ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCM:01237:01238

Extra

PDB:
ATOM 1 O3' C A1236 10.240 86.258 58.281 1.00 47.91 O
ATOM 2 P A A1237 10.274 86.198 59.882 1.00 47.62 P
ATOM 3 OP1 A A1237 11.443 85.376 60.266 1.00 47.99 O
ATOM 4 OP2 A A1237 8.923 85.826 60.367 1.00 50.91 O
ATOM 5 O5' A A1237 10.547 87.700 60.317 1.00 50.01 O
ATOM 6 C5' A A1237 11.867 88.258 60.256 1.00 55.80 C
ATOM 7 C4' A A1237 11.830 89.690 60.711 1.00 59.08 C
ATOM 8 O4' A A1237 10.980 90.436 59.805 1.00 58.93 O
ATOM 9 C3' A A1237 11.196 89.883 62.077 1.00 61.71 C
ATOM 10 O3' A A1237 12.148 89.677 63.116 1.00 67.11 O
ATOM 11 C2' A A1237 10.668 91.308 61.995 1.00 60.05 C
ATOM 12 O2' A A1237 11.667 92.284 62.199 1.00 60.31 O
ATOM 13 C1' A A1237 10.207 91.369 60.536 1.00 58.82 C
ATOM 14 N9 A A1237 8.805 91.012 60.351 1.00 56.91 N
ATOM 15 C8 A A1237 8.241 89.769 60.460 1.00 56.74 C
ATOM 16 N7 A A1237 6.950 89.754 60.245 1.00 56.10 N
ATOM 17 C5 A A1237 6.644 91.078 59.974 1.00 55.72 C
ATOM 18 C6 A A1237 5.439 91.720 59.668 1.00 56.66 C
ATOM 19 N6 A A1237 4.263 91.092 59.594 1.00 55.23 N
ATOM 20 N1 A A1237 5.479 93.051 59.443 1.00 57.10 N
ATOM 21 C2 A A1237 6.659 93.680 59.532 1.00 56.96 C
ATOM 22 N3 A A1237 7.858 93.185 59.819 1.00 56.09 N
ATOM 23 C4 A A1237 7.780 91.863 60.031 1.00 56.12 C
ATOM 24 P U A1238 11.706 88.931 64.470 1.00 71.53 P
ATOM 25 OP1 U A1238 12.617 87.775 64.654 1.00 70.96 O
ATOM 26 OP2 U A1238 10.238 88.708 64.435 1.00 72.47 O
ATOM 27 O5' U A1238 12.015 90.008 65.603 1.00 76.57 O
TER

ATOM 1 O3' A B1237 12.148 89.677 63.116 1.00 67.11 O
ATOM 2 P U B1238 11.706 88.931 64.470 1.00 71.53 P
ATOM 3 OP1 U B1238 12.617 87.775 64.654 1.00 70.96 O
ATOM 4 OP2 U B1238 10.238 88.708 64.435 1.00 72.47 O
ATOM 5 O5' U B1238 12.015 90.008 65.603 1.00 76.57 O
ATOM 6 C5' U B1238 11.646 91.391 65.413 1.00 83.93 C
ATOM 7 C4' U B1238 12.876 92.281 65.417 1.00 88.35 C
ATOM 8 O4' U B1238 14.034 91.544 64.939 1.00 90.56 O
ATOM 9 C3' U B1238 12.764 93.491 64.500 1.00 89.55 C
ATOM 10 O3' U B1238 12.116 94.588 65.145 1.00 88.84 O
ATOM 11 C2' U B1238 14.224 93.789 64.169 1.00 91.27 C
ATOM 12 O2' U B1238 14.877 94.515 65.191 1.00 92.54 O
ATOM 13 C1' U B1238 14.822 92.377 64.105 1.00 92.36 C
ATOM 14 N1 U B1238 14.900 91.735 62.780 1.00 95.05 N
ATOM 15 C2 U B1238 14.690 92.501 61.632 1.00 96.62 C
ATOM 16 O2 U B1238 14.451 93.700 61.655 1.00 97.47 O
ATOM 17 N3 U B1238 14.772 91.802 60.450 1.00 97.15 N
ATOM 18 C4 U B1238 15.039 90.452 60.292 1.00 97.41 C
ATOM 19 O4 U B1238 15.053 89.963 59.157 1.00 96.68 O
ATOM 20 C5 U B1238 15.251 89.738 61.516 1.00 96.72 C
ATOM 21 C6 U B1238 15.177 90.386 62.685 1.00 95.63 C
ATOM 22 P A B1239 10.514 94.740 65.063 1.00 88.48 P
ATOM 23 OP1 A B1239 10.140 95.877 65.944 1.00 88.30 O
ATOM 24 OP2 A B1239 9.893 93.408 65.285 1.00 88.73 O
ATOM 25 O5' A B1239 10.221 95.182 63.562 1.00 85.80 O
TER

Atoms:
OP1: (11.443,85.376,60.266)
OP2: (8.923,85.826,60.367)
C3': (11.196,89.883,62.077)
C1': (10.207,91.369,60.536)
C5': (11.867,88.258,60.256)
O4': (10.980,90.436,59.805)
C8: (8.241,89.769,60.460)
O2': (11.667,92.284,62.199)
C6: (5.439,91.720,59.668)
C5: (6.644,91.078,59.974)
C4: (7.780,91.863,60.031)
P: (10.274,86.198,59.882)
C4': (11.830,89.690,60.711)
C2': (10.668,91.308,61.995)
C2: (6.659,93.680,59.532)
N1: (5.479,93.051,59.443)
N3: (7.858,93.185,59.819)
N6: (4.263,91.092,59.594)
N7: (6.950,89.754,60.245)
N9: (8.805,91.012,60.351)
O5': (10.547,87.700,60.317)
O3': (12.148,89.677,63.116)
C4: (15.039,90.452,60.292)
N3: (14.772,91.802,60.450)
OP1: (12.617,87.775,64.654)
OP2: (10.238,88.708,64.435)
C2: (14.690,92.501,61.632)
C1': (14.822,92.377,64.105)
C3': (12.764,93.491,64.500)
O5': (12.015,90.008,65.603)
O4': (14.034,91.544,64.939)
C5': (11.646,91.391,65.413)
P: (11.706,88.931,64.470)
C4': (12.876,92.281,65.417)
C2': (14.224,93.789,64.169)
O2': (14.877,94.515,65.191)
N1: (14.900,91.735,62.780)
O4: (15.053,89.963,59.157)
O2: (14.451,93.700,61.655)
C6: (15.177,90.386,62.685)
C5: (15.251,89.738,61.516)
O3': (12.116,94.588,65.145)
Image (generated by PyMOL):
PyMOL image
show in jmol