Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:01237:01238
Extra
PDB:
ATOM 1 O3' C A1236 10.019 86.591 58.412 1.00 62.72 O
ATOM 2 P A A1237 10.031 86.557 60.014 1.00 64.28 P
ATOM 3 OP1 A A1237 11.213 85.768 60.427 1.00 62.76 O
ATOM 4 OP2 A A1237 8.680 86.160 60.491 1.00 65.36 O
ATOM 5 O5' A A1237 10.256 88.077 60.422 1.00 67.07 O
ATOM 6 C5' A A1237 11.536 88.712 60.257 1.00 71.66 C
ATOM 7 C4' A A1237 11.445 90.162 60.657 1.00 73.95 C
ATOM 8 O4' A A1237 10.537 90.845 59.760 1.00 73.99 O
ATOM 9 C3' A A1237 10.870 90.400 62.043 1.00 76.62 C
ATOM 10 O3' A A1237 11.887 90.293 63.029 1.00 82.27 O
ATOM 11 C2' A A1237 10.299 91.808 61.929 1.00 75.47 C
ATOM 12 O2' A A1237 11.268 92.825 62.091 1.00 75.86 O
ATOM 13 C1' A A1237 9.792 91.811 60.482 1.00 74.33 C
ATOM 14 N9 A A1237 8.379 91.471 60.354 1.00 73.14 N
ATOM 15 C8 A A1237 7.805 90.228 60.430 1.00 73.17 C
ATOM 16 N7 A A1237 6.506 90.236 60.278 1.00 73.32 N
ATOM 17 C5 A A1237 6.202 91.574 60.088 1.00 73.54 C
ATOM 18 C6 A A1237 4.990 92.241 59.877 1.00 75.24 C
ATOM 19 N6 A A1237 3.805 91.624 59.827 1.00 76.01 N
ATOM 20 N1 A A1237 5.032 93.583 59.719 1.00 75.88 N
ATOM 21 C2 A A1237 6.219 94.198 59.782 1.00 74.41 C
ATOM 22 N3 A A1237 7.426 93.678 59.983 1.00 73.70 N
ATOM 23 C4 A A1237 7.346 92.346 60.129 1.00 73.35 C
ATOM 24 P U A1238 11.542 89.692 64.480 1.00 87.20 P
ATOM 25 OP1 U A1238 11.586 88.210 64.367 1.00 85.86 O
ATOM 26 OP2 U A1238 10.307 90.356 64.979 1.00 86.60 O
ATOM 27 O5' U A1238 12.787 90.150 65.368 1.00 91.36 O
TER
ATOM 1 O3' A B1237 11.887 90.293 63.029 1.00 82.27 O
ATOM 2 P U B1238 11.542 89.692 64.480 1.00 87.20 P
ATOM 3 OP1 U B1238 11.586 88.210 64.367 1.00 85.86 O
ATOM 4 OP2 U B1238 10.307 90.356 64.979 1.00 86.60 O
ATOM 5 O5' U B1238 12.787 90.150 65.368 1.00 91.36 O
ATOM 6 C5' U B1238 12.692 91.240 66.328 1.00 97.52 C
ATOM 7 C4' U B1238 13.515 92.432 65.867 1.00100.77 C
ATOM 8 O4' U B1238 14.681 91.942 65.148 1.00102.61 O
ATOM 9 C3' U B1238 12.821 93.377 64.892 1.00102.20 C
ATOM 10 O3' U B1238 12.104 94.400 65.597 1.00102.27 O
ATOM 11 C2' U B1238 13.991 93.973 64.116 1.00103.51 C
ATOM 12 O2' U B1238 14.635 95.025 64.808 1.00104.48 O
ATOM 13 C1' U B1238 14.952 92.781 64.035 1.00104.53 C
ATOM 14 N1 U B1238 14.888 91.968 62.802 1.00106.61 N
ATOM 15 C2 U B1238 14.929 92.620 61.563 1.00107.47 C
ATOM 16 O2 U B1238 14.998 93.837 61.443 1.00107.72 O
ATOM 17 N3 U B1238 14.888 91.787 60.469 1.00107.81 N
ATOM 18 C4 U B1238 14.813 90.405 60.471 1.00108.17 C
ATOM 19 O4 U B1238 14.793 89.796 59.396 1.00107.39 O
ATOM 20 C5 U B1238 14.767 89.811 61.776 1.00107.30 C
ATOM 21 C6 U B1238 14.803 90.588 62.865 1.00106.63 C
