Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:01237:01238
Extra
PDB:
ATOM 1 O3' C A1236 10.000 87.215 58.358 1.00 72.43 O
ATOM 2 P A A1237 10.012 87.180 59.959 1.00 72.65 P
ATOM 3 OP1 A A1237 11.199 86.388 60.352 1.00 71.46 O
ATOM 4 OP2 A A1237 8.666 86.780 60.439 1.00 73.67 O
ATOM 5 O5' A A1237 10.230 88.701 60.375 1.00 76.49 O
ATOM 6 C5' A A1237 11.507 89.345 60.211 1.00 80.55 C
ATOM 7 C4' A A1237 11.403 90.795 60.600 1.00 83.54 C
ATOM 8 O4' A A1237 10.477 91.456 59.705 1.00 83.83 O
ATOM 9 C3' A A1237 10.827 91.045 61.983 1.00 86.89 C
ATOM 10 O3' A A1237 11.836 90.943 62.976 1.00 93.01 O
ATOM 11 C2' A A1237 10.265 92.456 61.860 1.00 85.84 C
ATOM 12 O2' A A1237 11.230 93.476 62.018 1.00 85.19 O
ATOM 13 C1' A A1237 9.758 92.449 60.416 1.00 85.51 C
ATOM 14 N9 A A1237 8.334 92.146 60.312 1.00 85.80 N
ATOM 15 C8 A A1237 7.719 90.919 60.332 1.00 85.58 C
ATOM 16 N7 A A1237 6.415 90.983 60.237 1.00 85.54 N
ATOM 17 C5 A A1237 6.153 92.343 60.147 1.00 85.98 C
ATOM 18 C6 A A1237 4.956 93.072 60.036 1.00 86.06 C
ATOM 19 N6 A A1237 3.747 92.511 60.011 1.00 86.04 N
ATOM 20 N1 A A1237 5.044 94.417 59.959 1.00 86.96 N
ATOM 21 C2 A A1237 6.258 94.981 60.001 1.00 87.08 C
ATOM 22 N3 A A1237 7.452 94.405 60.114 1.00 86.20 N
ATOM 23 C4 A A1237 7.328 93.069 60.183 1.00 85.93 C
ATOM 24 P U A1238 11.481 90.350 64.428 1.00 97.93 P
ATOM 25 OP1 U A1238 11.545 88.865 64.329 1.00 96.28 O
ATOM 26 OP2 U A1238 10.233 91.003 64.919 1.00 97.56 O
ATOM 27 O5' U A1238 12.714 90.834 65.322 1.00103.52 O
TER
ATOM 1 O3' A B1237 11.836 90.943 62.976 1.00 93.01 O
ATOM 2 P U B1238 11.481 90.350 64.428 1.00 97.93 P
ATOM 3 OP1 U B1238 11.545 88.865 64.329 1.00 96.28 O
ATOM 4 OP2 U B1238 10.233 91.003 64.919 1.00 97.56 O
ATOM 5 O5' U B1238 12.714 90.834 65.322 1.00103.52 O
ATOM 6 C5' U B1238 12.586 91.897 66.312 1.00110.55 C
ATOM 7 C4' U B1238 13.462 93.084 65.939 1.00114.63 C
ATOM 8 O4' U B1238 14.654 92.595 65.261 1.00116.55 O
ATOM 9 C3' U B1238 12.837 94.082 64.968 1.00116.20 C
ATOM 10 O3' U B1238 12.113 95.096 65.674 1.00115.66 O
ATOM 11 C2' U B1238 14.053 94.670 64.262 1.00117.73 C
ATOM 12 O2' U B1238 14.696 95.682 65.015 1.00118.48 O
ATOM 13 C1' U B1238 14.978 93.449 64.172 1.00118.76 C
ATOM 14 N1 U B1238 14.902 92.663 62.922 1.00120.59 N
ATOM 15 C2 U B1238 14.896 93.340 61.696 1.00121.69 C
ATOM 16 O2 U B1238 14.945 94.560 61.598 1.00122.12 O
ATOM 17 N3 U B1238 14.827 92.527 60.589 1.00122.13 N
ATOM 18 C4 U B1238 14.762 91.146 60.567 1.00122.45 C
ATOM 19 O4 U B1238 14.699 90.560 59.483 1.00122.42 O
ATOM 20 C5 U B1238 14.776 90.525 61.858 1.00121.91 C
ATOM 21 C6 U B1238 14.844 91.280 62.960 1.00120.97 C
