Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OTJ:01237:01238
Extra
PDB:
ATOM 1 O3' C A1236 10.066 86.840 58.371 1.00 68.95 O
ATOM 2 P A A1237 10.078 86.799 59.969 1.00 70.84 P
ATOM 3 OP1 A A1237 11.248 85.985 60.372 1.00 70.22 O
ATOM 4 OP2 A A1237 8.723 86.440 60.453 1.00 71.05 O
ATOM 5 O5' A A1237 10.342 88.308 60.385 1.00 73.11 O
ATOM 6 C5' A A1237 11.613 88.934 60.136 1.00 77.18 C
ATOM 7 C4' A A1237 11.556 90.377 60.550 1.00 79.71 C
ATOM 8 O4' A A1237 10.635 91.085 59.682 1.00 79.75 O
ATOM 9 C3' A A1237 10.992 90.589 61.942 1.00 81.82 C
ATOM 10 O3' A A1237 11.991 90.408 62.931 1.00 86.15 O
ATOM 11 C2' A A1237 10.461 92.014 61.867 1.00 80.77 C
ATOM 12 O2' A A1237 11.465 92.995 62.018 1.00 81.27 O
ATOM 13 C1' A A1237 9.921 92.050 60.436 1.00 79.97 C
ATOM 14 N9 A A1237 8.506 91.706 60.376 1.00 78.98 N
ATOM 15 C8 A A1237 7.930 90.477 60.562 1.00 78.83 C
ATOM 16 N7 A A1237 6.624 90.491 60.490 1.00 78.64 N
ATOM 17 C5 A A1237 6.320 91.819 60.228 1.00 78.74 C
ATOM 18 C6 A A1237 5.100 92.496 60.057 1.00 79.02 C
ATOM 19 N6 A A1237 3.904 91.906 60.140 1.00 78.77 N
ATOM 20 N1 A A1237 5.151 93.823 59.803 1.00 79.08 N
ATOM 21 C2 A A1237 6.351 94.417 59.739 1.00 78.88 C
ATOM 22 N3 A A1237 7.561 93.890 59.894 1.00 78.61 N
ATOM 23 C4 A A1237 7.474 92.574 60.140 1.00 78.73 C
ATOM 24 P U A1238 11.611 89.722 64.333 1.00 89.58 P
ATOM 25 OP1 U A1238 11.798 88.250 64.180 1.00 88.55 O
ATOM 26 OP2 U A1238 10.292 90.257 64.771 1.00 89.53 O
ATOM 27 O5' U A1238 12.737 90.272 65.322 1.00 92.51 O
TER
ATOM 1 O3' A B1237 11.991 90.408 62.931 1.00 86.15 O
ATOM 2 P U B1238 11.611 89.722 64.333 1.00 89.58 P
ATOM 3 OP1 U B1238 11.798 88.250 64.180 1.00 88.55 O
ATOM 4 OP2 U B1238 10.292 90.257 64.771 1.00 89.53 O
ATOM 5 O5' U B1238 12.737 90.272 65.322 1.00 92.51 O
ATOM 6 C5' U B1238 12.464 91.328 66.291 1.00 96.76 C
ATOM 7 C4' U B1238 13.382 92.517 66.055 1.00 99.26 C
ATOM 8 O4' U B1238 14.621 92.038 65.461 1.00100.48 O
ATOM 9 C3' U B1238 12.857 93.567 65.081 1.00100.16 C
ATOM 10 O3' U B1238 12.089 94.561 65.766 1.00100.00 O
ATOM 11 C2' U B1238 14.138 94.160 64.505 1.00101.06 C
ATOM 12 O2' U B1238 14.737 95.113 65.364 1.00101.45 O
ATOM 13 C1' U B1238 15.037 92.921 64.433 1.00101.90 C
ATOM 14 N1 U B1238 14.988 92.190 63.154 1.00103.31 N
ATOM 15 C2 U B1238 15.098 92.917 61.976 1.00104.18 C
ATOM 16 O2 U B1238 15.212 94.135 61.951 1.00104.84 O
ATOM 17 N3 U B1238 15.069 92.163 60.827 1.00104.53 N
ATOM 18 C4 U B1238 14.939 90.790 60.731 1.00104.53 C
ATOM 19 O4 U B1238 14.959 90.254 59.619 1.00104.43 O
ATOM 20 C5 U B1238 14.818 90.113 61.988 1.00104.14 C
ATOM 21 C6 U B1238 14.847 90.816 63.126 1.00103.72 C
