Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01852:01898
Extra
PDB:
ATOM 1 O3' C A1851 119.469 103.149 88.317 1.00 52.95 O
ATOM 2 P C A1852 120.077 103.173 86.832 1.00 54.99 P
ATOM 3 OP1 C A1852 120.443 101.777 86.481 1.00 54.60 O
ATOM 4 OP2 C A1852 121.111 104.245 86.772 1.00 53.95 O
ATOM 5 O5' C A1852 118.845 103.595 85.914 1.00 54.98 O
ATOM 6 C5' C A1852 117.654 102.791 85.878 1.00 55.05 C
ATOM 7 C4' C A1852 117.237 102.533 84.450 1.00 54.77 C
ATOM 8 O4' C A1852 116.684 103.745 83.873 1.00 54.46 O
ATOM 9 C3' C A1852 118.338 102.077 83.496 1.00 54.60 C
ATOM 10 O3' C A1852 117.751 101.236 82.512 1.00 56.06 O
ATOM 11 C2' C A1852 118.739 103.382 82.818 1.00 54.06 C
ATOM 12 O2' C A1852 119.324 103.195 81.544 1.00 53.16 O
ATOM 13 C1' C A1852 117.373 104.046 82.678 1.00 54.03 C
ATOM 14 N1 C A1852 117.336 105.503 82.468 1.00 53.09 N
ATOM 15 C2 C A1852 116.285 106.037 81.711 1.00 51.54 C
ATOM 16 O2 C A1852 115.429 105.269 81.233 1.00 48.31 O
ATOM 17 N3 C A1852 116.226 107.374 81.521 1.00 51.58 N
ATOM 18 C4 C A1852 117.156 108.167 82.052 1.00 50.39 C
ATOM 19 N4 C A1852 117.042 109.476 81.855 1.00 49.06 N
ATOM 20 C5 C A1852 118.240 107.651 82.816 1.00 52.07 C
ATOM 21 C6 C A1852 118.292 106.326 82.999 1.00 52.99 C
ATOM 22 P A A1853 117.956 99.651 82.587 1.00 56.41 P
ATOM 23 OP1 A A1853 119.098 99.359 83.497 1.00 55.13 O
ATOM 24 OP2 A A1853 117.974 99.153 81.185 1.00 54.23 O
ATOM 25 O5' A A1853 116.621 99.115 83.266 1.00 55.02 O
TER
ATOM 1 O3' U B1897 120.552 111.934 80.979 1.00 45.71 O
ATOM 2 P C B1898 120.110 111.938 82.520 1.00 46.44 P
ATOM 3 OP1 C B1898 120.561 113.215 83.129 1.00 47.90 O
ATOM 4 OP2 C B1898 120.503 110.652 83.142 1.00 45.96 O
ATOM 5 O5' C B1898 118.524 111.969 82.458 1.00 48.85 O
ATOM 6 C5' C B1898 117.812 113.135 82.003 1.00 48.10 C
ATOM 7 C4' C B1898 116.654 113.410 82.927 1.00 47.89 C
ATOM 8 O4' C B1898 115.864 112.202 83.045 1.00 48.46 O
ATOM 9 C3' C B1898 117.063 113.759 84.346 1.00 47.33 C
ATOM 10 O3' C B1898 117.221 115.171 84.429 1.00 47.86 O
ATOM 11 C2' C B1898 115.886 113.265 85.176 1.00 47.88 C
ATOM 12 O2' C B1898 114.823 114.189 85.212 1.00 49.42 O
ATOM 13 C1' C B1898 115.436 112.039 84.377 1.00 48.48 C
ATOM 14 N1 C B1898 115.900 110.721 84.839 1.00 49.89 N
ATOM 15 C2 C B1898 114.988 109.667 84.851 1.00 51.62 C
ATOM 16 O2 C B1898 113.821 109.879 84.490 1.00 52.34 O
ATOM 17 N3 C B1898 115.397 108.441 85.253 1.00 52.27 N
ATOM 18 C4 C B1898 116.657 108.254 85.639 1.00 50.74 C
