Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:01237:01238
Extra
PDB:
ATOM 1 O3' C A1236 10.158 86.944 58.626 1.00 56.13 O
ATOM 2 P A A1237 10.176 86.963 60.230 1.00 56.80 P
ATOM 3 OP1 A A1237 11.352 86.170 60.659 1.00 53.45 O
ATOM 4 OP2 A A1237 8.823 86.599 60.724 1.00 56.69 O
ATOM 5 O5' A A1237 10.419 88.495 60.587 1.00 59.79 O
ATOM 6 C5' A A1237 11.727 89.089 60.483 1.00 64.27 C
ATOM 7 C4' A A1237 11.660 90.538 60.880 1.00 67.40 C
ATOM 8 O4' A A1237 10.764 91.224 59.973 1.00 67.55 O
ATOM 9 C3' A A1237 11.074 90.785 62.259 1.00 70.79 C
ATOM 10 O3' A A1237 12.083 90.689 63.251 1.00 77.72 O
ATOM 11 C2' A A1237 10.510 92.194 62.132 1.00 69.85 C
ATOM 12 O2' A A1237 11.491 93.203 62.282 1.00 70.57 O
ATOM 13 C1' A A1237 10.005 92.184 60.686 1.00 68.15 C
ATOM 14 N9 A A1237 8.599 91.818 60.559 1.00 67.17 N
ATOM 15 C8 A A1237 8.047 90.565 60.649 1.00 67.20 C
ATOM 16 N7 A A1237 6.750 90.548 60.493 1.00 66.80 N
ATOM 17 C5 A A1237 6.423 91.878 60.285 1.00 67.67 C
ATOM 18 C6 A A1237 5.202 92.520 60.059 1.00 69.24 C
ATOM 19 N6 A A1237 4.032 91.881 60.006 1.00 71.11 N
ATOM 20 N1 A A1237 5.220 93.859 59.888 1.00 70.49 N
ATOM 21 C2 A A1237 6.395 94.496 59.947 1.00 68.70 C
ATOM 22 N3 A A1237 7.609 94.002 60.157 1.00 68.54 N
ATOM 23 C4 A A1237 7.553 92.671 60.320 1.00 67.76 C
ATOM 24 P U A1238 11.753 90.018 64.674 1.00 83.14 P
ATOM 25 OP1 U A1238 11.927 88.552 64.514 1.00 82.19 O
ATOM 26 OP2 U A1238 10.454 90.557 65.167 1.00 83.20 O
ATOM 27 O5' U A1238 12.936 90.547 65.608 1.00 87.72 O
TER
ATOM 1 O3' A B1237 12.083 90.689 63.251 1.00 77.72 O
ATOM 2 P U B1238 11.753 90.018 64.674 1.00 83.14 P
ATOM 3 OP1 U B1238 11.927 88.552 64.514 1.00 82.19 O
ATOM 4 OP2 U B1238 10.454 90.557 65.167 1.00 83.20 O
ATOM 5 O5' U B1238 12.936 90.547 65.608 1.00 87.72 O
ATOM 6 C5' U B1238 12.743 91.625 66.566 1.00 93.73 C
ATOM 7 C4' U B1238 13.579 92.834 66.181 1.00 97.39 C
ATOM 8 O4' U B1238 14.772 92.376 65.485 1.00 99.03 O
ATOM 9 C3' U B1238 12.917 93.810 65.215 1.00 99.13 C
ATOM 10 O3' U B1238 12.160 94.798 65.922 1.00 99.02 O
ATOM 11 C2' U B1238 14.112 94.445 64.514 1.00100.48 C
ATOM 12 O2' U B1238 14.721 95.469 65.276 1.00101.81 O
ATOM 13 C1' U B1238 15.077 93.258 64.414 1.00101.34 C
ATOM 14 N1 U B1238 15.036 92.495 63.149 1.00103.32 N
ATOM 15 C2 U B1238 15.022 93.197 61.938 1.00104.35 C
ATOM 16 O2 U B1238 15.032 94.419 61.867 1.00105.05 O
ATOM 17 N3 U B1238 14.998 92.407 60.813 1.00104.69 N
ATOM 18 C4 U B1238 14.992 91.026 60.761 1.00105.26 C
ATOM 19 O4 U B1238 14.979 90.459 59.663 1.00105.45 O
ATOM 20 C5 U B1238 15.003 90.379 62.039 1.00104.51 C
ATOM 21 C6 U B1238 15.023 91.113 63.157 1.00103.58 C
