Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:01852:01898
Extra
PDB:
ATOM 1 O3' C A1851 118.997 102.233 87.906 1.00 59.63 O
ATOM 2 P C A1852 119.704 102.261 86.460 1.00 60.66 P
ATOM 3 OP1 C A1852 120.135 100.864 86.174 1.00 59.62 O
ATOM 4 OP2 C A1852 120.711 103.353 86.428 1.00 60.64 O
ATOM 5 O5' C A1852 118.523 102.643 85.462 1.00 59.43 O
ATOM 6 C5' C A1852 117.326 101.843 85.400 1.00 59.38 C
ATOM 7 C4' C A1852 116.930 101.601 83.964 1.00 59.00 C
ATOM 8 O4' C A1852 116.395 102.825 83.389 1.00 57.77 O
ATOM 9 C3' C A1852 118.061 101.157 83.039 1.00 58.94 C
ATOM 10 O3' C A1852 117.531 100.309 82.025 1.00 61.93 O
ATOM 11 C2' C A1852 118.475 102.472 82.385 1.00 58.40 C
ATOM 12 O2' C A1852 119.117 102.279 81.144 1.00 56.89 O
ATOM 13 C1' C A1852 117.107 103.131 82.206 1.00 57.74 C
ATOM 14 N1 C A1852 117.035 104.589 81.980 1.00 56.98 N
ATOM 15 C2 C A1852 115.883 105.105 81.365 1.00 55.00 C
ATOM 16 O2 C A1852 114.997 104.323 80.999 1.00 53.86 O
ATOM 17 N3 C A1852 115.763 106.437 81.190 1.00 53.68 N
ATOM 18 C4 C A1852 116.731 107.252 81.598 1.00 55.19 C
ATOM 19 N4 C A1852 116.545 108.561 81.434 1.00 53.85 N
ATOM 20 C5 C A1852 117.930 106.761 82.201 1.00 56.14 C
ATOM 21 C6 C A1852 118.041 105.433 82.369 1.00 56.38 C
ATOM 22 P A A1853 117.759 98.721 82.101 1.00 62.29 P
ATOM 23 OP1 A A1853 118.855 98.424 83.061 1.00 63.60 O
ATOM 24 OP2 A A1853 117.873 98.265 80.695 1.00 62.68 O
ATOM 25 O5' A A1853 116.392 98.155 82.702 1.00 62.08 O
TER
ATOM 1 O3' U B1897 120.203 110.987 80.464 1.00 51.95 O
ATOM 2 P C B1898 119.887 110.961 82.043 1.00 50.40 P
ATOM 3 OP1 C B1898 120.408 112.244 82.589 1.00 52.60 O
ATOM 4 OP2 C B1898 120.337 109.675 82.630 1.00 48.85 O
ATOM 5 O5' C B1898 118.301 111.006 82.129 1.00 49.83 O
ATOM 6 C5' C B1898 117.570 112.126 81.606 1.00 50.21 C
ATOM 7 C4' C B1898 116.427 112.464 82.526 1.00 49.84 C
ATOM 8 O4' C B1898 115.591 111.292 82.666 1.00 51.35 O
ATOM 9 C3' C B1898 116.811 112.857 83.944 1.00 48.67 C
ATOM 10 O3' C B1898 117.021 114.267 83.986 1.00 50.28 O
ATOM 11 C2' C B1898 115.581 112.448 84.748 1.00 48.44 C
ATOM 12 O2' C B1898 114.559 113.418 84.658 1.00 46.27 O
ATOM 13 C1' C B1898 115.131 111.188 83.998 1.00 48.66 C
ATOM 14 N1 C B1898 115.582 109.882 84.504 1.00 48.72 N
ATOM 15 C2 C B1898 114.698 108.806 84.430 1.00 49.20 C
ATOM 16 O2 C B1898 113.551 109.001 84.011 1.00 49.26 O
ATOM 17 N3 C B1898 115.112 107.581 84.814 1.00 51.85 N
ATOM 18 C4 C B1898 116.355 107.408 85.266 1.00 51.45 C
ATOM 19 N4 C B1898 116.727 106.173 85.604 1.00 52.79 N
ATOM 20 C5 C B1898 117.270 108.491 85.383 1.00 49.97 C
ATOM 21 C6 C B1898 116.843 109.702 85.000 1.00 49.36 C