ATOM 22 P A B1239 10.515 95.205 65.521 1.00115.35 P
ATOM 23 OP1 A B1239 10.039 96.165 66.549 1.00115.57 O
ATOM 24 OP2 A B1239 9.957 93.827 65.493 1.00116.58 O
ATOM 25 O5' A B1239 10.289 95.866 64.089 1.00113.12 O
TER
ATOM 2 P A A1237 10.012 87.180 59.959 1.00 72.65 P
ATOM 3 OP1 A A1237 11.199 86.388 60.352 1.00 71.46 O
ATOM 4 OP2 A A1237 8.666 86.780 60.439 1.00 73.67 O
ATOM 5 O5' A A1237 10.230 88.701 60.375 1.00 76.49 O
ATOM 6 C5' A A1237 11.507 89.345 60.211 1.00 80.55 C
ATOM 7 C4' A A1237 11.403 90.795 60.600 1.00 83.54 C
ATOM 8 O4' A A1237 10.477 91.456 59.705 1.00 83.83 O
ATOM 9 C3' A A1237 10.827 91.045 61.983 1.00 86.89 C
ATOM 10 O3' A A1237 11.836 90.943 62.976 1.00 93.01 O
ATOM 11 C2' A A1237 10.265 92.456 61.860 1.00 85.84 C
ATOM 12 O2' A A1237 11.230 93.476 62.018 1.00 85.19 O
ATOM 13 C1' A A1237 9.758 92.449 60.416 1.00 85.51 C
ATOM 14 N9 A A1237 8.334 92.146 60.312 1.00 85.80 N
ATOM 15 C8 A A1237 7.719 90.919 60.332 1.00 85.58 C
ATOM 16 N7 A A1237 6.415 90.983 60.237 1.00 85.54 N
ATOM 17 C5 A A1237 6.153 92.343 60.147 1.00 85.98 C
ATOM 18 C6 A A1237 4.956 93.072 60.036 1.00 86.06 C
ATOM 19 N6 A A1237 3.747 92.511 60.011 1.00 86.04 N
ATOM 20 N1 A A1237 5.044 94.417 59.959 1.00 86.96 N
ATOM 21 C2 A A1237 6.258 94.981 60.001 1.00 87.08 C
ATOM 22 N3 A A1237 7.452 94.405 60.114 1.00 86.20 N
ATOM 23 C4 A A1237 7.328 93.069 60.183 1.00 85.93 C
ATOM 24 P U A1238 11.481 90.350 64.428 1.00 97.93 P
ATOM 25 OP1 U A1238 11.545 88.865 64.329 1.00 96.28 O
ATOM 26 OP2 U A1238 10.233 91.003 64.919 1.00 97.56 O
ATOM 27 O5' U A1238 12.714 90.834 65.322 1.00103.52 O
TER
ATOM 1 O3' A B1237 11.836 90.943 62.976 1.00 93.01 O
ATOM 2 P U B1238 11.481 90.350 64.428 1.00 97.93 P
ATOM 3 OP1 U B1238 11.545 88.865 64.329 1.00 96.28 O
ATOM 4 OP2 U B1238 10.233 91.003 64.919 1.00 97.56 O
ATOM 5 O5' U B1238 12.714 90.834 65.322 1.00103.52 O
ATOM 6 C5' U B1238 12.586 91.897 66.312 1.00110.55 C
ATOM 7 C4' U B1238 13.462 93.084 65.939 1.00114.63 C
ATOM 8 O4' U B1238 14.654 92.595 65.261 1.00116.55 O
ATOM 9 C3' U B1238 12.837 94.082 64.968 1.00116.20 C
ATOM 10 O3' U B1238 12.113 95.096 65.674 1.00115.66 O
ATOM 11 C2' U B1238 14.053 94.670 64.262 1.00117.73 C
ATOM 12 O2' U B1238 14.696 95.682 65.015 1.00118.48 O
ATOM 13 C1' U B1238 14.978 93.449 64.172 1.00118.76 C
ATOM 14 N1 U B1238 14.902 92.663 62.922 1.00120.59 N
ATOM 15 C2 U B1238 14.896 93.340 61.696 1.00121.69 C
ATOM 16 O2 U B1238 14.945 94.560 61.598 1.00122.12 O
ATOM 17 N3 U B1238 14.827 92.527 60.589 1.00122.13 N
ATOM 18 C4 U B1238 14.762 91.146 60.567 1.00122.45 C
ATOM 19 O4 U B1238 14.699 90.560 59.483 1.00122.42 O
