Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01928:01952
Extra
PDB:
ATOM 1 O3' A A1927 96.470 115.877 109.493 1.00 53.67 O
ATOM 2 P C A1928 94.913 116.268 109.473 1.00 56.04 P
ATOM 3 OP1 C A1928 94.559 116.708 108.096 1.00 56.32 O
ATOM 4 OP2 C A1928 94.665 117.179 110.623 1.00 55.68 O
ATOM 5 O5' C A1928 94.198 114.876 109.779 1.00 54.63 O
ATOM 6 C5' C A1928 92.974 114.480 109.120 1.00 52.66 C
ATOM 7 C4' C A1928 92.695 113.019 109.396 1.00 52.73 C
ATOM 8 O4' C A1928 93.757 112.222 108.813 1.00 53.21 O
ATOM 9 C3' C A1928 92.694 112.643 110.870 1.00 52.62 C
ATOM 10 O3' C A1928 91.411 112.830 111.443 1.00 52.89 O
ATOM 11 C2' C A1928 93.107 111.179 110.850 1.00 52.84 C
ATOM 12 O2' C A1928 92.047 110.308 110.530 1.00 54.00 O
ATOM 13 C1' C A1928 94.105 111.165 109.692 1.00 52.76 C
ATOM 14 N1 C A1928 95.519 111.328 110.081 1.00 53.52 N
ATOM 15 C2 C A1928 96.114 110.364 110.903 1.00 54.59 C
ATOM 16 O2 C A1928 95.419 109.430 111.338 1.00 55.26 O
ATOM 17 N3 C A1928 97.431 110.478 111.207 1.00 54.64 N
ATOM 18 C4 C A1928 98.139 111.507 110.733 1.00 53.86 C
ATOM 19 N4 C A1928 99.436 111.566 111.029 1.00 54.11 N
ATOM 20 C5 C A1928 97.549 112.517 109.927 1.00 54.44 C
ATOM 21 C6 C A1928 96.252 112.391 109.629 1.00 54.16 C
ATOM 22 P C A1929 91.252 113.736 112.754 1.00 55.28 P
ATOM 23 OP1 C A1929 89.811 113.780 113.128 1.00 55.42 O
ATOM 24 OP2 C A1929 91.983 115.007 112.505 1.00 55.44 O
ATOM 25 O5' C A1929 92.008 112.904 113.879 1.00 54.98 O
TER
ATOM 1 O3' G B1951 103.340 112.356 107.656 1.00 51.23 O
ATOM 2 P C B1952 101.783 112.194 108.035 1.00 51.78 P
ATOM 3 OP1 C B1952 101.054 113.173 107.195 1.00 49.66 O
ATOM 4 OP2 C B1952 101.643 112.250 109.512 1.00 50.28 O
ATOM 5 O5' C B1952 101.378 110.729 107.540 1.00 53.65 O
ATOM 6 C5' C B1952 101.426 109.591 108.434 1.00 53.37 C
ATOM 7 C4' C B1952 100.194 108.717 108.266 1.00 53.97 C
ATOM 8 O4' C B1952 99.000 109.459 108.634 1.00 54.51 O
ATOM 9 C3' C B1952 99.884 108.205 106.868 1.00 54.80 C
ATOM 10 O3' C B1952 100.651 107.052 106.545 1.00 58.56 O
ATOM 11 C2' C B1952 98.402 107.868 106.970 1.00 53.82 C
ATOM 12 O2' C B1952 98.165 106.625 107.597 1.00 53.01 O
ATOM 13 C1' C B1952 97.894 108.993 107.874 1.00 53.19 C
ATOM 14 N1 C B1952 97.319 110.124 107.120 1.00 54.00 N
ATOM 15 C2 C B1952 95.940 110.134 106.858 1.00 54.10 C
ATOM 16 O2 C B1952 95.237 109.199 107.273 1.00 55.96 O
ATOM 17 N3 C B1952 95.409 111.159 106.156 1.00 54.64 N
ATOM 18 C4 C B1952 96.194 112.149 105.722 1.00 54.82 C
ATOM 19 N4 C B1952 95.627 113.143 105.035 1.00 54.49 N
ATOM 20 C5 C B1952 97.596 112.165 105.975 1.00 54.28 C
ATOM 21 C6 C B1952 98.111 111.146 106.672 1.00 53.61 C
