Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:01237:01238
Extra
PDB:
ATOM 1 O3' C A1236 9.931 86.689 58.331 1.00 54.06 O
ATOM 2 P A A1237 9.972 86.657 59.932 1.00 54.28 P
ATOM 3 OP1 A A1237 11.177 85.879 60.330 1.00 51.90 O
ATOM 4 OP2 A A1237 8.631 86.250 60.433 1.00 54.28 O
ATOM 5 O5' A A1237 10.185 88.184 60.327 1.00 55.90 O
ATOM 6 C5' A A1237 11.462 88.829 60.153 1.00 59.05 C
ATOM 7 C4' A A1237 11.377 90.263 60.604 1.00 60.59 C
ATOM 8 O4' A A1237 10.462 90.975 59.734 1.00 60.70 O
ATOM 9 C3' A A1237 10.818 90.457 62.003 1.00 62.51 C
ATOM 10 O3' A A1237 11.861 90.326 62.970 1.00 67.48 O
ATOM 11 C2' A A1237 10.236 91.865 61.934 1.00 61.49 C
ATOM 12 O2' A A1237 11.212 92.873 62.097 1.00 63.07 O
ATOM 13 C1' A A1237 9.718 91.913 60.491 1.00 60.12 C
ATOM 14 N9 A A1237 8.306 91.579 60.346 1.00 59.45 N
ATOM 15 C8 A A1237 7.729 90.334 60.409 1.00 59.06 C
ATOM 16 N7 A A1237 6.431 90.345 60.247 1.00 58.99 N
ATOM 17 C5 A A1237 6.129 91.686 60.067 1.00 59.41 C
ATOM 18 C6 A A1237 4.916 92.360 59.861 1.00 60.56 C
ATOM 19 N6 A A1237 3.727 91.746 59.812 1.00 60.82 N
ATOM 20 N1 A A1237 4.961 93.705 59.710 1.00 60.98 N
ATOM 21 C2 A A1237 6.151 94.317 59.777 1.00 60.25 C
ATOM 22 N3 A A1237 7.359 93.791 59.977 1.00 60.35 N
ATOM 23 C4 A A1237 7.277 92.457 60.116 1.00 59.50 C
ATOM 24 P U A1238 11.542 89.734 64.436 1.00 72.12 P
ATOM 25 OP1 U A1238 11.671 88.249 64.363 1.00 69.98 O
ATOM 26 OP2 U A1238 10.276 90.343 64.934 1.00 70.84 O
ATOM 27 O5' U A1238 12.756 90.272 65.323 1.00 76.74 O
TER
ATOM 1 O3' A B1237 11.861 90.326 62.970 1.00 67.48 O
ATOM 2 P U B1238 11.542 89.734 64.436 1.00 72.12 P
ATOM 3 OP1 U B1238 11.671 88.249 64.363 1.00 69.98 O
ATOM 4 OP2 U B1238 10.276 90.343 64.934 1.00 70.84 O
ATOM 5 O5' U B1238 12.756 90.272 65.323 1.00 76.74 O
ATOM 6 C5' U B1238 12.616 91.415 66.224 1.00 83.45 C
ATOM 7 C4' U B1238 13.481 92.576 65.753 1.00 86.63 C
ATOM 8 O4' U B1238 14.667 92.035 65.105 1.00 88.36 O
ATOM 9 C3' U B1238 12.828 93.495 64.722 1.00 87.98 C
ATOM 10 O3' U B1238 12.176 94.605 65.368 1.00 88.11 O
ATOM 11 C2' U B1238 14.014 93.972 63.884 1.00 89.26 C
ATOM 12 O2' U B1238 14.707 95.061 64.464 1.00 90.46 O
ATOM 13 C1' U B1238 14.933 92.744 63.905 1.00 90.26 C
ATOM 14 N1 U B1238 14.857 91.796 62.771 1.00 92.45 N
ATOM 15 C2 U B1238 14.742 92.296 61.463 1.00 93.46 C
ATOM 16 O2 U B1238 14.658 93.491 61.198 1.00 93.76 O
ATOM 17 N3 U B1238 14.726 91.334 60.476 1.00 93.87 N
ATOM 18 C4 U B1238 14.812 89.958 60.641 1.00 93.74 C
ATOM 19 O4 U B1238 14.805 89.223 59.646 1.00 92.90 O
ATOM 20 C5 U B1238 14.903 89.523 62.004 1.00 92.77 C
ATOM 21 C6 U B1238 14.922 90.427 62.994 1.00 92.43 C
