Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CD6:01237:01238
Extra
PDB:
ATOM 1 O3' C A1236 10.231 87.414 59.120 1.00 60.57 O
ATOM 2 P A A1237 10.334 87.442 60.714 1.00 62.37 P
ATOM 3 OP1 A A1237 11.557 86.702 61.099 1.00 61.00 O
ATOM 4 OP2 A A1237 9.027 87.049 61.288 1.00 64.28 O
ATOM 5 O5' A A1237 10.534 88.983 61.042 1.00 65.92 O
ATOM 6 C5' A A1237 11.816 89.613 60.895 1.00 69.02 C
ATOM 7 C4' A A1237 11.738 91.021 61.397 1.00 70.54 C
ATOM 8 O4' A A1237 10.832 91.763 60.548 1.00 69.76 O
ATOM 9 C3' A A1237 11.135 91.135 62.782 1.00 73.74 C
ATOM 10 O3' A A1237 12.124 90.921 63.781 1.00 82.31 O
ATOM 11 C2' A A1237 10.565 92.545 62.777 1.00 71.58 C
ATOM 12 O2' A A1237 11.531 93.547 63.008 1.00 71.57 O
ATOM 13 C1' A A1237 10.068 92.655 61.335 1.00 70.09 C
ATOM 14 N9 A A1237 8.662 92.295 61.183 1.00 69.21 N
ATOM 15 C8 A A1237 8.104 91.043 61.145 1.00 68.48 C
ATOM 16 N7 A A1237 6.802 91.050 61.025 1.00 67.59 N
ATOM 17 C5 A A1237 6.480 92.397 60.973 1.00 68.09 C
ATOM 18 C6 A A1237 5.255 93.071 60.860 1.00 69.26 C
ATOM 19 N6 A A1237 4.075 92.453 60.776 1.00 69.41 N
ATOM 20 N1 A A1237 5.282 94.421 60.837 1.00 70.27 N
ATOM 21 C2 A A1237 6.468 95.040 60.924 1.00 69.74 C
ATOM 22 N3 A A1237 7.684 94.516 61.039 1.00 68.57 N
ATOM 23 C4 A A1237 7.618 93.174 61.059 1.00 68.67 C
ATOM 24 P U A1238 11.779 90.030 65.078 1.00 88.55 P
ATOM 25 OP1 U A1238 12.605 88.792 65.002 1.00 87.61 O
ATOM 26 OP2 U A1238 10.301 89.918 65.218 1.00 88.82 O
ATOM 27 O5' U A1238 12.313 90.920 66.290 1.00 91.90 O
TER
ATOM 1 O3' A B1237 12.124 90.921 63.781 1.00 82.31 O
ATOM 2 P U B1238 11.779 90.030 65.078 1.00 88.55 P
ATOM 3 OP1 U B1238 12.605 88.792 65.002 1.00 87.61 O
ATOM 4 OP2 U B1238 10.301 89.918 65.218 1.00 88.82 O
ATOM 5 O5' U B1238 12.313 90.920 66.290 1.00 91.90 O
ATOM 6 C5' U B1238 11.889 92.296 66.432 1.00 96.48 C
ATOM 7 C4' U B1238 13.083 93.229 66.395 1.00 99.34 C
ATOM 8 O4' U B1238 14.205 92.574 65.750 1.00101.15 O
ATOM 9 C3' U B1238 12.847 94.510 65.607 1.00 99.81 C
ATOM 10 O3' U B1238 12.256 95.524 66.424 1.00 97.87 O
ATOM 11 C2' U B1238 14.252 94.875 65.131 1.00101.38 C
ATOM 12 O2' U B1238 15.012 95.566 66.105 1.00101.29 O
ATOM 13 C1' U B1238 14.877 93.488 64.902 1.00102.62 C
ATOM 14 N1 U B1238 14.891 92.905 63.543 1.00104.48 N
ATOM 15 C2 U B1238 14.728 93.725 62.420 1.00105.69 C
ATOM 16 O2 U B1238 14.564 94.937 62.479 1.00105.99 O
ATOM 17 N3 U B1238 14.766 93.060 61.215 1.00106.35 N
ATOM 18 C4 U B1238 14.946 91.703 61.010 1.00106.42 C
ATOM 19 O4 U B1238 14.945 91.257 59.860 1.00106.84 O
ATOM 20 C5 U B1238 15.105 90.935 62.205 1.00105.32 C
ATOM 21 C6 U B1238 15.074 91.541 63.394 1.00104.34 C