ATOM 22 P A B1239 10.493 94.625 65.569 1.00 99.93 P
ATOM 23 OP1 A B1239 9.954 95.550 66.600 1.00 99.70 O
ATOM 24 OP2 A B1239 9.980 93.229 65.495 1.00100.22 O
ATOM 25 O5' A B1239 10.290 95.324 64.152 1.00 98.25 O
TER
ATOM 2 P A A1237 10.078 86.799 59.969 1.00 70.84 P
ATOM 3 OP1 A A1237 11.248 85.985 60.372 1.00 70.22 O
ATOM 4 OP2 A A1237 8.723 86.440 60.453 1.00 71.05 O
ATOM 5 O5' A A1237 10.342 88.308 60.385 1.00 73.11 O
ATOM 6 C5' A A1237 11.613 88.934 60.136 1.00 77.18 C
ATOM 7 C4' A A1237 11.556 90.377 60.550 1.00 79.71 C
ATOM 8 O4' A A1237 10.635 91.085 59.682 1.00 79.75 O
ATOM 9 C3' A A1237 10.992 90.589 61.942 1.00 81.82 C
ATOM 10 O3' A A1237 11.991 90.408 62.931 1.00 86.15 O
ATOM 11 C2' A A1237 10.461 92.014 61.867 1.00 80.77 C
ATOM 12 O2' A A1237 11.465 92.995 62.018 1.00 81.27 O
ATOM 13 C1' A A1237 9.921 92.050 60.436 1.00 79.97 C
ATOM 14 N9 A A1237 8.506 91.706 60.376 1.00 78.98 N
ATOM 15 C8 A A1237 7.930 90.477 60.562 1.00 78.83 C
ATOM 16 N7 A A1237 6.624 90.491 60.490 1.00 78.64 N
ATOM 17 C5 A A1237 6.320 91.819 60.228 1.00 78.74 C
ATOM 18 C6 A A1237 5.100 92.496 60.057 1.00 79.02 C
ATOM 19 N6 A A1237 3.904 91.906 60.140 1.00 78.77 N
ATOM 20 N1 A A1237 5.151 93.823 59.803 1.00 79.08 N
ATOM 21 C2 A A1237 6.351 94.417 59.739 1.00 78.88 C
ATOM 22 N3 A A1237 7.561 93.890 59.894 1.00 78.61 N
ATOM 23 C4 A A1237 7.474 92.574 60.140 1.00 78.73 C
ATOM 24 P U A1238 11.611 89.722 64.333 1.00 89.58 P
ATOM 25 OP1 U A1238 11.798 88.250 64.180 1.00 88.55 O
ATOM 26 OP2 U A1238 10.292 90.257 64.771 1.00 89.53 O
ATOM 27 O5' U A1238 12.737 90.272 65.322 1.00 92.51 O
TER
ATOM 1 O3' A B1237 11.991 90.408 62.931 1.00 86.15 O
ATOM 2 P U B1238 11.611 89.722 64.333 1.00 89.58 P
ATOM 3 OP1 U B1238 11.798 88.250 64.180 1.00 88.55 O
ATOM 4 OP2 U B1238 10.292 90.257 64.771 1.00 89.53 O
ATOM 5 O5' U B1238 12.737 90.272 65.322 1.00 92.51 O
ATOM 6 C5' U B1238 12.464 91.328 66.291 1.00 96.76 C
ATOM 7 C4' U B1238 13.382 92.517 66.055 1.00 99.26 C
ATOM 8 O4' U B1238 14.621 92.038 65.461 1.00100.48 O
ATOM 9 C3' U B1238 12.857 93.567 65.081 1.00100.16 C
ATOM 10 O3' U B1238 12.089 94.561 65.766 1.00100.00 O
ATOM 11 C2' U B1238 14.138 94.160 64.505 1.00101.06 C
ATOM 12 O2' U B1238 14.737 95.113 65.364 1.00101.45 O
ATOM 13 C1' U B1238 15.037 92.921 64.433 1.00101.90 C
ATOM 14 N1 U B1238 14.988 92.190 63.154 1.00103.31 N
ATOM 15 C2 U B1238 15.098 92.917 61.976 1.00104.18 C
ATOM 16 O2 U B1238 15.212 94.135 61.951 1.00104.84 O
ATOM 17 N3 U B1238 15.069 92.163 60.827 1.00104.53 N
ATOM 18 C4 U B1238 14.939 90.790 60.731 1.00104.53 C
ATOM 19 O4 U B1238 14.959 90.254 59.619 1.00104.43 O