ATOM 22 P A B1239 10.566 94.897 65.718 1.00 98.91 P
ATOM 23 OP1 A B1239 10.062 95.874 66.717 1.00 98.74 O
ATOM 24 OP2 A B1239 10.018 93.511 65.705 1.00 98.87 O
ATOM 25 O5' A B1239 10.377 95.535 64.269 1.00 96.34 O
TER
ATOM 2 P A A1237 10.176 86.963 60.230 1.00 56.80 P
ATOM 3 OP1 A A1237 11.352 86.170 60.659 1.00 53.45 O
ATOM 4 OP2 A A1237 8.823 86.599 60.724 1.00 56.69 O
ATOM 5 O5' A A1237 10.419 88.495 60.587 1.00 59.79 O
ATOM 6 C5' A A1237 11.727 89.089 60.483 1.00 64.27 C
ATOM 7 C4' A A1237 11.660 90.538 60.880 1.00 67.40 C
ATOM 8 O4' A A1237 10.764 91.224 59.973 1.00 67.55 O
ATOM 9 C3' A A1237 11.074 90.785 62.259 1.00 70.79 C
ATOM 10 O3' A A1237 12.083 90.689 63.251 1.00 77.72 O
ATOM 11 C2' A A1237 10.510 92.194 62.132 1.00 69.85 C
ATOM 12 O2' A A1237 11.491 93.203 62.282 1.00 70.57 O
ATOM 13 C1' A A1237 10.005 92.184 60.686 1.00 68.15 C
ATOM 14 N9 A A1237 8.599 91.818 60.559 1.00 67.17 N
ATOM 15 C8 A A1237 8.047 90.565 60.649 1.00 67.20 C
ATOM 16 N7 A A1237 6.750 90.548 60.493 1.00 66.80 N
ATOM 17 C5 A A1237 6.423 91.878 60.285 1.00 67.67 C
ATOM 18 C6 A A1237 5.202 92.520 60.059 1.00 69.24 C
ATOM 19 N6 A A1237 4.032 91.881 60.006 1.00 71.11 N
ATOM 20 N1 A A1237 5.220 93.859 59.888 1.00 70.49 N
ATOM 21 C2 A A1237 6.395 94.496 59.947 1.00 68.70 C
ATOM 22 N3 A A1237 7.609 94.002 60.157 1.00 68.54 N
ATOM 23 C4 A A1237 7.553 92.671 60.320 1.00 67.76 C
ATOM 24 P U A1238 11.753 90.018 64.674 1.00 83.14 P
ATOM 25 OP1 U A1238 11.927 88.552 64.514 1.00 82.19 O
ATOM 26 OP2 U A1238 10.454 90.557 65.167 1.00 83.20 O
ATOM 27 O5' U A1238 12.936 90.547 65.608 1.00 87.72 O
TER
ATOM 1 O3' A B1237 12.083 90.689 63.251 1.00 77.72 O
ATOM 2 P U B1238 11.753 90.018 64.674 1.00 83.14 P
ATOM 3 OP1 U B1238 11.927 88.552 64.514 1.00 82.19 O
ATOM 4 OP2 U B1238 10.454 90.557 65.167 1.00 83.20 O
ATOM 5 O5' U B1238 12.936 90.547 65.608 1.00 87.72 O
ATOM 6 C5' U B1238 12.743 91.625 66.566 1.00 93.73 C
ATOM 7 C4' U B1238 13.579 92.834 66.181 1.00 97.39 C
ATOM 8 O4' U B1238 14.772 92.376 65.485 1.00 99.03 O
ATOM 9 C3' U B1238 12.917 93.810 65.215 1.00 99.13 C
ATOM 10 O3' U B1238 12.160 94.798 65.922 1.00 99.02 O
ATOM 11 C2' U B1238 14.112 94.445 64.514 1.00100.48 C
ATOM 12 O2' U B1238 14.721 95.469 65.276 1.00101.81 O
ATOM 13 C1' U B1238 15.077 93.258 64.414 1.00101.34 C
ATOM 14 N1 U B1238 15.036 92.495 63.149 1.00103.32 N
ATOM 15 C2 U B1238 15.022 93.197 61.938 1.00104.35 C
ATOM 16 O2 U B1238 15.032 94.419 61.867 1.00105.05 O
ATOM 17 N3 U B1238 14.998 92.407 60.813 1.00104.69 N
ATOM 18 C4 U B1238 14.992 91.026 60.761 1.00105.26 C
ATOM 19 O4 U B1238 14.979 90.459 59.663 1.00105.45 O
