Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01237:01238
Extra
PDB:
ATOM 1 O3' C A1236 10.322 87.229 58.717 1.00 56.20 O
ATOM 2 P A A1237 10.302 87.098 60.310 1.00 58.02 P
ATOM 3 OP1 A A1237 11.487 86.303 60.695 1.00 58.45 O
ATOM 4 OP2 A A1237 8.951 86.661 60.733 1.00 58.66 O
ATOM 5 O5' A A1237 10.512 88.592 60.815 1.00 62.35 O
ATOM 6 C5' A A1237 11.764 89.276 60.613 1.00 66.01 C
ATOM 7 C4' A A1237 11.613 90.738 60.943 1.00 68.57 C
ATOM 8 O4' A A1237 10.677 91.343 60.017 1.00 68.66 O
ATOM 9 C3' A A1237 11.024 91.029 62.311 1.00 71.38 C
ATOM 10 O3' A A1237 12.032 90.982 63.314 1.00 78.52 O
ATOM 11 C2' A A1237 10.448 92.427 62.124 1.00 69.55 C
ATOM 12 O2' A A1237 11.419 93.447 62.204 1.00 69.02 O
ATOM 13 C1' A A1237 9.935 92.349 60.685 1.00 69.03 C
ATOM 14 N9 A A1237 8.516 92.012 60.597 1.00 68.32 N
ATOM 15 C8 A A1237 7.932 90.775 60.691 1.00 68.43 C
ATOM 16 N7 A A1237 6.627 90.801 60.601 1.00 68.39 N
ATOM 17 C5 A A1237 6.330 92.144 60.431 1.00 68.16 C
ATOM 18 C6 A A1237 5.113 92.833 60.290 1.00 68.68 C
ATOM 19 N6 A A1237 3.918 92.238 60.302 1.00 69.80 N
ATOM 20 N1 A A1237 5.164 94.173 60.141 1.00 68.41 N
ATOM 21 C2 A A1237 6.362 94.769 60.139 1.00 68.77 C
ATOM 22 N3 A A1237 7.572 94.231 60.269 1.00 68.37 N
ATOM 23 C4 A A1237 7.485 92.900 60.415 1.00 68.14 C
ATOM 24 P U A1238 11.814 90.092 64.640 1.00 84.10 P
ATOM 25 OP1 U A1238 12.194 88.691 64.307 1.00 82.74 O
ATOM 26 OP2 U A1238 10.460 90.372 65.198 1.00 83.92 O
ATOM 27 O5' U A1238 12.919 90.664 65.645 1.00 89.20 O
TER
ATOM 1 O3' A B1237 12.032 90.982 63.314 1.00 78.52 O
ATOM 2 P U B1238 11.814 90.092 64.640 1.00 84.10 P
ATOM 3 OP1 U B1238 12.194 88.691 64.307 1.00 82.74 O
ATOM 4 OP2 U B1238 10.460 90.372 65.198 1.00 83.92 O
ATOM 5 O5' U B1238 12.919 90.664 65.645 1.00 89.20 O
ATOM 6 C5' U B1238 12.632 91.746 66.588 1.00 95.46 C
ATOM 7 C4' U B1238 13.526 92.951 66.317 1.00 98.46 C
ATOM 8 O4' U B1238 14.761 92.499 65.694 1.00100.26 O
ATOM 9 C3' U B1238 12.950 93.995 65.364 1.00 99.33 C
ATOM 10 O3' U B1238 12.212 94.994 66.079 1.00 97.95 O
ATOM 11 C2' U B1238 14.195 94.585 64.710 1.00100.72 C
ATOM 12 O2' U B1238 14.831 95.570 65.505 1.00100.26 O
ATOM 13 C1' U B1238 15.102 93.351 64.610 1.00102.14 C
ATOM 14 N1 U B1238 15.049 92.556 63.363 1.00104.18 N
ATOM 15 C2 U B1238 14.907 93.209 62.131 1.00105.18 C
ATOM 16 O2 U B1238 14.804 94.424 62.016 1.00105.56 O
ATOM 17 N3 U B1238 14.890 92.376 61.036 1.00105.64 N
ATOM 18 C4 U B1238 14.996 90.996 61.029 1.00105.60 C
ATOM 19 O4 U B1238 14.988 90.391 59.953 1.00105.11 O
ATOM 20 C5 U B1238 15.130 90.401 62.322 1.00105.06 C
ATOM 21 C6 U B1238 15.152 91.175 63.413 1.00104.50 C