ATOM 22 P A B1239 10.562 94.690 65.425 1.00 88.72 P
ATOM 23 OP1 A B1239 10.212 95.734 66.425 1.00 88.49 O
ATOM 24 OP2 A B1239 10.012 93.310 65.584 1.00 88.86 O
ATOM 25 O5' A B1239 10.132 95.254 63.998 1.00 85.67 O
TER
ATOM 2 P A A1237 9.972 86.657 59.932 1.00 54.28 P
ATOM 3 OP1 A A1237 11.177 85.879 60.330 1.00 51.90 O
ATOM 4 OP2 A A1237 8.631 86.250 60.433 1.00 54.28 O
ATOM 5 O5' A A1237 10.185 88.184 60.327 1.00 55.90 O
ATOM 6 C5' A A1237 11.462 88.829 60.153 1.00 59.05 C
ATOM 7 C4' A A1237 11.377 90.263 60.604 1.00 60.59 C
ATOM 8 O4' A A1237 10.462 90.975 59.734 1.00 60.70 O
ATOM 9 C3' A A1237 10.818 90.457 62.003 1.00 62.51 C
ATOM 10 O3' A A1237 11.861 90.326 62.970 1.00 67.48 O
ATOM 11 C2' A A1237 10.236 91.865 61.934 1.00 61.49 C
ATOM 12 O2' A A1237 11.212 92.873 62.097 1.00 63.07 O
ATOM 13 C1' A A1237 9.718 91.913 60.491 1.00 60.12 C
ATOM 14 N9 A A1237 8.306 91.579 60.346 1.00 59.45 N
ATOM 15 C8 A A1237 7.729 90.334 60.409 1.00 59.06 C
ATOM 16 N7 A A1237 6.431 90.345 60.247 1.00 58.99 N
ATOM 17 C5 A A1237 6.129 91.686 60.067 1.00 59.41 C
ATOM 18 C6 A A1237 4.916 92.360 59.861 1.00 60.56 C
ATOM 19 N6 A A1237 3.727 91.746 59.812 1.00 60.82 N
ATOM 20 N1 A A1237 4.961 93.705 59.710 1.00 60.98 N
ATOM 21 C2 A A1237 6.151 94.317 59.777 1.00 60.25 C
ATOM 22 N3 A A1237 7.359 93.791 59.977 1.00 60.35 N
ATOM 23 C4 A A1237 7.277 92.457 60.116 1.00 59.50 C
ATOM 24 P U A1238 11.542 89.734 64.436 1.00 72.12 P
ATOM 25 OP1 U A1238 11.671 88.249 64.363 1.00 69.98 O
ATOM 26 OP2 U A1238 10.276 90.343 64.934 1.00 70.84 O
ATOM 27 O5' U A1238 12.756 90.272 65.323 1.00 76.74 O
TER
ATOM 1 O3' A B1237 11.861 90.326 62.970 1.00 67.48 O
ATOM 2 P U B1238 11.542 89.734 64.436 1.00 72.12 P
ATOM 3 OP1 U B1238 11.671 88.249 64.363 1.00 69.98 O
ATOM 4 OP2 U B1238 10.276 90.343 64.934 1.00 70.84 O
ATOM 5 O5' U B1238 12.756 90.272 65.323 1.00 76.74 O
ATOM 6 C5' U B1238 12.616 91.415 66.224 1.00 83.45 C
ATOM 7 C4' U B1238 13.481 92.576 65.753 1.00 86.63 C
ATOM 8 O4' U B1238 14.667 92.035 65.105 1.00 88.36 O
ATOM 9 C3' U B1238 12.828 93.495 64.722 1.00 87.98 C
ATOM 10 O3' U B1238 12.176 94.605 65.368 1.00 88.11 O
ATOM 11 C2' U B1238 14.014 93.972 63.884 1.00 89.26 C
ATOM 12 O2' U B1238 14.707 95.061 64.464 1.00 90.46 O
ATOM 13 C1' U B1238 14.933 92.744 63.905 1.00 90.26 C
ATOM 14 N1 U B1238 14.857 91.796 62.771 1.00 92.45 N
ATOM 15 C2 U B1238 14.742 92.296 61.463 1.00 93.46 C
ATOM 16 O2 U B1238 14.658 93.491 61.198 1.00 93.76 O
ATOM 17 N3 U B1238 14.726 91.334 60.476 1.00 93.87 N
ATOM 18 C4 U B1238 14.812 89.958 60.641 1.00 93.74 C
ATOM 19 O4 U B1238 14.805 89.223 59.646 1.00 92.90 O
