: (9.021,87.155,60.953)
C3': (11.293,91.347,62.440)
C1': (10.201,92.783,60.921)
C5': (11.899,89.672,60.627)
O4': (10.911,91.813,60.174)
C8: (8.163,91.245,60.853)
O2': (11.738,93.759,62.497)
C6: (5.391,93.389,60.555)
C5: (6.592,92.663,60.670)
C4: (7.763,93.394,60.710)
P: (10.382,87.519,60.485)
C4': (11.838,91.117,61.041)
C2': (10.746,92.763,62.352)
C2: (6.687,95.304,60.535)
N1: (5.476,94.735,60.485)
N3: (7.883,94.731,60.648)
N6: (4.182,92.823,60.513)
N7: (6.859,91.305,60.759)
N9: (8.775,92.475,60.832)
O5': (10.617,89.052,60.832)
O3': (12.322,91.217,63.412)
C4: (15.084,92.099,60.805)
N3: (15.148,93.461,61.012)
OP1: (12.193,89.076,64.702)
OP2: (10.700,91.081,65.342)
C2: (15.238,94.117,62.218)
C1': (15.366,93.894,64.685)
C3': (13.260,94.476,65.598)
O5': (13.185,91.107,65.764)
O4': (15.025,92.913,65.656)
C5': (12.974,92.176,66.733)
P: (12.003,90.549,64.842)
C4': (13.881,93.362,66.434)
C2': (14.474,95.117,64.941)
O2': (15.148,96.020,65.798)
N1: (15.264,93.282,63.343)
O4: (15.005,91.665,59.653)
O2: (15.292,95.342,62.282)
C6: (15.204,91.908,63.194)
C5: (15.119,91.309,62.001)
O3': (12.575,95.422,66.422)
N3: (15.148,93.461,61.012)
OP1: (12.193,89.076,64.702)
OP2: (10.700,91.081,65.342)
C2: (15.238,94.117,62.218)
C1': (15.366,93.894,64.685)
C3': (13.260,94.476,65.598)
O5': (13.185,91.107,65.764)
O4': (15.025,92.913,65.656)
C5': (12.974,92.176,66.733)
P: (12.003,90.549,64.842)
C4': (13.881,93.362,66.434)
C2': (14.474,95.117,64.941)
O2': (15.148,96.020,65.798)
N1: (15.264,93.282,63.343)
O4: (15.005,91.665,59.653)
O2: (15.292,95.342,62.282)
C6: (15.204,91.908,63.194)
C5: (15.119,91.309,62.001)
O3': (12.575,95.422,66.422)
Image (generated by PyMOL):