Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:01237:01238
Extra
PDB:
ATOM 1 O3' C A1236 9.961 86.671 58.475 1.00 62.67 O
ATOM 2 P A A1237 9.995 86.706 60.077 1.00 64.16 P
ATOM 3 OP1 A A1237 11.181 85.933 60.513 1.00 61.42 O
ATOM 4 OP2 A A1237 8.651 86.341 60.589 1.00 65.17 O
ATOM 5 O5' A A1237 10.224 88.244 60.415 1.00 67.97 O
ATOM 6 C5' A A1237 11.525 88.849 60.300 1.00 72.80 C
ATOM 7 C4' A A1237 11.457 90.291 60.731 1.00 76.06 C
ATOM 8 O4' A A1237 10.559 91.000 59.844 1.00 76.42 O
ATOM 9 C3' A A1237 10.879 90.509 62.119 1.00 79.09 C
ATOM 10 O3' A A1237 11.890 90.377 63.107 1.00 85.47 O
ATOM 11 C2' A A1237 10.327 91.925 62.027 1.00 78.13 C
ATOM 12 O2' A A1237 11.316 92.920 62.196 1.00 78.63 O
ATOM 13 C1' A A1237 9.814 91.954 60.584 1.00 76.70 C
ATOM 14 N9 A A1237 8.401 91.613 60.453 1.00 75.08 N
ATOM 15 C8 A A1237 7.822 90.373 60.562 1.00 74.64 C
ATOM 16 N7 A A1237 6.524 90.382 60.399 1.00 74.47 N
ATOM 17 C5 A A1237 6.228 91.715 60.166 1.00 75.38 C
ATOM 18 C6 A A1237 5.018 92.384 59.925 1.00 77.00 C
ATOM 19 N6 A A1237 3.829 91.775 59.882 1.00 78.27 N
ATOM 20 N1 A A1237 5.069 93.720 59.729 1.00 76.94 N
ATOM 21 C2 A A1237 6.258 94.328 59.781 1.00 75.89 C
ATOM 22 N3 A A1237 7.461 93.809 60.005 1.00 75.39 N
ATOM 23 C4 A A1237 7.375 92.483 60.191 1.00 75.10 C
ATOM 24 P U A1238 11.538 89.734 64.538 1.00 90.87 P
ATOM 25 OP1 U A1238 11.587 88.253 64.388 1.00 89.46 O
ATOM 26 OP2 U A1238 10.301 90.381 65.056 1.00 90.70 O
ATOM 27 O5' U A1238 12.778 90.173 65.444 1.00 95.16 O
TER
ATOM 1 O3' A B1237 11.890 90.377 63.107 1.00 85.47 O
ATOM 2 P U B1238 11.538 89.734 64.538 1.00 90.87 P
ATOM 3 OP1 U B1238 11.587 88.253 64.388 1.00 89.46 O
ATOM 4 OP2 U B1238 10.301 90.381 65.056 1.00 90.70 O
ATOM 5 O5' U B1238 12.778 90.173 65.444 1.00 95.16 O
ATOM 6 C5' U B1238 12.686 91.268 66.401 1.00100.90 C
ATOM 7 C4' U B1238 13.544 92.441 65.956 1.00104.05 C
ATOM 8 O4' U B1238 14.705 91.930 65.243 1.00105.50 O
ATOM 9 C3' U B1238 12.884 93.413 64.983 1.00105.43 C
ATOM 10 O3' U B1238 12.177 94.443 65.693 1.00105.38 O
ATOM 11 C2' U B1238 14.078 93.992 64.230 1.00106.50 C
ATOM 12 O2' U B1238 14.742 95.020 64.939 1.00107.33 O
ATOM 13 C1' U B1238 15.013 92.779 64.146 1.00107.24 C
ATOM 14 N1 U B1238 14.948 91.985 62.902 1.00109.05 N
ATOM 15 C2 U B1238 14.988 92.652 61.672 1.00109.90 C
ATOM 16 O2 U B1238 15.053 93.870 61.566 1.00110.31 O
ATOM 17 N3 U B1238 14.954 91.832 60.568 1.00110.11 N
ATOM 18 C4 U B1238 14.889 90.449 60.555 1.00110.18 C
ATOM 19 O4 U B1238 14.884 89.852 59.473 1.00109.44 O
ATOM 20 C5 U B1238 14.834 89.839 61.849 1.00109.37 C
ATOM 21 C6 U B1238 14.861 90.604 62.948 1.00109.04 C
