Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:01237:01238
Extra
PDB:
ATOM 1 O3' C A1236 9.872 87.365 58.580 1.00 70.81 O
ATOM 2 P A A1237 9.880 87.322 60.183 1.00 71.56 P
ATOM 3 OP1 A A1237 11.067 86.522 60.570 1.00 70.01 O
ATOM 4 OP2 A A1237 8.534 86.916 60.659 1.00 71.75 O
ATOM 5 O5' A A1237 10.094 88.843 60.602 1.00 73.75 O
ATOM 6 C5' A A1237 11.358 89.505 60.397 1.00 77.89 C
ATOM 7 C4' A A1237 11.259 90.945 60.832 1.00 81.00 C
ATOM 8 O4' A A1237 10.328 91.640 59.967 1.00 81.74 O
ATOM 9 C3' A A1237 10.705 91.154 62.232 1.00 84.04 C
ATOM 10 O3' A A1237 11.737 91.030 63.202 1.00 89.52 O
ATOM 11 C2' A A1237 10.134 92.566 62.156 1.00 83.13 C
ATOM 12 O2' A A1237 11.097 93.586 62.324 1.00 82.53 O
ATOM 13 C1' A A1237 9.606 92.600 60.719 1.00 82.48 C
ATOM 14 N9 A A1237 8.185 92.283 60.612 1.00 82.49 N
ATOM 15 C8 A A1237 7.592 91.045 60.628 1.00 82.33 C
ATOM 16 N7 A A1237 6.288 91.085 60.520 1.00 82.43 N
ATOM 17 C5 A A1237 6.001 92.439 60.426 1.00 82.58 C
ATOM 18 C6 A A1237 4.792 93.143 60.303 1.00 82.98 C
ATOM 19 N6 A A1237 3.595 92.555 60.256 1.00 82.93 N
ATOM 20 N1 A A1237 4.853 94.490 60.232 1.00 83.57 N
ATOM 21 C2 A A1237 6.055 95.078 60.290 1.00 83.63 C
ATOM 22 N3 A A1237 7.260 94.526 60.413 1.00 82.51 N
ATOM 23 C4 A A1237 7.161 93.188 60.476 1.00 82.52 C
ATOM 24 P U A1238 11.425 90.373 64.638 1.00 94.06 P
ATOM 25 OP1 U A1238 11.513 88.894 64.482 1.00 92.11 O
ATOM 26 OP2 U A1238 10.177 90.983 65.178 1.00 93.33 O
ATOM 27 O5' U A1238 12.670 90.844 65.524 1.00 98.69 O
TER
ATOM 1 O3' A B1237 11.737 91.030 63.202 1.00 89.52 O
ATOM 2 P U B1238 11.425 90.373 64.638 1.00 94.06 P
ATOM 3 OP1 U B1238 11.513 88.894 64.482 1.00 92.11 O
ATOM 4 OP2 U B1238 10.177 90.983 65.178 1.00 93.33 O
ATOM 5 O5' U B1238 12.670 90.844 65.524 1.00 98.69 O
ATOM 6 C5' U B1238 12.557 91.898 66.527 1.00104.85 C
ATOM 7 C4' U B1238 13.443 93.084 66.168 1.00108.38 C
ATOM 8 O4' U B1238 14.614 92.604 65.449 1.00110.02 O
ATOM 9 C3' U B1238 12.818 94.125 65.245 1.00110.01 C
ATOM 10 O3' U B1238 12.116 95.125 65.996 1.00110.45 O
ATOM 11 C2' U B1238 14.035 94.735 64.560 1.00111.26 C
ATOM 12 O2' U B1238 14.686 95.707 65.356 1.00112.01 O
ATOM 13 C1' U B1238 14.952 93.514 64.411 1.00112.37 C
ATOM 14 N1 U B1238 14.862 92.808 63.116 1.00114.41 N
ATOM 15 C2 U B1238 14.955 93.554 61.935 1.00115.61 C
ATOM 16 O2 U B1238 15.118 94.770 61.916 1.00116.03 O
ATOM 17 N3 U B1238 14.846 92.820 60.777 1.00115.92 N
ATOM 18 C4 U B1238 14.664 91.454 60.665 1.00115.99 C
ATOM 19 O4 U B1238 14.579 90.943 59.546 1.00115.44 O
ATOM 20 C5 U B1238 14.594 90.757 61.915 1.00115.62 C
ATOM 21 C6 U B1238 14.692 91.436 63.065 1.00114.76 C