ATOM 22 P A B1239 10.496 94.481 65.507 1.00102.36 P
ATOM 23 OP1 A B1239 10.050 95.459 66.534 1.00102.17 O
ATOM 24 OP2 A B1239 9.954 93.094 65.535 1.00102.58 O
ATOM 25 O5' A B1239 10.199 95.113 64.073 1.00 99.88 O
TER
ATOM 2 P A A1237 10.031 86.557 60.014 1.00 64.28 P
ATOM 3 OP1 A A1237 11.213 85.768 60.427 1.00 62.76 O
ATOM 4 OP2 A A1237 8.680 86.160 60.491 1.00 65.36 O
ATOM 5 O5' A A1237 10.256 88.077 60.422 1.00 67.07 O
ATOM 6 C5' A A1237 11.536 88.712 60.257 1.00 71.66 C
ATOM 7 C4' A A1237 11.445 90.162 60.657 1.00 73.95 C
ATOM 8 O4' A A1237 10.537 90.845 59.760 1.00 73.99 O
ATOM 9 C3' A A1237 10.870 90.400 62.043 1.00 76.62 C
ATOM 10 O3' A A1237 11.887 90.293 63.029 1.00 82.27 O
ATOM 11 C2' A A1237 10.299 91.808 61.929 1.00 75.47 C
ATOM 12 O2' A A1237 11.268 92.825 62.091 1.00 75.86 O
ATOM 13 C1' A A1237 9.792 91.811 60.482 1.00 74.33 C
ATOM 14 N9 A A1237 8.379 91.471 60.354 1.00 73.14 N
ATOM 15 C8 A A1237 7.805 90.228 60.430 1.00 73.17 C
ATOM 16 N7 A A1237 6.506 90.236 60.278 1.00 73.32 N
ATOM 17 C5 A A1237 6.202 91.574 60.088 1.00 73.54 C
ATOM 18 C6 A A1237 4.990 92.241 59.877 1.00 75.24 C
ATOM 19 N6 A A1237 3.805 91.624 59.827 1.00 76.01 N
ATOM 20 N1 A A1237 5.032 93.583 59.719 1.00 75.88 N
ATOM 21 C2 A A1237 6.219 94.198 59.782 1.00 74.41 C
ATOM 22 N3 A A1237 7.426 93.678 59.983 1.00 73.70 N
ATOM 23 C4 A A1237 7.346 92.346 60.129 1.00 73.35 C
ATOM 24 P U A1238 11.542 89.692 64.480 1.00 87.20 P
ATOM 25 OP1 U A1238 11.586 88.210 64.367 1.00 85.86 O
ATOM 26 OP2 U A1238 10.307 90.356 64.979 1.00 86.60 O
ATOM 27 O5' U A1238 12.787 90.150 65.368 1.00 91.36 O
TER
ATOM 1 O3' A B1237 11.887 90.293 63.029 1.00 82.27 O
ATOM 2 P U B1238 11.542 89.692 64.480 1.00 87.20 P
ATOM 3 OP1 U B1238 11.586 88.210 64.367 1.00 85.86 O
ATOM 4 OP2 U B1238 10.307 90.356 64.979 1.00 86.60 O
ATOM 5 O5' U B1238 12.787 90.150 65.368 1.00 91.36 O
ATOM 6 C5' U B1238 12.692 91.240 66.328 1.00 97.52 C
ATOM 7 C4' U B1238 13.515 92.432 65.867 1.00100.77 C
ATOM 8 O4' U B1238 14.681 91.942 65.148 1.00102.61 O
ATOM 9 C3' U B1238 12.821 93.377 64.892 1.00102.20 C
ATOM 10 O3' U B1238 12.104 94.400 65.597 1.00102.27 O
ATOM 11 C2' U B1238 13.991 93.973 64.116 1.00103.51 C
ATOM 12 O2' U B1238 14.635 95.025 64.808 1.00104.48 O
ATOM 13 C1' U B1238 14.952 92.781 64.035 1.00104.53 C
ATOM 14 N1 U B1238 14.888 91.968 62.802 1.00106.61 N
ATOM 15 C2 U B1238 14.929 92.620 61.563 1.00107.47 C
ATOM 16 O2 U B1238 14.998 93.837 61.443 1.00107.72 O
ATOM 17 N3 U B1238 14.888 91.787 60.469 1.00107.81 N
ATOM 18 C4 U B1238 14.813 90.405 60.471 1.00108.17 C
ATOM 19 O4 U B1238 14.793 89.796 59.396 1.00107.39 O
