Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:01852:01898
Extra
PDB:
ATOM 1 O3' C A1851 119.410 103.139 88.453 1.00 52.81 O
ATOM 2 P C A1852 120.050 103.141 86.976 1.00 55.48 P
ATOM 3 OP1 C A1852 120.453 101.740 86.680 1.00 54.52 O
ATOM 4 OP2 C A1852 121.059 104.233 86.870 1.00 53.93 O
ATOM 5 O5' C A1852 118.832 103.507 86.020 1.00 55.59 O
ATOM 6 C5' C A1852 117.670 102.675 85.974 1.00 55.78 C
ATOM 7 C4' C A1852 117.234 102.464 84.548 1.00 55.97 C
ATOM 8 O4' C A1852 116.696 103.704 84.016 1.00 56.58 O
ATOM 9 C3' C A1852 118.314 102.016 83.569 1.00 56.84 C
ATOM 10 O3' C A1852 117.723 101.148 82.614 1.00 59.02 O
ATOM 11 C2' C A1852 118.692 103.317 82.868 1.00 56.55 C
ATOM 12 O2' C A1852 119.195 103.110 81.563 1.00 55.77 O
ATOM 13 C1' C A1852 117.332 104.002 82.794 1.00 56.35 C
ATOM 14 N1 C A1852 117.314 105.461 82.597 1.00 55.91 N
ATOM 15 C2 C A1852 116.225 106.026 81.924 1.00 54.90 C
ATOM 16 O2 C A1852 115.322 105.281 81.502 1.00 54.72 O
ATOM 17 N3 C A1852 116.181 107.365 81.750 1.00 53.78 N
ATOM 18 C4 C A1852 117.163 108.133 82.217 1.00 52.85 C
ATOM 19 N4 C A1852 117.063 109.446 82.039 1.00 52.48 N
ATOM 20 C5 C A1852 118.289 107.587 82.893 1.00 54.78 C
ATOM 21 C6 C A1852 118.324 106.258 83.062 1.00 56.04 C
ATOM 22 P A A1853 117.948 99.566 82.732 1.00 60.87 P
ATOM 23 OP1 A A1853 119.021 99.320 83.736 1.00 59.48 O
ATOM 24 OP2 A A1853 118.090 99.040 81.343 1.00 58.07 O
ATOM 25 O5' A A1853 116.579 99.023 83.334 1.00 59.25 O
TER
ATOM 1 O3' U B1897 120.459 111.902 81.022 1.00 46.46 O
ATOM 2 P C B1898 120.117 111.907 82.585 1.00 48.48 P
ATOM 3 OP1 C B1898 120.631 113.180 83.157 1.00 50.03 O
ATOM 4 OP2 C B1898 120.533 110.611 83.179 1.00 47.70 O
ATOM 5 O5' C B1898 118.530 111.961 82.615 1.00 50.01 O
ATOM 6 C5' C B1898 117.815 113.106 82.120 1.00 49.59 C
ATOM 7 C4' C B1898 116.654 113.400 83.031 1.00 49.75 C
ATOM 8 O4' C B1898 115.854 112.199 83.145 1.00 50.63 O
ATOM 9 C3' C B1898 117.044 113.750 84.458 1.00 49.70 C
ATOM 10 O3' C B1898 117.242 115.159 84.547 1.00 50.13 O
ATOM 11 C2' C B1898 115.829 113.299 85.258 1.00 49.50 C
ATOM 12 O2' C B1898 114.794 114.255 85.223 1.00 48.49 O
ATOM 13 C1' C B1898 115.381 112.066 84.469 1.00 50.38 C
ATOM 14 N1 C B1898 115.810 110.749 84.964 1.00 51.37 N
ATOM 15 C2 C B1898 114.897 109.698 84.922 1.00 53.13 C
ATOM 16 O2 C B1898 113.746 109.920 84.517 1.00 53.96 O
ATOM 17 N3 C B1898 115.285 108.466 85.326 1.00 53.66 N
ATOM 18 C4 C B1898 116.525 108.271 85.770 1.00 52.25 C
ATOM 19 N4 C B1898 116.865 107.041 86.145 1.00 53.72 N
ATOM 20 C5 C B1898 117.471 109.329 85.845 1.00 52.13 C
ATOM 21 C6 C B1898 117.076 110.541 85.437 1.00 52.66 C