ATOM 22 P A B1239 10.605 95.044 65.974 1.00 97.27 P
ATOM 23 OP1 A B1239 10.138 96.018 66.990 1.00 97.36 O
ATOM 24 OP2 A B1239 10.086 93.652 66.003 1.00 98.22 O
ATOM 25 O5' A B1239 10.309 95.660 64.535 1.00 93.80 O
TER
ATOM 2 P A A1237 10.302 87.098 60.310 1.00 58.02 P
ATOM 3 OP1 A A1237 11.487 86.303 60.695 1.00 58.45 O
ATOM 4 OP2 A A1237 8.951 86.661 60.733 1.00 58.66 O
ATOM 5 O5' A A1237 10.512 88.592 60.815 1.00 62.35 O
ATOM 6 C5' A A1237 11.764 89.276 60.613 1.00 66.01 C
ATOM 7 C4' A A1237 11.613 90.738 60.943 1.00 68.57 C
ATOM 8 O4' A A1237 10.677 91.343 60.017 1.00 68.66 O
ATOM 9 C3' A A1237 11.024 91.029 62.311 1.00 71.38 C
ATOM 10 O3' A A1237 12.032 90.982 63.314 1.00 78.52 O
ATOM 11 C2' A A1237 10.448 92.427 62.124 1.00 69.55 C
ATOM 12 O2' A A1237 11.419 93.447 62.204 1.00 69.02 O
ATOM 13 C1' A A1237 9.935 92.349 60.685 1.00 69.03 C
ATOM 14 N9 A A1237 8.516 92.012 60.597 1.00 68.32 N
ATOM 15 C8 A A1237 7.932 90.775 60.691 1.00 68.43 C
ATOM 16 N7 A A1237 6.627 90.801 60.601 1.00 68.39 N
ATOM 17 C5 A A1237 6.330 92.144 60.431 1.00 68.16 C
ATOM 18 C6 A A1237 5.113 92.833 60.290 1.00 68.68 C
ATOM 19 N6 A A1237 3.918 92.238 60.302 1.00 69.80 N
ATOM 20 N1 A A1237 5.164 94.173 60.141 1.00 68.41 N
ATOM 21 C2 A A1237 6.362 94.769 60.139 1.00 68.77 C
ATOM 22 N3 A A1237 7.572 94.231 60.269 1.00 68.37 N
ATOM 23 C4 A A1237 7.485 92.900 60.415 1.00 68.14 C
ATOM 24 P U A1238 11.814 90.092 64.640 1.00 84.10 P
ATOM 25 OP1 U A1238 12.194 88.691 64.307 1.00 82.74 O
ATOM 26 OP2 U A1238 10.460 90.372 65.198 1.00 83.92 O
ATOM 27 O5' U A1238 12.919 90.664 65.645 1.00 89.20 O
TER
ATOM 1 O3' A B1237 12.032 90.982 63.314 1.00 78.52 O
ATOM 2 P U B1238 11.814 90.092 64.640 1.00 84.10 P
ATOM 3 OP1 U B1238 12.194 88.691 64.307 1.00 82.74 O
ATOM 4 OP2 U B1238 10.460 90.372 65.198 1.00 83.92 O
ATOM 5 O5' U B1238 12.919 90.664 65.645 1.00 89.20 O
ATOM 6 C5' U B1238 12.632 91.746 66.588 1.00 95.46 C
ATOM 7 C4' U B1238 13.526 92.951 66.317 1.00 98.46 C
ATOM 8 O4' U B1238 14.761 92.499 65.694 1.00100.26 O
ATOM 9 C3' U B1238 12.950 93.995 65.364 1.00 99.33 C
ATOM 10 O3' U B1238 12.212 94.994 66.079 1.00 97.95 O
ATOM 11 C2' U B1238 14.195 94.585 64.710 1.00100.72 C
ATOM 12 O2' U B1238 14.831 95.570 65.505 1.00100.26 O
ATOM 13 C1' U B1238 15.102 93.351 64.610 1.00102.14 C
ATOM 14 N1 U B1238 15.049 92.556 63.363 1.00104.18 N
ATOM 15 C2 U B1238 14.907 93.209 62.131 1.00105.18 C
ATOM 16 O2 U B1238 14.804 94.424 62.016 1.00105.56 O
ATOM 17 N3 U B1238 14.890 92.376 61.036 1.00105.64 N
ATOM 18 C4 U B1238 14.996 90.996 61.029 1.00105.60 C
ATOM 19 O4 U B1238 14.988 90.391 59.953 1.00105.11 O