ATOM 22 P A B1953 101.077 106.779 105.016 1.00 61.09 P
ATOM 23 OP1 A B1953 99.861 106.534 104.191 1.00 60.94 O
ATOM 24 OP2 A B1953 102.171 105.769 105.031 1.00 61.94 O
ATOM 25 O5' A B1953 101.707 108.164 104.558 1.00 59.88 O
TER
ATOM 2 P C A1928 94.913 116.268 109.473 1.00 56.04 P
ATOM 3 OP1 C A1928 94.559 116.708 108.096 1.00 56.32 O
ATOM 4 OP2 C A1928 94.665 117.179 110.623 1.00 55.68 O
ATOM 5 O5' C A1928 94.198 114.876 109.779 1.00 54.63 O
ATOM 6 C5' C A1928 92.974 114.480 109.120 1.00 52.66 C
ATOM 7 C4' C A1928 92.695 113.019 109.396 1.00 52.73 C
ATOM 8 O4' C A1928 93.757 112.222 108.813 1.00 53.21 O
ATOM 9 C3' C A1928 92.694 112.643 110.870 1.00 52.62 C
ATOM 10 O3' C A1928 91.411 112.830 111.443 1.00 52.89 O
ATOM 11 C2' C A1928 93.107 111.179 110.850 1.00 52.84 C
ATOM 12 O2' C A1928 92.047 110.308 110.530 1.00 54.00 O
ATOM 13 C1' C A1928 94.105 111.165 109.692 1.00 52.76 C
ATOM 14 N1 C A1928 95.519 111.328 110.081 1.00 53.52 N
ATOM 15 C2 C A1928 96.114 110.364 110.903 1.00 54.59 C
ATOM 16 O2 C A1928 95.419 109.430 111.338 1.00 55.26 O
ATOM 17 N3 C A1928 97.431 110.478 111.207 1.00 54.64 N
ATOM 18 C4 C A1928 98.139 111.507 110.733 1.00 53.86 C
ATOM 19 N4 C A1928 99.436 111.566 111.029 1.00 54.11 N
ATOM 20 C5 C A1928 97.549 112.517 109.927 1.00 54.44 C
ATOM 21 C6 C A1928 96.252 112.391 109.629 1.00 54.16 C
ATOM 22 P C A1929 91.252 113.736 112.754 1.00 55.28 P
ATOM 23 OP1 C A1929 89.811 113.780 113.128 1.00 55.42 O
ATOM 24 OP2 C A1929 91.983 115.007 112.505 1.00 55.44 O
ATOM 25 O5' C A1929 92.008 112.904 113.879 1.00 54.98 O
TER
ATOM 1 O3' G B1951 103.340 112.356 107.656 1.00 51.23 O
ATOM 2 P C B1952 101.783 112.194 108.035 1.00 51.78 P
ATOM 3 OP1 C B1952 101.054 113.173 107.195 1.00 49.66 O
ATOM 4 OP2 C B1952 101.643 112.250 109.512 1.00 50.28 O
ATOM 5 O5' C B1952 101.378 110.729 107.540 1.00 53.65 O
ATOM 6 C5' C B1952 101.426 109.591 108.434 1.00 53.37 C
ATOM 7 C4' C B1952 100.194 108.717 108.266 1.00 53.97 C
ATOM 8 O4' C B1952 99.000 109.459 108.634 1.00 54.51 O
ATOM 9 C3' C B1952 99.884 108.205 106.868 1.00 54.80 C
ATOM 10 O3' C B1952 100.651 107.052 106.545 1.00 58.56 O
ATOM 11 C2' C B1952 98.402 107.868 106.970 1.00 53.82 C
ATOM 12 O2' C B1952 98.165 106.625 107.597 1.00 53.01 O
ATOM 13 C1' C B1952 97.894 108.993 107.874 1.00 53.19 C
ATOM 14 N1 C B1952 97.319 110.124 107.120 1.00 54.00 N
ATOM 15 C2 C B1952 95.940 110.134 106.858 1.00 54.10 C
ATOM 16 O2 C B1952 95.237 109.199 107.273 1.00 55.96 O
ATOM 17 N3 C B1952 95.409 111.159 106.156 1.00 54.64 N
ATOM 18 C4 C B1952 96.194 112.149 105.722 1.00 54.82 C
ATOM 19 N4 C B1952 95.627 113.143 105.035 1.00 54.49 N
ATOM 20 C5 C B1952 97.596 112.165 105.975 1.00 54.28 C