ATOM 22 P A B1239 10.568 94.534 65.612 1.00105.53 P
ATOM 23 OP1 A B1239 10.128 95.508 66.648 1.00105.02 O
ATOM 24 OP2 A B1239 10.019 93.148 65.632 1.00105.49 O
ATOM 25 O5' A B1239 10.268 95.177 64.185 1.00102.62 O
TER
ATOM 2 P A A1237 9.995 86.706 60.077 1.00 64.16 P
ATOM 3 OP1 A A1237 11.181 85.933 60.513 1.00 61.42 O
ATOM 4 OP2 A A1237 8.651 86.341 60.589 1.00 65.17 O
ATOM 5 O5' A A1237 10.224 88.244 60.415 1.00 67.97 O
ATOM 6 C5' A A1237 11.525 88.849 60.300 1.00 72.80 C
ATOM 7 C4' A A1237 11.457 90.291 60.731 1.00 76.06 C
ATOM 8 O4' A A1237 10.559 91.000 59.844 1.00 76.42 O
ATOM 9 C3' A A1237 10.879 90.509 62.119 1.00 79.09 C
ATOM 10 O3' A A1237 11.890 90.377 63.107 1.00 85.47 O
ATOM 11 C2' A A1237 10.327 91.925 62.027 1.00 78.13 C
ATOM 12 O2' A A1237 11.316 92.920 62.196 1.00 78.63 O
ATOM 13 C1' A A1237 9.814 91.954 60.584 1.00 76.70 C
ATOM 14 N9 A A1237 8.401 91.613 60.453 1.00 75.08 N
ATOM 15 C8 A A1237 7.822 90.373 60.562 1.00 74.64 C
ATOM 16 N7 A A1237 6.524 90.382 60.399 1.00 74.47 N
ATOM 17 C5 A A1237 6.228 91.715 60.166 1.00 75.38 C
ATOM 18 C6 A A1237 5.018 92.384 59.925 1.00 77.00 C
ATOM 19 N6 A A1237 3.829 91.775 59.882 1.00 78.27 N
ATOM 20 N1 A A1237 5.069 93.720 59.729 1.00 76.94 N
ATOM 21 C2 A A1237 6.258 94.328 59.781 1.00 75.89 C
ATOM 22 N3 A A1237 7.461 93.809 60.005 1.00 75.39 N
ATOM 23 C4 A A1237 7.375 92.483 60.191 1.00 75.10 C
ATOM 24 P U A1238 11.538 89.734 64.538 1.00 90.87 P
ATOM 25 OP1 U A1238 11.587 88.253 64.388 1.00 89.46 O
ATOM 26 OP2 U A1238 10.301 90.381 65.056 1.00 90.70 O
ATOM 27 O5' U A1238 12.778 90.173 65.444 1.00 95.16 O
TER
ATOM 1 O3' A B1237 11.890 90.377 63.107 1.00 85.47 O
ATOM 2 P U B1238 11.538 89.734 64.538 1.00 90.87 P
ATOM 3 OP1 U B1238 11.587 88.253 64.388 1.00 89.46 O
ATOM 4 OP2 U B1238 10.301 90.381 65.056 1.00 90.70 O
ATOM 5 O5' U B1238 12.778 90.173 65.444 1.00 95.16 O
ATOM 6 C5' U B1238 12.686 91.268 66.401 1.00100.90 C
ATOM 7 C4' U B1238 13.544 92.441 65.956 1.00104.05 C
ATOM 8 O4' U B1238 14.705 91.930 65.243 1.00105.50 O
ATOM 9 C3' U B1238 12.884 93.413 64.983 1.00105.43 C
ATOM 10 O3' U B1238 12.177 94.443 65.693 1.00105.38 O
ATOM 11 C2' U B1238 14.078 93.992 64.230 1.00106.50 C
ATOM 12 O2' U B1238 14.742 95.020 64.939 1.00107.33 O
ATOM 13 C1' U B1238 15.013 92.779 64.146 1.00107.24 C
ATOM 14 N1 U B1238 14.948 91.985 62.902 1.00109.05 N
ATOM 15 C2 U B1238 14.988 92.652 61.672 1.00109.90 C
ATOM 16 O2 U B1238 15.053 93.870 61.566 1.00110.31 O
ATOM 17 N3 U B1238 14.954 91.832 60.568 1.00110.11 N
ATOM 18 C4 U B1238 14.889 90.449 60.555 1.00110.18 C
ATOM 19 O4 U B1238 14.884 89.852 59.473 1.00109.44 O