ATOM 22 P A B1899 118.046 115.792 85.785 1.00 49.11 P
ATOM 23 OP1 A B1899 119.446 115.973 85.324 1.00 52.39 O
ATOM 24 OP2 A B1899 117.773 115.028 87.029 1.00 47.38 O
ATOM 25 O5' A B1899 117.389 117.231 85.937 1.00 48.35 O
TER
ATOM 2 P C A1852 120.050 103.141 86.976 1.00 55.48 P
ATOM 3 OP1 C A1852 120.453 101.740 86.680 1.00 54.52 O
ATOM 4 OP2 C A1852 121.059 104.233 86.870 1.00 53.93 O
ATOM 5 O5' C A1852 118.832 103.507 86.020 1.00 55.59 O
ATOM 6 C5' C A1852 117.670 102.675 85.974 1.00 55.78 C
ATOM 7 C4' C A1852 117.234 102.464 84.548 1.00 55.97 C
ATOM 8 O4' C A1852 116.696 103.704 84.016 1.00 56.58 O
ATOM 9 C3' C A1852 118.314 102.016 83.569 1.00 56.84 C
ATOM 10 O3' C A1852 117.723 101.148 82.614 1.00 59.02 O
ATOM 11 C2' C A1852 118.692 103.317 82.868 1.00 56.55 C
ATOM 12 O2' C A1852 119.195 103.110 81.563 1.00 55.77 O
ATOM 13 C1' C A1852 117.332 104.002 82.794 1.00 56.35 C
ATOM 14 N1 C A1852 117.314 105.461 82.597 1.00 55.91 N
ATOM 15 C2 C A1852 116.225 106.026 81.924 1.00 54.90 C
ATOM 16 O2 C A1852 115.322 105.281 81.502 1.00 54.72 O
ATOM 17 N3 C A1852 116.181 107.365 81.750 1.00 53.78 N
ATOM 18 C4 C A1852 117.163 108.133 82.217 1.00 52.85 C
ATOM 19 N4 C A1852 117.063 109.446 82.039 1.00 52.48 N
ATOM 20 C5 C A1852 118.289 107.587 82.893 1.00 54.78 C
ATOM 21 C6 C A1852 118.324 106.258 83.062 1.00 56.04 C
ATOM 22 P A A1853 117.948 99.566 82.732 1.00 60.87 P
ATOM 23 OP1 A A1853 119.021 99.320 83.736 1.00 59.48 O
ATOM 24 OP2 A A1853 118.090 99.040 81.343 1.00 58.07 O
ATOM 25 O5' A A1853 116.579 99.023 83.334 1.00 59.25 O
TER
ATOM 1 O3' U B1897 120.459 111.902 81.022 1.00 46.46 O
ATOM 2 P C B1898 120.117 111.907 82.585 1.00 48.48 P
ATOM 3 OP1 C B1898 120.631 113.180 83.157 1.00 50.03 O
ATOM 4 OP2 C B1898 120.533 110.611 83.179 1.00 47.70 O
ATOM 5 O5' C B1898 118.530 111.961 82.615 1.00 50.01 O
ATOM 6 C5' C B1898 117.815 113.106 82.120 1.00 49.59 C
ATOM 7 C4' C B1898 116.654 113.400 83.031 1.00 49.75 C
ATOM 8 O4' C B1898 115.854 112.199 83.145 1.00 50.63 O
ATOM 9 C3' C B1898 117.044 113.750 84.458 1.00 49.70 C
ATOM 10 O3' C B1898 117.242 115.159 84.547 1.00 50.13 O
ATOM 11 C2' C B1898 115.829 113.299 85.258 1.00 49.50 C
ATOM 12 O2' C B1898 114.794 114.255 85.223 1.00 48.49 O
ATOM 13 C1' C B1898 115.381 112.066 84.469 1.00 50.38 C
ATOM 14 N1 C B1898 115.810 110.749 84.964 1.00 51.37 N
ATOM 15 C2 C B1898 114.897 109.698 84.922 1.00 53.13 C
ATOM 16 O2 C B1898 113.746 109.920 84.517 1.00 53.96 O
ATOM 17 N3 C B1898 115.285 108.466 85.326 1.00 53.66 N
ATOM 18 C4 C B1898 116.525 108.271 85.770 1.00 52.25 C
ATOM 19 N4 C B1898 116.865 107.041 86.145 1.00 53.72 N
ATOM 20 C5 C B1898 117.471 109.329 85.845 1.00 52.13 C