ATOM 22 P A B1899 117.661 114.963 85.293 1.00 51.21 P
ATOM 23 OP1 A B1899 119.088 115.266 84.986 1.00 50.41 O
ATOM 24 OP2 A B1899 117.322 114.175 86.501 1.00 48.05 O
ATOM 25 O5' A B1899 116.904 116.363 85.360 1.00 48.22 O
TER
ATOM 2 P C A1852 119.704 102.261 86.460 1.00 60.66 P
ATOM 3 OP1 C A1852 120.135 100.864 86.174 1.00 59.62 O
ATOM 4 OP2 C A1852 120.711 103.353 86.428 1.00 60.64 O
ATOM 5 O5' C A1852 118.523 102.643 85.462 1.00 59.43 O
ATOM 6 C5' C A1852 117.326 101.843 85.400 1.00 59.38 C
ATOM 7 C4' C A1852 116.930 101.601 83.964 1.00 59.00 C
ATOM 8 O4' C A1852 116.395 102.825 83.389 1.00 57.77 O
ATOM 9 C3' C A1852 118.061 101.157 83.039 1.00 58.94 C
ATOM 10 O3' C A1852 117.531 100.309 82.025 1.00 61.93 O
ATOM 11 C2' C A1852 118.475 102.472 82.385 1.00 58.40 C
ATOM 12 O2' C A1852 119.117 102.279 81.144 1.00 56.89 O
ATOM 13 C1' C A1852 117.107 103.131 82.206 1.00 57.74 C
ATOM 14 N1 C A1852 117.035 104.589 81.980 1.00 56.98 N
ATOM 15 C2 C A1852 115.883 105.105 81.365 1.00 55.00 C
ATOM 16 O2 C A1852 114.997 104.323 80.999 1.00 53.86 O
ATOM 17 N3 C A1852 115.763 106.437 81.190 1.00 53.68 N
ATOM 18 C4 C A1852 116.731 107.252 81.598 1.00 55.19 C
ATOM 19 N4 C A1852 116.545 108.561 81.434 1.00 53.85 N
ATOM 20 C5 C A1852 117.930 106.761 82.201 1.00 56.14 C
ATOM 21 C6 C A1852 118.041 105.433 82.369 1.00 56.38 C
ATOM 22 P A A1853 117.759 98.721 82.101 1.00 62.29 P
ATOM 23 OP1 A A1853 118.855 98.424 83.061 1.00 63.60 O
ATOM 24 OP2 A A1853 117.873 98.265 80.695 1.00 62.68 O
ATOM 25 O5' A A1853 116.392 98.155 82.702 1.00 62.08 O
TER
ATOM 1 O3' U B1897 120.203 110.987 80.464 1.00 51.95 O
ATOM 2 P C B1898 119.887 110.961 82.043 1.00 50.40 P
ATOM 3 OP1 C B1898 120.408 112.244 82.589 1.00 52.60 O
ATOM 4 OP2 C B1898 120.337 109.675 82.630 1.00 48.85 O
ATOM 5 O5' C B1898 118.301 111.006 82.129 1.00 49.83 O
ATOM 6 C5' C B1898 117.570 112.126 81.606 1.00 50.21 C
ATOM 7 C4' C B1898 116.427 112.464 82.526 1.00 49.84 C
ATOM 8 O4' C B1898 115.591 111.292 82.666 1.00 51.35 O
ATOM 9 C3' C B1898 116.811 112.857 83.944 1.00 48.67 C
ATOM 10 O3' C B1898 117.021 114.267 83.986 1.00 50.28 O
ATOM 11 C2' C B1898 115.581 112.448 84.748 1.00 48.44 C
ATOM 12 O2' C B1898 114.559 113.418 84.658 1.00 46.27 O
ATOM 13 C1' C B1898 115.131 111.188 83.998 1.00 48.66 C
ATOM 14 N1 C B1898 115.582 109.882 84.504 1.00 48.72 N
ATOM 15 C2 C B1898 114.698 108.806 84.430 1.00 49.20 C
ATOM 16 O2 C B1898 113.551 109.001 84.011 1.00 49.26 O
ATOM 17 N3 C B1898 115.112 107.581 84.814 1.00 51.85 N
ATOM 18 C4 C B1898 116.355 107.408 85.266 1.00 51.45 C
ATOM 19 N4 C B1898 116.727 106.173 85.604 1.00 52.79 N
ATOM 20 C5 C B1898 117.270 108.491 85.383 1.00 49.97 C