ATOM 20 C5 U B1238 15.130 90.401 62.322 1.00105.06 C
ATOM 21 C6 U B1238 15.152 91.175 63.413 1.00104.50 C
ATOM 22 P A B1239 10.605 95.044 65.974 1.00 97.27 P
ATOM 23 OP1 A B1239 10.138 96.018 66.990 1.00 97.36 O
ATOM 24 OP2 A B1239 10.086 93.652 66.003 1.00 98.22 O
ATOM 25 O5' A B1239 10.309 95.660 64.535 1.00 93.80 O
TER
Atoms:
OP1: (11.487,86.303,60.695)
OP2: (8.951,86.661,60.733)
C3': (11.024,91.029,62.311)
C1': (9.935,92.349,60.685)
C5': (11.764,89.276,60.613)
O4': (10.677,91.343,60.017)
C8: (7.932,90.775,60.691)
O2': (11.419,93.447,62.204)
C6: (5.113,92.833,60.290)
C5: (6.330,92.144,60.431)
C4: (7.485,92.900,60.415)
P: (10.302,87.098,60.310)
C4': (11.613,90.738,60.943)
C2': (10.448,92.427,62.124)
C2: (6.362,94.769,60.139)
N1: (5.164,94.173,60.141)
N3: (7.572,94.231,60.269)
N6: (3.918,92.238,60.302)
N7: (6.627,90.801,60.601)
N9: (8.516,92.012,60.597)
O5': (10.512,88.592,60.815)
O3': (12.032,90.982,63.314)
OP2: (8.951,86.661,60.733)
C3': (11.024,91.029,62.311)
C1': (9.935,92.349,60.685)
C5': (11.764,89.276,60.613)
O4': (10.677,91.343,60.017)
C8: (7.932,90.775,60.691)
O2': (11.419,93.447,62.204)
C6: (5.113,92.833,60.290)
C5: (6.330,92.144,60.431)
C4: (7.485,92.900,60.415)
P: (10.302,87.098,60.310)
C4': (11.613,90.738,60.943)
C2': (10.448,92.427,62.124)
C2: (6.362,94.769,60.139)
N1: (5.164,94.173,60.141)
N3: (7.572,94.231,60.269)
N6: (3.918,92.238,60.302)
N7: (6.627,90.801,60.601)
N9: (8.516,92.012,60.597)
O5': (10.512,88.592,60.815)
O3': (12.032,90.982,63.314)
C4: (14.996,90.996,61.029)
N3: (14.890,92.376,61.036)
OP1: (12.194,88.691,64.307)
OP2: (10.460,90.372,65.198)
C2: (14.907,93.209,62.131)
C1': (15.102,93.351,64.610)
C3': (12.950,93.995,65.364)
O5': (12.919,90.664,65.645)
O4': (14.761,92.499,65.694)
C5': (12.632,91.746,66.588)
P: (11.814,90.092,64.640)
C4': (13.526,92.951,66.317)
C2': (14.195,94.585,64.710)
O2': (14.831,95.570,65.505)
N1: (15.049,92.556,63.363)
O4: (14.988,90.391,59.953)
O2: (14.804,94.424,62.016)
C6: (15.152,91.175,63.413)
C5: (15.130,90.401,62.322)
O3': (12.212,94.994,66.079)
N3: (14.890,92.376,61.036)
OP1: (12.194,88.691,64.307)
OP2: (10.460,90.372,65.198)
C2: (14.907,93.209,62.131)
C1': (15.102,93.351,64.610)
C3': (12.950,93.995,65.364)
O5': (12.919,90.664,65.645)
O4': (14.761,92.499,65.694)
C5': (12.632,91.746,66.588)
P: (11.814,90.092,64.640)
C4': (13.526,92.951,66.317)
C2': (14.195,94.585,64.710)
O2': (14.831,95.570,65.505)
N1: (15.049,92.556,63.363)
O4: (14.988,90.391,59.953)
O2: (14.804,94.424,62.016)
C6: (15.152,91.175,63.413)
C5: (15.130,90.401,62.322)
O3': (12.212,94.994,66.079)
Image (generated by PyMOL):