ATOM 20 C5 U B1238 15.003 90.379 62.039 1.00104.51 C
ATOM 21 C6 U B1238 15.023 91.113 63.157 1.00103.58 C
ATOM 22 P A B1239 10.566 94.897 65.718 1.00 98.91 P
ATOM 23 OP1 A B1239 10.062 95.874 66.717 1.00 98.74 O
ATOM 24 OP2 A B1239 10.018 93.511 65.705 1.00 98.87 O
ATOM 25 O5' A B1239 10.377 95.535 64.269 1.00 96.34 O
TER
Atoms:
OP1: (11.352,86.170,60.659)
OP2: (8.823,86.599,60.724)
C3': (11.074,90.785,62.259)
C1': (10.005,92.184,60.686)
C5': (11.727,89.089,60.483)
O4': (10.764,91.224,59.973)
C8: (8.047,90.565,60.649)
O2': (11.491,93.203,62.282)
C6: (5.202,92.520,60.059)
C5: (6.423,91.878,60.285)
C4: (7.553,92.671,60.320)
P: (10.176,86.963,60.230)
C4': (11.660,90.538,60.880)
C2': (10.510,92.194,62.132)
C2: (6.395,94.496,59.947)
N1: (5.220,93.859,59.888)
N3: (7.609,94.002,60.157)
N6: (4.032,91.881,60.006)
N7: (6.750,90.548,60.493)
N9: (8.599,91.818,60.559)
O5': (10.419,88.495,60.587)
O3': (12.083,90.689,63.251)
OP2: (8.823,86.599,60.724)
C3': (11.074,90.785,62.259)
C1': (10.005,92.184,60.686)
C5': (11.727,89.089,60.483)
O4': (10.764,91.224,59.973)
C8: (8.047,90.565,60.649)
O2': (11.491,93.203,62.282)
C6: (5.202,92.520,60.059)
C5: (6.423,91.878,60.285)
C4: (7.553,92.671,60.320)
P: (10.176,86.963,60.230)
C4': (11.660,90.538,60.880)
C2': (10.510,92.194,62.132)
C2: (6.395,94.496,59.947)
N1: (5.220,93.859,59.888)
N3: (7.609,94.002,60.157)
N6: (4.032,91.881,60.006)
N7: (6.750,90.548,60.493)
N9: (8.599,91.818,60.559)
O5': (10.419,88.495,60.587)
O3': (12.083,90.689,63.251)
C4: (14.992,91.026,60.761)
N3: (14.998,92.407,60.813)
OP1: (11.927,88.552,64.514)
OP2: (10.454,90.557,65.167)
C2: (15.022,93.197,61.938)
C1': (15.077,93.258,64.414)
C3': (12.917,93.810,65.215)
O5': (12.936,90.547,65.608)
O4': (14.772,92.376,65.485)
C5': (12.743,91.625,66.566)
P: (11.753,90.018,64.674)
C4': (13.579,92.834,66.181)
C2': (14.112,94.445,64.514)
O2': (14.721,95.469,65.276)
N1: (15.036,92.495,63.149)
O4: (14.979,90.459,59.663)
O2: (15.032,94.419,61.867)
C6: (15.023,91.113,63.157)
C5: (15.003,90.379,62.039)
O3': (12.160,94.798,65.922)
N3: (14.998,92.407,60.813)
OP1: (11.927,88.552,64.514)
OP2: (10.454,90.557,65.167)
C2: (15.022,93.197,61.938)
C1': (15.077,93.258,64.414)
C3': (12.917,93.810,65.215)
O5': (12.936,90.547,65.608)
O4': (14.772,92.376,65.485)
C5': (12.743,91.625,66.566)
P: (11.753,90.018,64.674)
C4': (13.579,92.834,66.181)
C2': (14.112,94.445,64.514)
O2': (14.721,95.469,65.276)
N1: (15.036,92.495,63.149)
O4: (14.979,90.459,59.663)
O2: (15.032,94.419,61.867)
C6: (15.023,91.113,63.157)
C5: (15.003,90.379,62.039)
O3': (12.160,94.798,65.922)
Image (generated by PyMOL):