Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:01237:01238
Extra
PDB:
ATOM 1 O3' C A1236 10.353 87.141 58.693 1.00 60.94 O
ATOM 2 P A A1237 10.391 87.112 60.293 1.00 60.32 P
ATOM 3 OP1 A A1237 11.593 86.340 60.676 1.00 59.83 O
ATOM 4 OP2 A A1237 9.059 86.706 60.802 1.00 61.11 O
ATOM 5 O5' A A1237 10.608 88.634 60.696 1.00 64.77 O
ATOM 6 C5' A A1237 11.874 89.286 60.484 1.00 68.72 C
ATOM 7 C4' A A1237 11.781 90.727 60.905 1.00 72.00 C
ATOM 8 O4' A A1237 10.872 91.424 60.018 1.00 72.35 O
ATOM 9 C3' A A1237 11.190 90.942 62.287 1.00 75.18 C
ATOM 10 O3' A A1237 12.178 90.793 63.291 1.00 82.28 O
ATOM 11 C2' A A1237 10.655 92.362 62.196 1.00 74.13 C
ATOM 12 O2' A A1237 11.656 93.342 62.370 1.00 74.39 O
ATOM 13 C1' A A1237 10.144 92.394 60.752 1.00 73.42 C
ATOM 14 N9 A A1237 8.724 92.071 60.650 1.00 73.05 N
ATOM 15 C8 A A1237 8.126 90.837 60.709 1.00 72.55 C
ATOM 16 N7 A A1237 6.821 90.879 60.618 1.00 72.72 N
ATOM 17 C5 A A1237 6.540 92.230 60.484 1.00 73.23 C
ATOM 18 C6 A A1237 5.333 92.936 60.356 1.00 73.94 C
ATOM 19 N6 A A1237 4.131 92.355 60.353 1.00 74.07 N
ATOM 20 N1 A A1237 5.401 94.279 60.236 1.00 74.51 N
ATOM 21 C2 A A1237 6.607 94.863 60.251 1.00 74.64 C
ATOM 22 N3 A A1237 7.810 94.308 60.374 1.00 73.70 N
ATOM 23 C4 A A1237 7.704 92.974 60.489 1.00 73.29 C
ATOM 24 P U A1238 11.783 90.184 64.726 1.00 88.10 P
ATOM 25 OP1 U A1238 11.888 88.700 64.624 1.00 85.41 O
ATOM 26 OP2 U A1238 10.502 90.802 65.170 1.00 87.26 O
ATOM 27 O5' U A1238 12.967 90.705 65.665 1.00 93.47 O
TER
ATOM 1 O3' A B1237 12.178 90.793 63.291 1.00 82.28 O
ATOM 2 P U B1238 11.783 90.184 64.726 1.00 88.10 P
ATOM 3 OP1 U B1238 11.888 88.700 64.624 1.00 85.41 O
ATOM 4 OP2 U B1238 10.502 90.802 65.170 1.00 87.26 O
ATOM 5 O5' U B1238 12.967 90.705 65.665 1.00 93.47 O
ATOM 6 C5' U B1238 12.777 91.784 66.630 1.00100.13 C
ATOM 7 C4' U B1238 13.648 92.984 66.280 1.00103.94 C
ATOM 8 O4' U B1238 14.843 92.522 65.588 1.00105.27 O
ATOM 9 C3' U B1238 13.023 94.009 65.338 1.00105.00 C
ATOM 10 O3' U B1238 12.274 94.993 66.060 1.00104.46 O
ATOM 11 C2' U B1238 14.243 94.634 64.673 1.00106.38 C
ATOM 12 O2' U B1238 14.867 95.609 65.489 1.00106.48 O
ATOM 13 C1' U B1238 15.172 93.421 64.537 1.00107.43 C
ATOM 14 N1 U B1238 15.119 92.682 63.255 1.00109.21 N
ATOM 15 C2 U B1238 15.063 93.400 62.053 1.00110.21 C
ATOM 16 O2 U B1238 15.038 94.623 61.995 1.00111.06 O
ATOM 17 N3 U B1238 15.037 92.625 60.918 1.00110.42 N
ATOM 18 C4 U B1238 15.057 91.247 60.845 1.00110.78 C
ATOM 19 O4 U B1238 15.030 90.699 59.740 1.00110.38 O
ATOM 20 C5 U B1238 15.108 90.582 62.112 1.00110.10 C
ATOM 21 C6 U B1238 15.136 91.298 63.241 1.00109.26 C