ATOM 20 C5 U B1238 14.903 89.523 62.004 1.00 92.77 C
ATOM 21 C6 U B1238 14.922 90.427 62.994 1.00 92.43 C
ATOM 22 P A B1239 10.562 94.690 65.425 1.00 88.72 P
ATOM 23 OP1 A B1239 10.212 95.734 66.425 1.00 88.49 O
ATOM 24 OP2 A B1239 10.012 93.310 65.584 1.00 88.86 O
ATOM 25 O5' A B1239 10.132 95.254 63.998 1.00 85.67 O
TER
Atoms:
OP1: (11.177,85.879,60.330)
OP2: (8.631,86.250,60.433)
C3': (10.818,90.457,62.003)
C1': (9.718,91.913,60.491)
C5': (11.462,88.829,60.153)
O4': (10.462,90.975,59.734)
C8: (7.729,90.334,60.409)
O2': (11.212,92.873,62.097)
C6: (4.916,92.360,59.861)
C5: (6.129,91.686,60.067)
C4: (7.277,92.457,60.116)
P: (9.972,86.657,59.932)
C4': (11.377,90.263,60.604)
C2': (10.236,91.865,61.934)
C2: (6.151,94.317,59.777)
N1: (4.961,93.705,59.710)
N3: (7.359,93.791,59.977)
N6: (3.727,91.746,59.812)
N7: (6.431,90.345,60.247)
N9: (8.306,91.579,60.346)
O5': (10.185,88.184,60.327)
O3': (11.861,90.326,62.970)
OP2: (8.631,86.250,60.433)
C3': (10.818,90.457,62.003)
C1': (9.718,91.913,60.491)
C5': (11.462,88.829,60.153)
O4': (10.462,90.975,59.734)
C8: (7.729,90.334,60.409)
O2': (11.212,92.873,62.097)
C6: (4.916,92.360,59.861)
C5: (6.129,91.686,60.067)
C4: (7.277,92.457,60.116)
P: (9.972,86.657,59.932)
C4': (11.377,90.263,60.604)
C2': (10.236,91.865,61.934)
C2: (6.151,94.317,59.777)
N1: (4.961,93.705,59.710)
N3: (7.359,93.791,59.977)
N6: (3.727,91.746,59.812)
N7: (6.431,90.345,60.247)
N9: (8.306,91.579,60.346)
O5': (10.185,88.184,60.327)
O3': (11.861,90.326,62.970)
C4: (14.812,89.958,60.641)
N3: (14.726,91.334,60.476)
OP1: (11.671,88.249,64.363)
OP2: (10.276,90.343,64.934)
C2: (14.742,92.296,61.463)
C1': (14.933,92.744,63.905)
C3': (12.828,93.495,64.722)
O5': (12.756,90.272,65.323)
O4': (14.667,92.035,65.105)
C5': (12.616,91.415,66.224)
P: (11.542,89.734,64.436)
C4': (13.481,92.576,65.753)
C2': (14.014,93.972,63.884)
O2': (14.707,95.061,64.464)
N1: (14.857,91.796,62.771)
O4: (14.805,89.223,59.646)
O2: (14.658,93.491,61.198)
C6: (14.922,90.427,62.994)
C5: (14.903,89.523,62.004)
O3': (12.176,94.605,65.368)
N3: (14.726,91.334,60.476)
OP1: (11.671,88.249,64.363)
OP2: (10.276,90.343,64.934)
C2: (14.742,92.296,61.463)
C1': (14.933,92.744,63.905)
C3': (12.828,93.495,64.722)
O5': (12.756,90.272,65.323)
O4': (14.667,92.035,65.105)
C5': (12.616,91.415,66.224)
P: (11.542,89.734,64.436)
C4': (13.481,92.576,65.753)
C2': (14.014,93.972,63.884)
O2': (14.707,95.061,64.464)
N1: (14.857,91.796,62.771)
O4: (14.805,89.223,59.646)
O2: (14.658,93.491,61.198)
C6: (14.922,90.427,62.994)
C5: (14.903,89.523,62.004)
O3': (12.176,94.605,65.368)
Image (generated by PyMOL):