Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:01237:01238
Extra
PDB:
ATOM 1 O3' C A1236 9.981 86.618 58.384 1.00 66.23 O
ATOM 2 P A A1237 9.974 86.484 59.983 1.00 67.38 P
ATOM 3 OP1 A A1237 11.145 85.659 60.359 1.00 65.28 O
ATOM 4 OP2 A A1237 8.618 86.084 60.434 1.00 68.38 O
ATOM 5 O5' A A1237 10.214 87.972 60.487 1.00 70.17 O
ATOM 6 C5' A A1237 11.464 88.640 60.257 1.00 75.03 C
ATOM 7 C4' A A1237 11.348 90.093 60.637 1.00 77.32 C
ATOM 8 O4' A A1237 10.409 90.746 59.748 1.00 77.15 O
ATOM 9 C3' A A1237 10.792 90.345 62.027 1.00 80.32 C
ATOM 10 O3' A A1237 11.822 90.251 63.000 1.00 86.13 O
ATOM 11 C2' A A1237 10.226 91.754 61.902 1.00 79.58 C
ATOM 12 O2' A A1237 11.211 92.761 62.030 1.00 80.88 O
ATOM 13 C1' A A1237 9.694 91.739 60.464 1.00 77.92 C
ATOM 14 N9 A A1237 8.269 91.439 60.359 1.00 76.34 N
ATOM 15 C8 A A1237 7.653 90.215 60.434 1.00 76.35 C
ATOM 16 N7 A A1237 6.352 90.270 60.307 1.00 75.84 N
ATOM 17 C5 A A1237 6.091 91.620 60.137 1.00 76.48 C
ATOM 18 C6 A A1237 4.896 92.336 59.959 1.00 77.70 C
ATOM 19 N6 A A1237 3.687 91.766 59.929 1.00 77.84 N
ATOM 20 N1 A A1237 4.984 93.677 59.816 1.00 78.40 N
ATOM 21 C2 A A1237 6.195 94.247 59.860 1.00 77.30 C
ATOM 22 N3 A A1237 7.387 93.682 60.030 1.00 77.00 N
ATOM 23 C4 A A1237 7.264 92.352 60.163 1.00 76.39 C
ATOM 24 P U A1238 11.513 89.611 64.443 1.00 90.86 P
ATOM 25 OP1 U A1238 11.554 88.133 64.298 1.00 89.36 O
ATOM 26 OP2 U A1238 10.295 90.260 64.996 1.00 90.41 O
ATOM 27 O5' U A1238 12.780 90.049 65.309 1.00 95.32 O
TER
ATOM 1 O3' A B1237 11.822 90.251 63.000 1.00 86.13 O
ATOM 2 P U B1238 11.513 89.611 64.443 1.00 90.86 P
ATOM 3 OP1 U B1238 11.554 88.133 64.298 1.00 89.36 O
ATOM 4 OP2 U B1238 10.295 90.260 64.996 1.00 90.41 O
ATOM 5 O5' U B1238 12.780 90.049 65.309 1.00 95.32 O
ATOM 6 C5' U B1238 12.712 91.131 66.280 1.00101.40 C
ATOM 7 C4' U B1238 13.579 92.301 65.842 1.00104.66 C
ATOM 8 O4' U B1238 14.732 91.787 65.119 1.00106.57 O
ATOM 9 C3' U B1238 12.932 93.292 64.880 1.00106.19 C
ATOM 10 O3' U B1238 12.212 94.312 65.589 1.00106.12 O
ATOM 11 C2' U B1238 14.142 93.884 64.163 1.00107.65 C
ATOM 12 O2' U B1238 14.808 94.875 64.921 1.00108.58 O
ATOM 13 C1' U B1238 15.064 92.664 64.051 1.00108.74 C
ATOM 14 N1 U B1238 14.984 91.919 62.777 1.00111.06 N
ATOM 15 C2 U B1238 15.121 92.629 61.578 1.00112.23 C
ATOM 16 O2 U B1238 15.298 93.840 61.527 1.00112.61 O
ATOM 17 N3 U B1238 15.042 91.862 60.439 1.00112.65 N
ATOM 18 C4 U B1238 14.851 90.494 60.363 1.00112.90 C
ATOM 19 O4 U B1238 14.809 89.948 59.255 1.00112.34 O
ATOM 20 C5 U B1238 14.719 89.836 61.631 1.00111.91 C
ATOM 21 C6 U B1238 14.786 90.549 62.762 1.00111.10 C