ATOM 22 P A B1239 10.674 95.071 65.896 1.00104.25 P
ATOM 23 OP1 A B1239 10.161 95.963 66.965 1.00104.86 O
ATOM 24 OP2 A B1239 10.153 93.685 65.788 1.00105.20 O
ATOM 25 O5' A B1239 10.438 95.794 64.496 1.00101.33 O
TER
ATOM 2 P A A1237 10.391 87.112 60.293 1.00 60.32 P
ATOM 3 OP1 A A1237 11.593 86.340 60.676 1.00 59.83 O
ATOM 4 OP2 A A1237 9.059 86.706 60.802 1.00 61.11 O
ATOM 5 O5' A A1237 10.608 88.634 60.696 1.00 64.77 O
ATOM 6 C5' A A1237 11.874 89.286 60.484 1.00 68.72 C
ATOM 7 C4' A A1237 11.781 90.727 60.905 1.00 72.00 C
ATOM 8 O4' A A1237 10.872 91.424 60.018 1.00 72.35 O
ATOM 9 C3' A A1237 11.190 90.942 62.287 1.00 75.18 C
ATOM 10 O3' A A1237 12.178 90.793 63.291 1.00 82.28 O
ATOM 11 C2' A A1237 10.655 92.362 62.196 1.00 74.13 C
ATOM 12 O2' A A1237 11.656 93.342 62.370 1.00 74.39 O
ATOM 13 C1' A A1237 10.144 92.394 60.752 1.00 73.42 C
ATOM 14 N9 A A1237 8.724 92.071 60.650 1.00 73.05 N
ATOM 15 C8 A A1237 8.126 90.837 60.709 1.00 72.55 C
ATOM 16 N7 A A1237 6.821 90.879 60.618 1.00 72.72 N
ATOM 17 C5 A A1237 6.540 92.230 60.484 1.00 73.23 C
ATOM 18 C6 A A1237 5.333 92.936 60.356 1.00 73.94 C
ATOM 19 N6 A A1237 4.131 92.355 60.353 1.00 74.07 N
ATOM 20 N1 A A1237 5.401 94.279 60.236 1.00 74.51 N
ATOM 21 C2 A A1237 6.607 94.863 60.251 1.00 74.64 C
ATOM 22 N3 A A1237 7.810 94.308 60.374 1.00 73.70 N
ATOM 23 C4 A A1237 7.704 92.974 60.489 1.00 73.29 C
ATOM 24 P U A1238 11.783 90.184 64.726 1.00 88.10 P
ATOM 25 OP1 U A1238 11.888 88.700 64.624 1.00 85.41 O
ATOM 26 OP2 U A1238 10.502 90.802 65.170 1.00 87.26 O
ATOM 27 O5' U A1238 12.967 90.705 65.665 1.00 93.47 O
TER
ATOM 1 O3' A B1237 12.178 90.793 63.291 1.00 82.28 O
ATOM 2 P U B1238 11.783 90.184 64.726 1.00 88.10 P
ATOM 3 OP1 U B1238 11.888 88.700 64.624 1.00 85.41 O
ATOM 4 OP2 U B1238 10.502 90.802 65.170 1.00 87.26 O
ATOM 5 O5' U B1238 12.967 90.705 65.665 1.00 93.47 O
ATOM 6 C5' U B1238 12.777 91.784 66.630 1.00100.13 C
ATOM 7 C4' U B1238 13.648 92.984 66.280 1.00103.94 C
ATOM 8 O4' U B1238 14.843 92.522 65.588 1.00105.27 O
ATOM 9 C3' U B1238 13.023 94.009 65.338 1.00105.00 C
ATOM 10 O3' U B1238 12.274 94.993 66.060 1.00104.46 O
ATOM 11 C2' U B1238 14.243 94.634 64.673 1.00106.38 C
ATOM 12 O2' U B1238 14.867 95.609 65.489 1.00106.48 O
ATOM 13 C1' U B1238 15.172 93.421 64.537 1.00107.43 C
ATOM 14 N1 U B1238 15.119 92.682 63.255 1.00109.21 N
ATOM 15 C2 U B1238 15.063 93.400 62.053 1.00110.21 C
ATOM 16 O2 U B1238 15.038 94.623 61.995 1.00111.06 O
ATOM 17 N3 U B1238 15.037 92.625 60.918 1.00110.42 N
ATOM 18 C4 U B1238 15.057 91.247 60.845 1.00110.78 C
ATOM 19 O4 U B1238 15.030 90.699 59.740 1.00110.38 O