ATOM 20 C5 U B1238 14.776 90.525 61.858 1.00121.91 C
ATOM 21 C6 U B1238 14.844 91.280 62.960 1.00120.97 C
ATOM 22 P A B1239 10.515 95.205 65.521 1.00115.35 P
ATOM 23 OP1 A B1239 10.039 96.165 66.549 1.00115.57 O
ATOM 24 OP2 A B1239 9.957 93.827 65.493 1.00116.58 O
ATOM 25 O5' A B1239 10.289 95.866 64.089 1.00113.12 O
TER
Atoms:
OP1: (11.199,86.388,60.352)
OP2: (8.666,86.780,60.439)
C3': (10.827,91.045,61.983)
C1': (9.758,92.449,60.416)
C5': (11.507,89.345,60.211)
O4': (10.477,91.456,59.705)
C8: (7.719,90.919,60.332)
O2': (11.230,93.476,62.018)
C6: (4.956,93.072,60.036)
C5: (6.153,92.343,60.147)
C4: (7.328,93.069,60.183)
P: (10.012,87.180,59.959)
C4': (11.403,90.795,60.600)
C2': (10.265,92.456,61.860)
C2: (6.258,94.981,60.001)
N1: (5.044,94.417,59.959)
N3: (7.452,94.405,60.114)
N6: (3.747,92.511,60.011)
N7: (6.415,90.983,60.237)
N9: (8.334,92.146,60.312)
O5': (10.230,88.701,60.375)
O3': (11.836,90.943,62.976)
OP2: (8.666,86.780,60.439)
C3': (10.827,91.045,61.983)
C1': (9.758,92.449,60.416)
C5': (11.507,89.345,60.211)
O4': (10.477,91.456,59.705)
C8: (7.719,90.919,60.332)
O2': (11.230,93.476,62.018)
C6: (4.956,93.072,60.036)
C5: (6.153,92.343,60.147)
C4: (7.328,93.069,60.183)
P: (10.012,87.180,59.959)
C4': (11.403,90.795,60.600)
C2': (10.265,92.456,61.860)
C2: (6.258,94.981,60.001)
N1: (5.044,94.417,59.959)
N3: (7.452,94.405,60.114)
N6: (3.747,92.511,60.011)
N7: (6.415,90.983,60.237)
N9: (8.334,92.146,60.312)
O5': (10.230,88.701,60.375)
O3': (11.836,90.943,62.976)
C4: (14.762,91.146,60.567)
N3: (14.827,92.527,60.589)
OP1: (11.545,88.865,64.329)
OP2: (10.233,91.003,64.919)
C2: (14.896,93.340,61.696)
C1': (14.978,93.449,64.172)
C3': (12.837,94.082,64.968)
O5': (12.714,90.834,65.322)
O4': (14.654,92.595,65.261)
C5': (12.586,91.897,66.312)
P: (11.481,90.350,64.428)
C4': (13.462,93.084,65.939)
C2': (14.053,94.670,64.262)
O2': (14.696,95.682,65.015)
N1: (14.902,92.663,62.922)
O4: (14.699,90.560,59.483)
O2: (14.945,94.560,61.598)
C6: (14.844,91.280,62.960)
C5: (14.776,90.525,61.858)
O3': (12.113,95.096,65.674)
N3: (14.827,92.527,60.589)
OP1: (11.545,88.865,64.329)
OP2: (10.233,91.003,64.919)
C2: (14.896,93.340,61.696)
C1': (14.978,93.449,64.172)
C3': (12.837,94.082,64.968)
O5': (12.714,90.834,65.322)
O4': (14.654,92.595,65.261)
C5': (12.586,91.897,66.312)
P: (11.481,90.350,64.428)
C4': (13.462,93.084,65.939)
C2': (14.053,94.670,64.262)
O2': (14.696,95.682,65.015)
N1: (14.902,92.663,62.922)
O4: (14.699,90.560,59.483)
O2: (14.945,94.560,61.598)
C6: (14.844,91.280,62.960)
C5: (14.776,90.525,61.858)
O3': (12.113,95.096,65.674)
Image (generated by PyMOL):