ATOM 20 C5 U B1238 14.767 89.811 61.776 1.00107.30 C
ATOM 21 C6 U B1238 14.803 90.588 62.865 1.00106.63 C
ATOM 22 P A B1239 10.496 94.481 65.507 1.00102.36 P
ATOM 23 OP1 A B1239 10.050 95.459 66.534 1.00102.17 O
ATOM 24 OP2 A B1239 9.954 93.094 65.535 1.00102.58 O
ATOM 25 O5' A B1239 10.199 95.113 64.073 1.00 99.88 O
TER
Atoms:
OP1: (11.213,85.768,60.427)
OP2: (8.680,86.160,60.491)
C3': (10.870,90.400,62.043)
C1': (9.792,91.811,60.482)
C5': (11.536,88.712,60.257)
O4': (10.537,90.845,59.760)
C8: (7.805,90.228,60.430)
O2': (11.268,92.825,62.091)
C6: (4.990,92.241,59.877)
C5: (6.202,91.574,60.088)
C4: (7.346,92.346,60.129)
P: (10.031,86.557,60.014)
C4': (11.445,90.162,60.657)
C2': (10.299,91.808,61.929)
C2: (6.219,94.198,59.782)
N1: (5.032,93.583,59.719)
N3: (7.426,93.678,59.983)
N6: (3.805,91.624,59.827)
N7: (6.506,90.236,60.278)
N9: (8.379,91.471,60.354)
O5': (10.256,88.077,60.422)
O3': (11.887,90.293,63.029)
OP2: (8.680,86.160,60.491)
C3': (10.870,90.400,62.043)
C1': (9.792,91.811,60.482)
C5': (11.536,88.712,60.257)
O4': (10.537,90.845,59.760)
C8: (7.805,90.228,60.430)
O2': (11.268,92.825,62.091)
C6: (4.990,92.241,59.877)
C5: (6.202,91.574,60.088)
C4: (7.346,92.346,60.129)
P: (10.031,86.557,60.014)
C4': (11.445,90.162,60.657)
C2': (10.299,91.808,61.929)
C2: (6.219,94.198,59.782)
N1: (5.032,93.583,59.719)
N3: (7.426,93.678,59.983)
N6: (3.805,91.624,59.827)
N7: (6.506,90.236,60.278)
N9: (8.379,91.471,60.354)
O5': (10.256,88.077,60.422)
O3': (11.887,90.293,63.029)
C4: (14.813,90.405,60.471)
N3: (14.888,91.787,60.469)
OP1: (11.586,88.210,64.367)
OP2: (10.307,90.356,64.979)
C2: (14.929,92.620,61.563)
C1': (14.952,92.781,64.035)
C3': (12.821,93.377,64.892)
O5': (12.787,90.150,65.368)
O4': (14.681,91.942,65.148)
C5': (12.692,91.240,66.328)
P: (11.542,89.692,64.480)
C4': (13.515,92.432,65.867)
C2': (13.991,93.973,64.116)
O2': (14.635,95.025,64.808)
N1: (14.888,91.968,62.802)
O4: (14.793,89.796,59.396)
O2: (14.998,93.837,61.443)
C6: (14.803,90.588,62.865)
C5: (14.767,89.811,61.776)
O3': (12.104,94.400,65.597)
N3: (14.888,91.787,60.469)
OP1: (11.586,88.210,64.367)
OP2: (10.307,90.356,64.979)
C2: (14.929,92.620,61.563)
C1': (14.952,92.781,64.035)
C3': (12.821,93.377,64.892)
O5': (12.787,90.150,65.368)
O4': (14.681,91.942,65.148)
C5': (12.692,91.240,66.328)
P: (11.542,89.692,64.480)
C4': (13.515,92.432,65.867)
C2': (13.991,93.973,64.116)
O2': (14.635,95.025,64.808)
N1: (14.888,91.968,62.802)
O4: (14.793,89.796,59.396)
O2: (14.998,93.837,61.443)
C6: (14.803,90.588,62.865)
C5: (14.767,89.811,61.776)
O3': (12.104,94.400,65.597)
Image (generated by PyMOL):