ATOM 20 C5 U B1238 14.834 89.839 61.849 1.00109.37 C
ATOM 21 C6 U B1238 14.861 90.604 62.948 1.00109.04 C
ATOM 22 P A B1239 10.568 94.534 65.612 1.00105.53 P
ATOM 23 OP1 A B1239 10.128 95.508 66.648 1.00105.02 O
ATOM 24 OP2 A B1239 10.019 93.148 65.632 1.00105.49 O
ATOM 25 O5' A B1239 10.268 95.177 64.185 1.00102.62 O
TER
Atoms:
OP1: (11.181,85.933,60.513)
OP2: (8.651,86.341,60.589)
C3': (10.879,90.509,62.119)
C1': (9.814,91.954,60.584)
C5': (11.525,88.849,60.300)
O4': (10.559,91.000,59.844)
C8: (7.822,90.373,60.562)
O2': (11.316,92.920,62.196)
C6: (5.018,92.384,59.925)
C5: (6.228,91.715,60.166)
C4: (7.375,92.483,60.191)
P: (9.995,86.706,60.077)
C4': (11.457,90.291,60.731)
C2': (10.327,91.925,62.027)
C2: (6.258,94.328,59.781)
N1: (5.069,93.720,59.729)
N3: (7.461,93.809,60.005)
N6: (3.829,91.775,59.882)
N7: (6.524,90.382,60.399)
N9: (8.401,91.613,60.453)
O5': (10.224,88.244,60.415)
O3': (11.890,90.377,63.107)
OP2: (8.651,86.341,60.589)
C3': (10.879,90.509,62.119)
C1': (9.814,91.954,60.584)
C5': (11.525,88.849,60.300)
O4': (10.559,91.000,59.844)
C8: (7.822,90.373,60.562)
O2': (11.316,92.920,62.196)
C6: (5.018,92.384,59.925)
C5: (6.228,91.715,60.166)
C4: (7.375,92.483,60.191)
P: (9.995,86.706,60.077)
C4': (11.457,90.291,60.731)
C2': (10.327,91.925,62.027)
C2: (6.258,94.328,59.781)
N1: (5.069,93.720,59.729)
N3: (7.461,93.809,60.005)
N6: (3.829,91.775,59.882)
N7: (6.524,90.382,60.399)
N9: (8.401,91.613,60.453)
O5': (10.224,88.244,60.415)
O3': (11.890,90.377,63.107)
C4: (14.889,90.449,60.555)
N3: (14.954,91.832,60.568)
OP1: (11.587,88.253,64.388)
OP2: (10.301,90.381,65.056)
C2: (14.988,92.652,61.672)
C1': (15.013,92.779,64.146)
C3': (12.884,93.413,64.983)
O5': (12.778,90.173,65.444)
O4': (14.705,91.930,65.243)
C5': (12.686,91.268,66.401)
P: (11.538,89.734,64.538)
C4': (13.544,92.441,65.956)
C2': (14.078,93.992,64.230)
O2': (14.742,95.020,64.939)
N1: (14.948,91.985,62.902)
O4: (14.884,89.852,59.473)
O2: (15.053,93.870,61.566)
C6: (14.861,90.604,62.948)
C5: (14.834,89.839,61.849)
O3': (12.177,94.443,65.693)
N3: (14.954,91.832,60.568)
OP1: (11.587,88.253,64.388)
OP2: (10.301,90.381,65.056)
C2: (14.988,92.652,61.672)
C1': (15.013,92.779,64.146)
C3': (12.884,93.413,64.983)
O5': (12.778,90.173,65.444)
O4': (14.705,91.930,65.243)
C5': (12.686,91.268,66.401)
P: (11.538,89.734,64.538)
C4': (13.544,92.441,65.956)
C2': (14.078,93.992,64.230)
O2': (14.742,95.020,64.939)
N1: (14.948,91.985,62.902)
O4: (14.884,89.852,59.473)
O2: (15.053,93.870,61.566)
C6: (14.861,90.604,62.948)
C5: (14.834,89.839,61.849)
O3': (12.177,94.443,65.693)
Image (generated by PyMOL):