ATOM 21 C6 C B1952 98.111 111.146 106.672 1.00 53.61 C
ATOM 22 P A B1953 101.077 106.779 105.016 1.00 61.09 P
ATOM 23 OP1 A B1953 99.861 106.534 104.191 1.00 60.94 O
ATOM 24 OP2 A B1953 102.171 105.769 105.031 1.00 61.94 O
ATOM 25 O5' A B1953 101.707 108.164 104.558 1.00 59.88 O
TER
Atoms:
C2: (96.114,110.364,110.903)
OP1: (94.559,116.708,108.096)
OP2: (94.665,117.179,110.623)
C4: (98.139,111.507,110.733)
O5': (94.198,114.876,109.779)
C3': (92.694,112.643,110.870)
C1': (94.105,111.165,109.692)
O4': (93.757,112.222,108.813)
C5': (92.974,114.480,109.120)
P: (94.913,116.268,109.473)
O2: (95.419,109.430,111.338)
C4': (92.695,113.019,109.396)
C2': (93.107,111.179,110.850)
O2': (92.047,110.308,110.530)
N1: (95.519,111.328,110.081)
N3: (97.431,110.478,111.207)
N4: (99.436,111.566,111.029)
C6: (96.252,112.391,109.629)
C5: (97.549,112.517,109.927)
O3': (91.411,112.830,111.443)
OP1: (94.559,116.708,108.096)
OP2: (94.665,117.179,110.623)
C4: (98.139,111.507,110.733)
O5': (94.198,114.876,109.779)
C3': (92.694,112.643,110.870)
C1': (94.105,111.165,109.692)
O4': (93.757,112.222,108.813)
C5': (92.974,114.480,109.120)
P: (94.913,116.268,109.473)
O2: (95.419,109.430,111.338)
C4': (92.695,113.019,109.396)
C2': (93.107,111.179,110.850)
O2': (92.047,110.308,110.530)
N1: (95.519,111.328,110.081)
N3: (97.431,110.478,111.207)
N4: (99.436,111.566,111.029)
C6: (96.252,112.391,109.629)
C5: (97.549,112.517,109.927)
O3': (91.411,112.830,111.443)
C2: (95.940,110.134,106.858)
OP1: (101.054,113.173,107.195)
OP2: (101.643,112.250,109.512)
C4: (96.194,112.149,105.722)
O5': (101.378,110.729,107.540)
C3': (99.884,108.205,106.868)
C1': (97.894,108.993,107.874)
O4': (99.000,109.459,108.634)
C5': (101.426,109.591,108.434)
P: (101.783,112.194,108.035)
O2: (95.237,109.199,107.273)
C4': (100.194,108.717,108.266)
C2': (98.402,107.868,106.970)
O2': (98.165,106.625,107.597)
N1: (97.319,110.124,107.120)
N3: (95.409,111.159,106.156)
N4: (95.627,113.143,105.035)
C6: (98.111,111.146,106.672)
C5: (97.596,112.165,105.975)
O3': (100.651,107.052,106.545)
OP1: (101.054,113.173,107.195)
OP2: (101.643,112.250,109.512)
C4: (96.194,112.149,105.722)
O5': (101.378,110.729,107.540)
C3': (99.884,108.205,106.868)
C1': (97.894,108.993,107.874)
O4': (99.000,109.459,108.634)
C5': (101.426,109.591,108.434)
P: (101.783,112.194,108.035)
O2: (95.237,109.199,107.273)
C4': (100.194,108.717,108.266)
C2': (98.402,107.868,106.970)
O2': (98.165,106.625,107.597)
N1: (97.319,110.124,107.120)
N3: (95.409,111.159,106.156)
N4: (95.627,113.143,105.035)
C6: (98.111,111.146,106.672)
C5: (97.596,112.165,105.975)
O3': (100.651,107.052,106.545)
Image (generated by PyMOL):