ATOM 22 P A B1239 10.656 95.717 66.441 1.00 97.04 P
ATOM 23 OP1 A B1239 10.351 96.770 67.443 1.00 97.54 O
ATOM 24 OP2 A B1239 10.011 94.388 66.565 1.00 97.21 O
ATOM 25 O5' A B1239 10.309 96.298 65.000 1.00 93.79 O
TER
ATOM 2 P A A1237 10.334 87.442 60.714 1.00 62.37 P
ATOM 3 OP1 A A1237 11.557 86.702 61.099 1.00 61.00 O
ATOM 4 OP2 A A1237 9.027 87.049 61.288 1.00 64.28 O
ATOM 5 O5' A A1237 10.534 88.983 61.042 1.00 65.92 O
ATOM 6 C5' A A1237 11.816 89.613 60.895 1.00 69.02 C
ATOM 7 C4' A A1237 11.738 91.021 61.397 1.00 70.54 C
ATOM 8 O4' A A1237 10.832 91.763 60.548 1.00 69.76 O
ATOM 9 C3' A A1237 11.135 91.135 62.782 1.00 73.74 C
ATOM 10 O3' A A1237 12.124 90.921 63.781 1.00 82.31 O
ATOM 11 C2' A A1237 10.565 92.545 62.777 1.00 71.58 C
ATOM 12 O2' A A1237 11.531 93.547 63.008 1.00 71.57 O
ATOM 13 C1' A A1237 10.068 92.655 61.335 1.00 70.09 C
ATOM 14 N9 A A1237 8.662 92.295 61.183 1.00 69.21 N
ATOM 15 C8 A A1237 8.104 91.043 61.145 1.00 68.48 C
ATOM 16 N7 A A1237 6.802 91.050 61.025 1.00 67.59 N
ATOM 17 C5 A A1237 6.480 92.397 60.973 1.00 68.09 C
ATOM 18 C6 A A1237 5.255 93.071 60.860 1.00 69.26 C
ATOM 19 N6 A A1237 4.075 92.453 60.776 1.00 69.41 N
ATOM 20 N1 A A1237 5.282 94.421 60.837 1.00 70.27 N
ATOM 21 C2 A A1237 6.468 95.040 60.924 1.00 69.74 C
ATOM 22 N3 A A1237 7.684 94.516 61.039 1.00 68.57 N
ATOM 23 C4 A A1237 7.618 93.174 61.059 1.00 68.67 C
ATOM 24 P U A1238 11.779 90.030 65.078 1.00 88.55 P
ATOM 25 OP1 U A1238 12.605 88.792 65.002 1.00 87.61 O
ATOM 26 OP2 U A1238 10.301 89.918 65.218 1.00 88.82 O
ATOM 27 O5' U A1238 12.313 90.920 66.290 1.00 91.90 O
TER
ATOM 1 O3' A B1237 12.124 90.921 63.781 1.00 82.31 O
ATOM 2 P U B1238 11.779 90.030 65.078 1.00 88.55 P
ATOM 3 OP1 U B1238 12.605 88.792 65.002 1.00 87.61 O
ATOM 4 OP2 U B1238 10.301 89.918 65.218 1.00 88.82 O
ATOM 5 O5' U B1238 12.313 90.920 66.290 1.00 91.90 O
ATOM 6 C5' U B1238 11.889 92.296 66.432 1.00 96.48 C
ATOM 7 C4' U B1238 13.083 93.229 66.395 1.00 99.34 C
ATOM 8 O4' U B1238 14.205 92.574 65.750 1.00101.15 O
ATOM 9 C3' U B1238 12.847 94.510 65.607 1.00 99.81 C
ATOM 10 O3' U B1238 12.256 95.524 66.424 1.00 97.87 O
ATOM 11 C2' U B1238 14.252 94.875 65.131 1.00101.38 C
ATOM 12 O2' U B1238 15.012 95.566 66.105 1.00101.29 O
ATOM 13 C1' U B1238 14.877 93.488 64.902 1.00102.62 C
ATOM 14 N1 U B1238 14.891 92.905 63.543 1.00104.48 N
ATOM 15 C2 U B1238 14.728 93.725 62.420 1.00105.69 C
ATOM 16 O2 U B1238 14.564 94.937 62.479 1.00105.99 O
ATOM 17 N3 U B1238 14.766 93.060 61.215 1.00106.35 N
ATOM 18 C4 U B1238 14.946 91.703 61.010 1.00106.42 C
ATOM 19 O4 U B1238 14.945 91.257 59.860 1.00106.84 O
