ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCE:01237:01238

Extra

PDB:
ATOM 1 O3' C A1236 10.152 86.908 58.798 1.00 55.38 O
ATOM 2 P A A1237 10.142 86.841 60.395 1.00 56.08 P
ATOM 3 OP1 A A1237 11.297 86.015 60.807 1.00 56.23 O
ATOM 4 OP2 A A1237 8.780 86.481 60.852 1.00 57.71 O
ATOM 5 O5' A A1237 10.425 88.342 60.832 1.00 60.52 O
ATOM 6 C5' A A1237 11.724 88.929 60.648 1.00 65.27 C
ATOM 7 C4' A A1237 11.674 90.389 60.994 1.00 67.50 C
ATOM 8 O4' A A1237 10.754 91.047 60.092 1.00 67.47 O
ATOM 9 C3' A A1237 11.124 90.673 62.378 1.00 70.36 C
ATOM 10 O3' A A1237 12.157 90.588 63.349 1.00 76.64 O
ATOM 11 C2' A A1237 10.569 92.082 62.228 1.00 68.74 C
ATOM 12 O2' A A1237 11.569 93.075 62.325 1.00 68.30 O
ATOM 13 C1' A A1237 10.029 92.039 60.795 1.00 68.31 C
ATOM 14 N9 A A1237 8.615 91.695 60.710 1.00 67.68 N
ATOM 15 C8 A A1237 8.051 90.448 60.769 1.00 67.92 C
ATOM 16 N7 A A1237 6.746 90.455 60.673 1.00 68.18 N
ATOM 17 C5 A A1237 6.430 91.798 60.538 1.00 68.55 C
ATOM 18 C6 A A1237 5.205 92.471 60.400 1.00 69.68 C
ATOM 19 N6 A A1237 4.021 91.856 60.377 1.00 69.46 N
ATOM 20 N1 A A1237 5.238 93.817 60.289 1.00 70.42 N
ATOM 21 C2 A A1237 6.427 94.432 60.319 1.00 70.28 C
ATOM 22 N3 A A1237 7.644 93.908 60.447 1.00 69.22 N
ATOM 23 C4 A A1237 7.573 92.571 60.554 1.00 68.28 C
ATOM 24 P U A1238 11.937 89.719 64.684 1.00 82.27 P
ATOM 25 OP1 U A1238 12.063 88.286 64.302 1.00 80.53 O
ATOM 26 OP2 U A1238 10.696 90.195 65.356 1.00 81.04 O
ATOM 27 O5' U A1238 13.195 90.108 65.590 1.00 86.92 O
TER

ATOM 1 O3' A B1237 12.157 90.588 63.349 1.00 76.64 O
ATOM 2 P U B1238 11.937 89.719 64.684 1.00 82.27 P
ATOM 3 OP1 U B1238 12.063 88.286 64.302 1.00 80.53 O
ATOM 4 OP2 U B1238 10.696 90.195 65.356 1.00 81.04 O
ATOM 5 O5' U B1238 13.195 90.108 65.590 1.00 86.92 O
ATOM 6 C5' U B1238 13.164 91.242 66.511 1.00 93.45 C
ATOM 7 C4' U B1238 13.963 92.411 65.954 1.00 96.64 C
ATOM 8 O4' U B1238 15.015 91.887 65.100 1.00 98.43 O
ATOM 9 C3' U B1238 13.175 93.379 65.076 1.00 98.14 C
ATOM 10 O3' U B1238 12.645 94.450 65.867 1.00 98.41 O
ATOM 11 C2' U B1238 14.231 93.912 64.113 1.00 99.37 C
ATOM 12 O2' U B1238 14.983 94.977 64.664 1.00100.20 O
ATOM 13 C1' U B1238 15.144 92.693 63.941 1.00100.13 C
ATOM 14 N1 U B1238 14.911 91.843 62.759 1.00101.55 N
ATOM 15 C2 U B1238 14.622 92.452 61.542 1.00102.51 C
ATOM 16 O2 U B1238 14.496 93.660 61.409 1.00102.35 O
ATOM 17 N3 U B1238 14.479 91.586 60.483 1.00103.62 N
ATOM 18 C4 U B1238 14.582 90.205 60.513 1.00104.12 C
ATOM 19 O4 U B1238 14.490 89.565 59.460 1.00103.68 O
ATOM 20 C5 U B1238 14.850 89.654 61.807 1.00102.98 C
ATOM 21 C6 U B1238 15.002 90.468 62.856 1.00101.65 C
ATOM 22 P A B1239 11.062 94.554 66.137 1.00 99.10 P
ATOM 23 OP1 A B1239 10.855 95.581 67.188 1.00 99.19 O
ATOM 24 OP2 A B1239 10.543 93.176 66.349 1.00 99.83 O
ATOM 25 O5' A B1239 10.458 95.134 64.782 1.00 95.58 O
TER

Atoms:
OP1: (11.297,86.015,60.807)
OP2: (8.780,86.481,60.852)
C3': (11.124,90.673,62.378)
C1': (10.029,92.039,60.795)
C5': (11.724,88.929,60.648)
O4': (10.754,91.047,60.092)
C8: (8.051,90.448,60.769)
O2': (11.569,93.075,62.325)
C6: (5.205,92.471,60.400)
C5: (6.430,91.798,60.538)
C4: (7.573,92.571,60.554)
P: (10.142,86.841,60.395)
C4': (11.674,90.389,60.994)
C2': (10.569,92.082,62.228)
C2: (6.427,94.432,60.319)
N1: (5.238,93.817,60.289)
N3: (7.644,93.908,60.447)
N6: (4.021,91.856,60.377)
N7: (6.746,90.455,60.673)
N9: (8.615,91.695,60.710)
O5': (10.425,88.342,60.832)
O3': (12.157,90.588,63.349)
C4: (14.582,90.205,60.513)
N3: (14.479,91.586,60.483)
OP1: (12.063,88.286,64.302)
OP2: (10.696,90.195,65.356)
C2: (14.622,92.452,61.542)
C1': (15.144,92.693,63.941)
C3': (13.175,93.379,65.076)
O5': (13.195,90.108,65.590)
O4': (15.015,91.887,65.100)
C5': (13.164,91.242,66.511)
P: (11.937,89.719,64.684)
C4': (13.963,92.411,65.954)
C2': (14.231,93.912,64.113)
O2': (14.983,94.977,64.664)
N1: (14.911,91.843,62.759)
O4: (14.490,89.565,59.460)
O2: (14.496,93.660,61.409)
C6: (15.002,90.468,62.856)
C5: (14.850,89.654,61.807)
O3': (12.645,94.450,65.867)
Image (generated by PyMOL):
PyMOL image
show in jmol