ATOM 20 C5 U B1238 15.108 90.582 62.112 1.00110.10 C
ATOM 21 C6 U B1238 15.136 91.298 63.241 1.00109.26 C
ATOM 22 P A B1239 10.674 95.071 65.896 1.00104.25 P
ATOM 23 OP1 A B1239 10.161 95.963 66.965 1.00104.86 O
ATOM 24 OP2 A B1239 10.153 93.685 65.788 1.00105.20 O
ATOM 25 O5' A B1239 10.438 95.794 64.496 1.00101.33 O
TER
Atoms:
OP1: (11.593,86.340,60.676)
OP2: (9.059,86.706,60.802)
C3': (11.190,90.942,62.287)
C1': (10.144,92.394,60.752)
C5': (11.874,89.286,60.484)
O4': (10.872,91.424,60.018)
C8: (8.126,90.837,60.709)
O2': (11.656,93.342,62.370)
C6: (5.333,92.936,60.356)
C5: (6.540,92.230,60.484)
C4: (7.704,92.974,60.489)
P: (10.391,87.112,60.293)
C4': (11.781,90.727,60.905)
C2': (10.655,92.362,62.196)
C2: (6.607,94.863,60.251)
N1: (5.401,94.279,60.236)
N3: (7.810,94.308,60.374)
N6: (4.131,92.355,60.353)
N7: (6.821,90.879,60.618)
N9: (8.724,92.071,60.650)
O5': (10.608,88.634,60.696)
O3': (12.178,90.793,63.291)
OP2: (9.059,86.706,60.802)
C3': (11.190,90.942,62.287)
C1': (10.144,92.394,60.752)
C5': (11.874,89.286,60.484)
O4': (10.872,91.424,60.018)
C8: (8.126,90.837,60.709)
O2': (11.656,93.342,62.370)
C6: (5.333,92.936,60.356)
C5: (6.540,92.230,60.484)
C4: (7.704,92.974,60.489)
P: (10.391,87.112,60.293)
C4': (11.781,90.727,60.905)
C2': (10.655,92.362,62.196)
C2: (6.607,94.863,60.251)
N1: (5.401,94.279,60.236)
N3: (7.810,94.308,60.374)
N6: (4.131,92.355,60.353)
N7: (6.821,90.879,60.618)
N9: (8.724,92.071,60.650)
O5': (10.608,88.634,60.696)
O3': (12.178,90.793,63.291)
C4: (15.057,91.247,60.845)
N3: (15.037,92.625,60.918)
OP1: (11.888,88.700,64.624)
OP2: (10.502,90.802,65.170)
C2: (15.063,93.400,62.053)
C1': (15.172,93.421,64.537)
C3': (13.023,94.009,65.338)
O5': (12.967,90.705,65.665)
O4': (14.843,92.522,65.588)
C5': (12.777,91.784,66.630)
P: (11.783,90.184,64.726)
C4': (13.648,92.984,66.280)
C2': (14.243,94.634,64.673)
O2': (14.867,95.609,65.489)
N1: (15.119,92.682,63.255)
O4: (15.030,90.699,59.740)
O2: (15.038,94.623,61.995)
C6: (15.136,91.298,63.241)
C5: (15.108,90.582,62.112)
O3': (12.274,94.993,66.060)
N3: (15.037,92.625,60.918)
OP1: (11.888,88.700,64.624)
OP2: (10.502,90.802,65.170)
C2: (15.063,93.400,62.053)
C1': (15.172,93.421,64.537)
C3': (13.023,94.009,65.338)
O5': (12.967,90.705,65.665)
O4': (14.843,92.522,65.588)
C5': (12.777,91.784,66.630)
P: (11.783,90.184,64.726)
C4': (13.648,92.984,66.280)
C2': (14.243,94.634,64.673)
O2': (14.867,95.609,65.489)
N1: (15.119,92.682,63.255)
O4: (15.030,90.699,59.740)
O2: (15.038,94.623,61.995)
C6: (15.136,91.298,63.241)
C5: (15.108,90.582,62.112)
O3': (12.274,94.993,66.060)
Image (generated by PyMOL):