ATOM 22 P A B1239 10.508 95.206 65.940 1.00110.67 P
ATOM 23 OP1 A B1239 10.082 96.154 67.002 1.00110.73 O
ATOM 24 OP2 A B1239 9.970 93.818 65.942 1.00111.17 O
ATOM 25 O5' A B1239 10.180 95.873 64.530 1.00107.64 O
TER
ATOM 2 P A A1237 9.880 87.322 60.183 1.00 71.56 P
ATOM 3 OP1 A A1237 11.067 86.522 60.570 1.00 70.01 O
ATOM 4 OP2 A A1237 8.534 86.916 60.659 1.00 71.75 O
ATOM 5 O5' A A1237 10.094 88.843 60.602 1.00 73.75 O
ATOM 6 C5' A A1237 11.358 89.505 60.397 1.00 77.89 C
ATOM 7 C4' A A1237 11.259 90.945 60.832 1.00 81.00 C
ATOM 8 O4' A A1237 10.328 91.640 59.967 1.00 81.74 O
ATOM 9 C3' A A1237 10.705 91.154 62.232 1.00 84.04 C
ATOM 10 O3' A A1237 11.737 91.030 63.202 1.00 89.52 O
ATOM 11 C2' A A1237 10.134 92.566 62.156 1.00 83.13 C
ATOM 12 O2' A A1237 11.097 93.586 62.324 1.00 82.53 O
ATOM 13 C1' A A1237 9.606 92.600 60.719 1.00 82.48 C
ATOM 14 N9 A A1237 8.185 92.283 60.612 1.00 82.49 N
ATOM 15 C8 A A1237 7.592 91.045 60.628 1.00 82.33 C
ATOM 16 N7 A A1237 6.288 91.085 60.520 1.00 82.43 N
ATOM 17 C5 A A1237 6.001 92.439 60.426 1.00 82.58 C
ATOM 18 C6 A A1237 4.792 93.143 60.303 1.00 82.98 C
ATOM 19 N6 A A1237 3.595 92.555 60.256 1.00 82.93 N
ATOM 20 N1 A A1237 4.853 94.490 60.232 1.00 83.57 N
ATOM 21 C2 A A1237 6.055 95.078 60.290 1.00 83.63 C
ATOM 22 N3 A A1237 7.260 94.526 60.413 1.00 82.51 N
ATOM 23 C4 A A1237 7.161 93.188 60.476 1.00 82.52 C
ATOM 24 P U A1238 11.425 90.373 64.638 1.00 94.06 P
ATOM 25 OP1 U A1238 11.513 88.894 64.482 1.00 92.11 O
ATOM 26 OP2 U A1238 10.177 90.983 65.178 1.00 93.33 O
ATOM 27 O5' U A1238 12.670 90.844 65.524 1.00 98.69 O
TER
ATOM 1 O3' A B1237 11.737 91.030 63.202 1.00 89.52 O
ATOM 2 P U B1238 11.425 90.373 64.638 1.00 94.06 P
ATOM 3 OP1 U B1238 11.513 88.894 64.482 1.00 92.11 O
ATOM 4 OP2 U B1238 10.177 90.983 65.178 1.00 93.33 O
ATOM 5 O5' U B1238 12.670 90.844 65.524 1.00 98.69 O
ATOM 6 C5' U B1238 12.557 91.898 66.527 1.00104.85 C
ATOM 7 C4' U B1238 13.443 93.084 66.168 1.00108.38 C
ATOM 8 O4' U B1238 14.614 92.604 65.449 1.00110.02 O
ATOM 9 C3' U B1238 12.818 94.125 65.245 1.00110.01 C
ATOM 10 O3' U B1238 12.116 95.125 65.996 1.00110.45 O
ATOM 11 C2' U B1238 14.035 94.735 64.560 1.00111.26 C
ATOM 12 O2' U B1238 14.686 95.707 65.356 1.00112.01 O
ATOM 13 C1' U B1238 14.952 93.514 64.411 1.00112.37 C
ATOM 14 N1 U B1238 14.862 92.808 63.116 1.00114.41 N
ATOM 15 C2 U B1238 14.955 93.554 61.935 1.00115.61 C
ATOM 16 O2 U B1238 15.118 94.770 61.916 1.00116.03 O
ATOM 17 N3 U B1238 14.846 92.820 60.777 1.00115.92 N
ATOM 18 C4 U B1238 14.664 91.454 60.665 1.00115.99 C
ATOM 19 O4 U B1238 14.579 90.943 59.546 1.00115.44 O