ATOM 21 C6 C B1898 117.076 110.541 85.437 1.00 52.66 C
ATOM 22 P A B1899 118.046 115.792 85.785 1.00 49.11 P
ATOM 23 OP1 A B1899 119.446 115.973 85.324 1.00 52.39 O
ATOM 24 OP2 A B1899 117.773 115.028 87.029 1.00 47.38 O
ATOM 25 O5' A B1899 117.389 117.231 85.937 1.00 48.35 O
TER
Atoms:
C2: (116.225,106.026,81.924)
OP1: (120.453,101.740,86.680)
OP2: (121.059,104.233,86.870)
C4: (117.163,108.133,82.217)
O5': (118.832,103.507,86.020)
C3': (118.314,102.016,83.569)
C1': (117.332,104.002,82.794)
O4': (116.696,103.704,84.016)
C5': (117.670,102.675,85.974)
P: (120.050,103.141,86.976)
O2: (115.322,105.281,81.502)
C4': (117.234,102.464,84.548)
C2': (118.692,103.317,82.868)
O2': (119.195,103.110,81.563)
N1: (117.314,105.461,82.597)
N3: (116.181,107.365,81.750)
N4: (117.063,109.446,82.039)
C6: (118.324,106.258,83.062)
C5: (118.289,107.587,82.893)
O3': (117.723,101.148,82.614)
OP1: (120.453,101.740,86.680)
OP2: (121.059,104.233,86.870)
C4: (117.163,108.133,82.217)
O5': (118.832,103.507,86.020)
C3': (118.314,102.016,83.569)
C1': (117.332,104.002,82.794)
O4': (116.696,103.704,84.016)
C5': (117.670,102.675,85.974)
P: (120.050,103.141,86.976)
O2: (115.322,105.281,81.502)
C4': (117.234,102.464,84.548)
C2': (118.692,103.317,82.868)
O2': (119.195,103.110,81.563)
N1: (117.314,105.461,82.597)
N3: (116.181,107.365,81.750)
N4: (117.063,109.446,82.039)
C6: (118.324,106.258,83.062)
C5: (118.289,107.587,82.893)
O3': (117.723,101.148,82.614)
C2: (114.897,109.698,84.922)
OP1: (120.631,113.180,83.157)
OP2: (120.533,110.611,83.179)
C4: (116.525,108.271,85.770)
O5': (118.530,111.961,82.615)
C3': (117.044,113.750,84.458)
C1': (115.381,112.066,84.469)
O4': (115.854,112.199,83.145)
C5': (117.815,113.106,82.120)
P: (120.117,111.907,82.585)
O2: (113.746,109.920,84.517)
C4': (116.654,113.400,83.031)
C2': (115.829,113.299,85.258)
O2': (114.794,114.255,85.223)
N1: (115.810,110.749,84.964)
N3: (115.285,108.466,85.326)
N4: (116.865,107.041,86.145)
C6: (117.076,110.541,85.437)
C5: (117.471,109.329,85.845)
O3': (117.242,115.159,84.547)
OP1: (120.631,113.180,83.157)
OP2: (120.533,110.611,83.179)
C4: (116.525,108.271,85.770)
O5': (118.530,111.961,82.615)
C3': (117.044,113.750,84.458)
C1': (115.381,112.066,84.469)
O4': (115.854,112.199,83.145)
C5': (117.815,113.106,82.120)
P: (120.117,111.907,82.585)
O2: (113.746,109.920,84.517)
C4': (116.654,113.400,83.031)
C2': (115.829,113.299,85.258)
O2': (114.794,114.255,85.223)
N1: (115.810,110.749,84.964)
N3: (115.285,108.466,85.326)
N4: (116.865,107.041,86.145)
C6: (117.076,110.541,85.437)
C5: (117.471,109.329,85.845)
O3': (117.242,115.159,84.547)
Image (generated by PyMOL):