ATOM 19 N4 C B1898 117.011 107.032 86.031 1.00 51.03 N
ATOM 20 C5 C B1898 117.609 109.311 85.639 1.00 51.00 C
ATOM 21 C6 C B1898 117.192 110.518 85.238 1.00 50.83 C
ATOM 22 P A B1899 118.091 115.820 85.606 1.00 48.50 P
ATOM 23 OP1 A B1899 119.479 115.963 85.096 1.00 51.47 O
ATOM 24 OP2 A B1899 117.840 115.069 86.867 1.00 47.85 O
ATOM 25 O5' A B1899 117.478 117.278 85.755 1.00 47.19 O
TER
ATOM 2 P C A1852 120.077 103.173 86.832 1.00 54.99 P
ATOM 3 OP1 C A1852 120.443 101.777 86.481 1.00 54.60 O
ATOM 4 OP2 C A1852 121.111 104.245 86.772 1.00 53.95 O
ATOM 5 O5' C A1852 118.845 103.595 85.914 1.00 54.98 O
ATOM 6 C5' C A1852 117.654 102.791 85.878 1.00 55.05 C
ATOM 7 C4' C A1852 117.237 102.533 84.450 1.00 54.77 C
ATOM 8 O4' C A1852 116.684 103.745 83.873 1.00 54.46 O
ATOM 9 C3' C A1852 118.338 102.077 83.496 1.00 54.60 C
ATOM 10 O3' C A1852 117.751 101.236 82.512 1.00 56.06 O
ATOM 11 C2' C A1852 118.739 103.382 82.818 1.00 54.06 C
ATOM 12 O2' C A1852 119.324 103.195 81.544 1.00 53.16 O
ATOM 13 C1' C A1852 117.373 104.046 82.678 1.00 54.03 C
ATOM 14 N1 C A1852 117.336 105.503 82.468 1.00 53.09 N
ATOM 15 C2 C A1852 116.285 106.037 81.711 1.00 51.54 C
ATOM 16 O2 C A1852 115.429 105.269 81.233 1.00 48.31 O
ATOM 17 N3 C A1852 116.226 107.374 81.521 1.00 51.58 N
ATOM 18 C4 C A1852 117.156 108.167 82.052 1.00 50.39 C
ATOM 19 N4 C A1852 117.042 109.476 81.855 1.00 49.06 N
ATOM 20 C5 C A1852 118.240 107.651 82.816 1.00 52.07 C
ATOM 21 C6 C A1852 118.292 106.326 82.999 1.00 52.99 C
ATOM 22 P A A1853 117.956 99.651 82.587 1.00 56.41 P
ATOM 23 OP1 A A1853 119.098 99.359 83.497 1.00 55.13 O
ATOM 24 OP2 A A1853 117.974 99.153 81.185 1.00 54.23 O
ATOM 25 O5' A A1853 116.621 99.115 83.266 1.00 55.02 O
TER
ATOM 1 O3' U B1897 120.552 111.934 80.979 1.00 45.71 O
ATOM 2 P C B1898 120.110 111.938 82.520 1.00 46.44 P
ATOM 3 OP1 C B1898 120.561 113.215 83.129 1.00 47.90 O
ATOM 4 OP2 C B1898 120.503 110.652 83.142 1.00 45.96 O
ATOM 5 O5' C B1898 118.524 111.969 82.458 1.00 48.85 O
ATOM 6 C5' C B1898 117.812 113.135 82.003 1.00 48.10 C
ATOM 7 C4' C B1898 116.654 113.410 82.927 1.00 47.89 C
ATOM 8 O4' C B1898 115.864 112.202 83.045 1.00 48.46 O
ATOM 9 C3' C B1898 117.063 113.759 84.346 1.00 47.33 C
ATOM 10 O3' C B1898 117.221 115.171 84.429 1.00 47.86 O
ATOM 11 C2' C B1898 115.886 113.265 85.176 1.00 47.88 C
ATOM 12 O2' C B1898 114.823 114.189 85.212 1.00 49.42 O
ATOM 13 C1' C B1898 115.436 112.039 84.377 1.00 48.48 C
ATOM 14 N1 C B1898 115.900 110.721 84.839 1.00 49.89 N