ATOM 21 C6 C B1898 116.843 109.702 85.000 1.00 49.36 C
ATOM 22 P A B1899 117.661 114.963 85.293 1.00 51.21 P
ATOM 23 OP1 A B1899 119.088 115.266 84.986 1.00 50.41 O
ATOM 24 OP2 A B1899 117.322 114.175 86.501 1.00 48.05 O
ATOM 25 O5' A B1899 116.904 116.363 85.360 1.00 48.22 O
TER
Atoms:
C2: (115.883,105.105,81.365)
OP1: (120.135,100.864,86.174)
OP2: (120.711,103.353,86.428)
C4: (116.731,107.252,81.598)
O5': (118.523,102.643,85.462)
C3': (118.061,101.157,83.039)
C1': (117.107,103.131,82.206)
O4': (116.395,102.825,83.389)
C5': (117.326,101.843,85.400)
P: (119.704,102.261,86.460)
O2: (114.997,104.323,80.999)
C4': (116.930,101.601,83.964)
C2': (118.475,102.472,82.385)
O2': (119.117,102.279,81.144)
N1: (117.035,104.589,81.980)
N3: (115.763,106.437,81.190)
N4: (116.545,108.561,81.434)
C6: (118.041,105.433,82.369)
C5: (117.930,106.761,82.201)
O3': (117.531,100.309,82.025)
OP1: (120.135,100.864,86.174)
OP2: (120.711,103.353,86.428)
C4: (116.731,107.252,81.598)
O5': (118.523,102.643,85.462)
C3': (118.061,101.157,83.039)
C1': (117.107,103.131,82.206)
O4': (116.395,102.825,83.389)
C5': (117.326,101.843,85.400)
P: (119.704,102.261,86.460)
O2: (114.997,104.323,80.999)
C4': (116.930,101.601,83.964)
C2': (118.475,102.472,82.385)
O2': (119.117,102.279,81.144)
N1: (117.035,104.589,81.980)
N3: (115.763,106.437,81.190)
N4: (116.545,108.561,81.434)
C6: (118.041,105.433,82.369)
C5: (117.930,106.761,82.201)
O3': (117.531,100.309,82.025)
C2: (114.698,108.806,84.430)
OP1: (120.408,112.244,82.589)
OP2: (120.337,109.675,82.630)
C4: (116.355,107.408,85.266)
O5': (118.301,111.006,82.129)
C3': (116.811,112.857,83.944)
C1': (115.131,111.188,83.998)
O4': (115.591,111.292,82.666)
C5': (117.570,112.126,81.606)
P: (119.887,110.961,82.043)
O2: (113.551,109.001,84.011)
C4': (116.427,112.464,82.526)
C2': (115.581,112.448,84.748)
O2': (114.559,113.418,84.658)
N1: (115.582,109.882,84.504)
N3: (115.112,107.581,84.814)
N4: (116.727,106.173,85.604)
C6: (116.843,109.702,85.000)
C5: (117.270,108.491,85.383)
O3': (117.021,114.267,83.986)
OP1: (120.408,112.244,82.589)
OP2: (120.337,109.675,82.630)
C4: (116.355,107.408,85.266)
O5': (118.301,111.006,82.129)
C3': (116.811,112.857,83.944)
C1': (115.131,111.188,83.998)
O4': (115.591,111.292,82.666)
C5': (117.570,112.126,81.606)
P: (119.887,110.961,82.043)
O2: (113.551,109.001,84.011)
C4': (116.427,112.464,82.526)
C2': (115.581,112.448,84.748)
O2': (114.559,113.418,84.658)
N1: (115.582,109.882,84.504)
N3: (115.112,107.581,84.814)
N4: (116.727,106.173,85.604)
C6: (116.843,109.702,85.000)
C5: (117.270,108.491,85.383)
O3': (117.021,114.267,83.986)
Image (generated by PyMOL):