ATOM 20 C5 U B1238 15.105 90.935 62.205 1.00105.32 C
ATOM 21 C6 U B1238 15.074 91.541 63.394 1.00104.34 C
ATOM 22 P A B1239 10.656 95.717 66.441 1.00 97.04 P
ATOM 23 OP1 A B1239 10.351 96.770 67.443 1.00 97.54 O
ATOM 24 OP2 A B1239 10.011 94.388 66.565 1.00 97.21 O
ATOM 25 O5' A B1239 10.309 96.298 65.000 1.00 93.79 O
TER
Atoms:
OP1: (11.557,86.702,61.099)
OP2: (9.027,87.049,61.288)
C3': (11.135,91.135,62.782)
C1': (10.068,92.655,61.335)
C5': (11.816,89.613,60.895)
O4': (10.832,91.763,60.548)
C8: (8.104,91.043,61.145)
O2': (11.531,93.547,63.008)
C6: (5.255,93.071,60.860)
C5: (6.480,92.397,60.973)
C4: (7.618,93.174,61.059)
P: (10.334,87.442,60.714)
C4': (11.738,91.021,61.397)
C2': (10.565,92.545,62.777)
C2: (6.468,95.040,60.924)
N1: (5.282,94.421,60.837)
N3: (7.684,94.516,61.039)
N6: (4.075,92.453,60.776)
N7: (6.802,91.050,61.025)
N9: (8.662,92.295,61.183)
O5': (10.534,88.983,61.042)
O3': (12.124,90.921,63.781)
OP2: (9.027,87.049,61.288)
C3': (11.135,91.135,62.782)
C1': (10.068,92.655,61.335)
C5': (11.816,89.613,60.895)
O4': (10.832,91.763,60.548)
C8: (8.104,91.043,61.145)
O2': (11.531,93.547,63.008)
C6: (5.255,93.071,60.860)
C5: (6.480,92.397,60.973)
C4: (7.618,93.174,61.059)
P: (10.334,87.442,60.714)
C4': (11.738,91.021,61.397)
C2': (10.565,92.545,62.777)
C2: (6.468,95.040,60.924)
N1: (5.282,94.421,60.837)
N3: (7.684,94.516,61.039)
N6: (4.075,92.453,60.776)
N7: (6.802,91.050,61.025)
N9: (8.662,92.295,61.183)
O5': (10.534,88.983,61.042)
O3': (12.124,90.921,63.781)
C4: (14.946,91.703,61.010)
N3: (14.766,93.060,61.215)
OP1: (12.605,88.792,65.002)
OP2: (10.301,89.918,65.218)
C2: (14.728,93.725,62.420)
C1': (14.877,93.488,64.902)
C3': (12.847,94.510,65.607)
O5': (12.313,90.920,66.290)
O4': (14.205,92.574,65.750)
C5': (11.889,92.296,66.432)
P: (11.779,90.030,65.078)
C4': (13.083,93.229,66.395)
C2': (14.252,94.875,65.131)
O2': (15.012,95.566,66.105)
N1: (14.891,92.905,63.543)
O4: (14.945,91.257,59.860)
O2: (14.564,94.937,62.479)
C6: (15.074,91.541,63.394)
C5: (15.105,90.935,62.205)
O3': (12.256,95.524,66.424)
N3: (14.766,93.060,61.215)
OP1: (12.605,88.792,65.002)
OP2: (10.301,89.918,65.218)
C2: (14.728,93.725,62.420)
C1': (14.877,93.488,64.902)
C3': (12.847,94.510,65.607)
O5': (12.313,90.920,66.290)
O4': (14.205,92.574,65.750)
C5': (11.889,92.296,66.432)
P: (11.779,90.030,65.078)
C4': (13.083,93.229,66.395)
C2': (14.252,94.875,65.131)
O2': (15.012,95.566,66.105)
N1: (14.891,92.905,63.543)
O4: (14.945,91.257,59.860)
O2: (14.564,94.937,62.479)
C6: (15.074,91.541,63.394)
C5: (15.105,90.935,62.205)
O3': (12.256,95.524,66.424)
Image (generated by PyMOL):