ATOM 22 P A B1239 10.601 94.376 65.514 1.00106.05 P
ATOM 23 OP1 A B1239 10.148 95.319 66.572 1.00105.81 O
ATOM 24 OP2 A B1239 10.077 92.982 65.504 1.00105.98 O
ATOM 25 O5' A B1239 10.280 95.045 64.103 1.00103.22 O
TER
ATOM 2 P A A1237 9.974 86.484 59.983 1.00 67.38 P
ATOM 3 OP1 A A1237 11.145 85.659 60.359 1.00 65.28 O
ATOM 4 OP2 A A1237 8.618 86.084 60.434 1.00 68.38 O
ATOM 5 O5' A A1237 10.214 87.972 60.487 1.00 70.17 O
ATOM 6 C5' A A1237 11.464 88.640 60.257 1.00 75.03 C
ATOM 7 C4' A A1237 11.348 90.093 60.637 1.00 77.32 C
ATOM 8 O4' A A1237 10.409 90.746 59.748 1.00 77.15 O
ATOM 9 C3' A A1237 10.792 90.345 62.027 1.00 80.32 C
ATOM 10 O3' A A1237 11.822 90.251 63.000 1.00 86.13 O
ATOM 11 C2' A A1237 10.226 91.754 61.902 1.00 79.58 C
ATOM 12 O2' A A1237 11.211 92.761 62.030 1.00 80.88 O
ATOM 13 C1' A A1237 9.694 91.739 60.464 1.00 77.92 C
ATOM 14 N9 A A1237 8.269 91.439 60.359 1.00 76.34 N
ATOM 15 C8 A A1237 7.653 90.215 60.434 1.00 76.35 C
ATOM 16 N7 A A1237 6.352 90.270 60.307 1.00 75.84 N
ATOM 17 C5 A A1237 6.091 91.620 60.137 1.00 76.48 C
ATOM 18 C6 A A1237 4.896 92.336 59.959 1.00 77.70 C
ATOM 19 N6 A A1237 3.687 91.766 59.929 1.00 77.84 N
ATOM 20 N1 A A1237 4.984 93.677 59.816 1.00 78.40 N
ATOM 21 C2 A A1237 6.195 94.247 59.860 1.00 77.30 C
ATOM 22 N3 A A1237 7.387 93.682 60.030 1.00 77.00 N
ATOM 23 C4 A A1237 7.264 92.352 60.163 1.00 76.39 C
ATOM 24 P U A1238 11.513 89.611 64.443 1.00 90.86 P
ATOM 25 OP1 U A1238 11.554 88.133 64.298 1.00 89.36 O
ATOM 26 OP2 U A1238 10.295 90.260 64.996 1.00 90.41 O
ATOM 27 O5' U A1238 12.780 90.049 65.309 1.00 95.32 O
TER
ATOM 1 O3' A B1237 11.822 90.251 63.000 1.00 86.13 O
ATOM 2 P U B1238 11.513 89.611 64.443 1.00 90.86 P
ATOM 3 OP1 U B1238 11.554 88.133 64.298 1.00 89.36 O
ATOM 4 OP2 U B1238 10.295 90.260 64.996 1.00 90.41 O
ATOM 5 O5' U B1238 12.780 90.049 65.309 1.00 95.32 O
ATOM 6 C5' U B1238 12.712 91.131 66.280 1.00101.40 C
ATOM 7 C4' U B1238 13.579 92.301 65.842 1.00104.66 C
ATOM 8 O4' U B1238 14.732 91.787 65.119 1.00106.57 O
ATOM 9 C3' U B1238 12.932 93.292 64.880 1.00106.19 C
ATOM 10 O3' U B1238 12.212 94.312 65.589 1.00106.12 O
ATOM 11 C2' U B1238 14.142 93.884 64.163 1.00107.65 C
ATOM 12 O2' U B1238 14.808 94.875 64.921 1.00108.58 O
ATOM 13 C1' U B1238 15.064 92.664 64.051 1.00108.74 C
ATOM 14 N1 U B1238 14.984 91.919 62.777 1.00111.06 N
ATOM 15 C2 U B1238 15.121 92.629 61.578 1.00112.23 C
ATOM 16 O2 U B1238 15.298 93.840 61.527 1.00112.61 O
ATOM 17 N3 U B1238 15.042 91.862 60.439 1.00112.65 N
ATOM 18 C4 U B1238 14.851 90.494 60.363 1.00112.90 C
ATOM 19 O4 U B1238 14.809 89.948 59.255 1.00112.34 O