ATOM 20 C5 U B1238 14.818 90.113 61.988 1.00104.14 C
ATOM 21 C6 U B1238 14.847 90.816 63.126 1.00103.72 C
ATOM 22 P A B1239 10.493 94.625 65.569 1.00 99.93 P
ATOM 23 OP1 A B1239 9.954 95.550 66.600 1.00 99.70 O
ATOM 24 OP2 A B1239 9.980 93.229 65.495 1.00100.22 O
ATOM 25 O5' A B1239 10.290 95.324 64.152 1.00 98.25 O
TER
Atoms:
OP1: (11.248,85.985,60.372)
OP2: (8.723,86.440,60.453)
C3': (10.992,90.589,61.942)
C1': (9.921,92.050,60.436)
C5': (11.613,88.934,60.136)
O4': (10.635,91.085,59.682)
C8: (7.930,90.477,60.562)
O2': (11.465,92.995,62.018)
C6: (5.100,92.496,60.057)
C5: (6.320,91.819,60.228)
C4: (7.474,92.574,60.140)
P: (10.078,86.799,59.969)
C4': (11.556,90.377,60.550)
C2': (10.461,92.014,61.867)
C2: (6.351,94.417,59.739)
N1: (5.151,93.823,59.803)
N3: (7.561,93.890,59.894)
N6: (3.904,91.906,60.140)
N7: (6.624,90.491,60.490)
N9: (8.506,91.706,60.376)
O5': (10.342,88.308,60.385)
O3': (11.991,90.408,62.931)
OP2: (8.723,86.440,60.453)
C3': (10.992,90.589,61.942)
C1': (9.921,92.050,60.436)
C5': (11.613,88.934,60.136)
O4': (10.635,91.085,59.682)
C8: (7.930,90.477,60.562)
O2': (11.465,92.995,62.018)
C6: (5.100,92.496,60.057)
C5: (6.320,91.819,60.228)
C4: (7.474,92.574,60.140)
P: (10.078,86.799,59.969)
C4': (11.556,90.377,60.550)
C2': (10.461,92.014,61.867)
C2: (6.351,94.417,59.739)
N1: (5.151,93.823,59.803)
N3: (7.561,93.890,59.894)
N6: (3.904,91.906,60.140)
N7: (6.624,90.491,60.490)
N9: (8.506,91.706,60.376)
O5': (10.342,88.308,60.385)
O3': (11.991,90.408,62.931)
C4: (14.939,90.790,60.731)
N3: (15.069,92.163,60.827)
OP1: (11.798,88.250,64.180)
OP2: (10.292,90.257,64.771)
C2: (15.098,92.917,61.976)
C1': (15.037,92.921,64.433)
C3': (12.857,93.567,65.081)
O5': (12.737,90.272,65.322)
O4': (14.621,92.038,65.461)
C5': (12.464,91.328,66.291)
P: (11.611,89.722,64.333)
C4': (13.382,92.517,66.055)
C2': (14.138,94.160,64.505)
O2': (14.737,95.113,65.364)
N1: (14.988,92.190,63.154)
O4: (14.959,90.254,59.619)
O2: (15.212,94.135,61.951)
C6: (14.847,90.816,63.126)
C5: (14.818,90.113,61.988)
O3': (12.089,94.561,65.766)
N3: (15.069,92.163,60.827)
OP1: (11.798,88.250,64.180)
OP2: (10.292,90.257,64.771)
C2: (15.098,92.917,61.976)
C1': (15.037,92.921,64.433)
C3': (12.857,93.567,65.081)
O5': (12.737,90.272,65.322)
O4': (14.621,92.038,65.461)
C5': (12.464,91.328,66.291)
P: (11.611,89.722,64.333)
C4': (13.382,92.517,66.055)
C2': (14.138,94.160,64.505)
O2': (14.737,95.113,65.364)
N1: (14.988,92.190,63.154)
O4: (14.959,90.254,59.619)
O2: (15.212,94.135,61.951)
C6: (14.847,90.816,63.126)
C5: (14.818,90.113,61.988)
O3': (12.089,94.561,65.766)
Image (generated by PyMOL):