ATOM 20 C5 U B1238 14.594 90.757 61.915 1.00115.62 C
ATOM 21 C6 U B1238 14.692 91.436 63.065 1.00114.76 C
ATOM 22 P A B1239 10.508 95.206 65.940 1.00110.67 P
ATOM 23 OP1 A B1239 10.082 96.154 67.002 1.00110.73 O
ATOM 24 OP2 A B1239 9.970 93.818 65.942 1.00111.17 O
ATOM 25 O5' A B1239 10.180 95.873 64.530 1.00107.64 O
TER
Atoms:
OP1: (11.067,86.522,60.570)
OP2: (8.534,86.916,60.659)
C3': (10.705,91.154,62.232)
C1': (9.606,92.600,60.719)
C5': (11.358,89.505,60.397)
O4': (10.328,91.640,59.967)
C8: (7.592,91.045,60.628)
O2': (11.097,93.586,62.324)
C6: (4.792,93.143,60.303)
C5: (6.001,92.439,60.426)
C4: (7.161,93.188,60.476)
P: (9.880,87.322,60.183)
C4': (11.259,90.945,60.832)
C2': (10.134,92.566,62.156)
C2: (6.055,95.078,60.290)
N1: (4.853,94.490,60.232)
N3: (7.260,94.526,60.413)
N6: (3.595,92.555,60.256)
N7: (6.288,91.085,60.520)
N9: (8.185,92.283,60.612)
O5': (10.094,88.843,60.602)
O3': (11.737,91.030,63.202)
OP2: (8.534,86.916,60.659)
C3': (10.705,91.154,62.232)
C1': (9.606,92.600,60.719)
C5': (11.358,89.505,60.397)
O4': (10.328,91.640,59.967)
C8: (7.592,91.045,60.628)
O2': (11.097,93.586,62.324)
C6: (4.792,93.143,60.303)
C5: (6.001,92.439,60.426)
C4: (7.161,93.188,60.476)
P: (9.880,87.322,60.183)
C4': (11.259,90.945,60.832)
C2': (10.134,92.566,62.156)
C2: (6.055,95.078,60.290)
N1: (4.853,94.490,60.232)
N3: (7.260,94.526,60.413)
N6: (3.595,92.555,60.256)
N7: (6.288,91.085,60.520)
N9: (8.185,92.283,60.612)
O5': (10.094,88.843,60.602)
O3': (11.737,91.030,63.202)
C4: (14.664,91.454,60.665)
N3: (14.846,92.820,60.777)
OP1: (11.513,88.894,64.482)
OP2: (10.177,90.983,65.178)
C2: (14.955,93.554,61.935)
C1': (14.952,93.514,64.411)
C3': (12.818,94.125,65.245)
O5': (12.670,90.844,65.524)
O4': (14.614,92.604,65.449)
C5': (12.557,91.898,66.527)
P: (11.425,90.373,64.638)
C4': (13.443,93.084,66.168)
C2': (14.035,94.735,64.560)
O2': (14.686,95.707,65.356)
N1: (14.862,92.808,63.116)
O4: (14.579,90.943,59.546)
O2: (15.118,94.770,61.916)
C6: (14.692,91.436,63.065)
C5: (14.594,90.757,61.915)
O3': (12.116,95.125,65.996)
N3: (14.846,92.820,60.777)
OP1: (11.513,88.894,64.482)
OP2: (10.177,90.983,65.178)
C2: (14.955,93.554,61.935)
C1': (14.952,93.514,64.411)
C3': (12.818,94.125,65.245)
O5': (12.670,90.844,65.524)
O4': (14.614,92.604,65.449)
C5': (12.557,91.898,66.527)
P: (11.425,90.373,64.638)
C4': (13.443,93.084,66.168)
C2': (14.035,94.735,64.560)
O2': (14.686,95.707,65.356)
N1: (14.862,92.808,63.116)
O4: (14.579,90.943,59.546)
O2: (15.118,94.770,61.916)
C6: (14.692,91.436,63.065)
C5: (14.594,90.757,61.915)
O3': (12.116,95.125,65.996)
Image (generated by PyMOL):