ATOM 20 C5 U B1238 14.719 89.836 61.631 1.00111.91 C
ATOM 21 C6 U B1238 14.786 90.549 62.762 1.00111.10 C
ATOM 22 P A B1239 10.601 94.376 65.514 1.00106.05 P
ATOM 23 OP1 A B1239 10.148 95.319 66.572 1.00105.81 O
ATOM 24 OP2 A B1239 10.077 92.982 65.504 1.00105.98 O
ATOM 25 O5' A B1239 10.280 95.045 64.103 1.00103.22 O
TER
Atoms:
OP1: (11.145,85.659,60.359)
OP2: (8.618,86.084,60.434)
C3': (10.792,90.345,62.027)
C1': (9.694,91.739,60.464)
C5': (11.464,88.640,60.257)
O4': (10.409,90.746,59.748)
C8: (7.653,90.215,60.434)
O2': (11.211,92.761,62.030)
C6: (4.896,92.336,59.959)
C5: (6.091,91.620,60.137)
C4: (7.264,92.352,60.163)
P: (9.974,86.484,59.983)
C4': (11.348,90.093,60.637)
C2': (10.226,91.754,61.902)
C2: (6.195,94.247,59.860)
N1: (4.984,93.677,59.816)
N3: (7.387,93.682,60.030)
N6: (3.687,91.766,59.929)
N7: (6.352,90.270,60.307)
N9: (8.269,91.439,60.359)
O5': (10.214,87.972,60.487)
O3': (11.822,90.251,63.000)
OP2: (8.618,86.084,60.434)
C3': (10.792,90.345,62.027)
C1': (9.694,91.739,60.464)
C5': (11.464,88.640,60.257)
O4': (10.409,90.746,59.748)
C8: (7.653,90.215,60.434)
O2': (11.211,92.761,62.030)
C6: (4.896,92.336,59.959)
C5: (6.091,91.620,60.137)
C4: (7.264,92.352,60.163)
P: (9.974,86.484,59.983)
C4': (11.348,90.093,60.637)
C2': (10.226,91.754,61.902)
C2: (6.195,94.247,59.860)
N1: (4.984,93.677,59.816)
N3: (7.387,93.682,60.030)
N6: (3.687,91.766,59.929)
N7: (6.352,90.270,60.307)
N9: (8.269,91.439,60.359)
O5': (10.214,87.972,60.487)
O3': (11.822,90.251,63.000)
C4: (14.851,90.494,60.363)
N3: (15.042,91.862,60.439)
OP1: (11.554,88.133,64.298)
OP2: (10.295,90.260,64.996)
C2: (15.121,92.629,61.578)
C1': (15.064,92.664,64.051)
C3': (12.932,93.292,64.880)
O5': (12.780,90.049,65.309)
O4': (14.732,91.787,65.119)
C5': (12.712,91.131,66.280)
P: (11.513,89.611,64.443)
C4': (13.579,92.301,65.842)
C2': (14.142,93.884,64.163)
O2': (14.808,94.875,64.921)
N1: (14.984,91.919,62.777)
O4: (14.809,89.948,59.255)
O2: (15.298,93.840,61.527)
C6: (14.786,90.549,62.762)
C5: (14.719,89.836,61.631)
O3': (12.212,94.312,65.589)
N3: (15.042,91.862,60.439)
OP1: (11.554,88.133,64.298)
OP2: (10.295,90.260,64.996)
C2: (15.121,92.629,61.578)
C1': (15.064,92.664,64.051)
C3': (12.932,93.292,64.880)
O5': (12.780,90.049,65.309)
O4': (14.732,91.787,65.119)
C5': (12.712,91.131,66.280)
P: (11.513,89.611,64.443)
C4': (13.579,92.301,65.842)
C2': (14.142,93.884,64.163)
O2': (14.808,94.875,64.921)
N1: (14.984,91.919,62.777)
O4: (14.809,89.948,59.255)
O2: (15.298,93.840,61.527)
C6: (14.786,90.549,62.762)
C5: (14.719,89.836,61.631)
O3': (12.212,94.312,65.589)
Image (generated by PyMOL):