ATOM 15 C2 C B1898 114.988 109.667 84.851 1.00 51.62 C
ATOM 16 O2 C B1898 113.821 109.879 84.490 1.00 52.34 O
ATOM 17 N3 C B1898 115.397 108.441 85.253 1.00 52.27 N
ATOM 18 C4 C B1898 116.657 108.254 85.639 1.00 50.74 C
ATOM 19 N4 C B1898 117.011 107.032 86.031 1.00 51.03 N
ATOM 20 C5 C B1898 117.609 109.311 85.639 1.00 51.00 C
ATOM 21 C6 C B1898 117.192 110.518 85.238 1.00 50.83 C
ATOM 22 P A B1899 118.091 115.820 85.606 1.00 48.50 P
ATOM 23 OP1 A B1899 119.479 115.963 85.096 1.00 51.47 O
ATOM 24 OP2 A B1899 117.840 115.069 86.867 1.00 47.85 O
ATOM 25 O5' A B1899 117.478 117.278 85.755 1.00 47.19 O
TER
Atoms:
C2: (116.285,106.037,81.711)
OP1: (120.443,101.777,86.481)
OP2: (121.111,104.245,86.772)
C4: (117.156,108.167,82.052)
O5': (118.845,103.595,85.914)
C3': (118.338,102.077,83.496)
C1': (117.373,104.046,82.678)
O4': (116.684,103.745,83.873)
C5': (117.654,102.791,85.878)
P: (120.077,103.173,86.832)
O2: (115.429,105.269,81.233)
C4': (117.237,102.533,84.450)
C2': (118.739,103.382,82.818)
O2': (119.324,103.195,81.544)
N1: (117.336,105.503,82.468)
N3: (116.226,107.374,81.521)
N4: (117.042,109.476,81.855)
C6: (118.292,106.326,82.999)
C5: (118.240,107.651,82.816)
O3': (117.751,101.236,82.512)
OP1: (120.443,101.777,86.481)
OP2: (121.111,104.245,86.772)
C4: (117.156,108.167,82.052)
O5': (118.845,103.595,85.914)
C3': (118.338,102.077,83.496)
C1': (117.373,104.046,82.678)
O4': (116.684,103.745,83.873)
C5': (117.654,102.791,85.878)
P: (120.077,103.173,86.832)
O2: (115.429,105.269,81.233)
C4': (117.237,102.533,84.450)
C2': (118.739,103.382,82.818)
O2': (119.324,103.195,81.544)
N1: (117.336,105.503,82.468)
N3: (116.226,107.374,81.521)
N4: (117.042,109.476,81.855)
C6: (118.292,106.326,82.999)
C5: (118.240,107.651,82.816)
O3': (117.751,101.236,82.512)
C2: (114.988,109.667,84.851)
OP1: (120.561,113.215,83.129)
OP2: (120.503,110.652,83.142)
C4: (116.657,108.254,85.639)
O5': (118.524,111.969,82.458)
C3': (117.063,113.759,84.346)
C1': (115.436,112.039,84.377)
O4': (115.864,112.202,83.045)
C5': (117.812,113.135,82.003)
P: (120.110,111.938,82.520)
O2: (113.821,109.879,84.490)
C4': (116.654,113.410,82.927)
C2': (115.886,113.265,85.176)
O2': (114.823,114.189,85.212)
N1: (115.900,110.721,84.839)
N3: (115.397,108.441,85.253)
N4: (117.011,107.032,86.031)
C6: (117.192,110.518,85.238)
C5: (117.609,109.311,85.639)
O3': (117.221,115.171,84.429)
OP1: (120.561,113.215,83.129)
OP2: (120.503,110.652,83.142)
C4: (116.657,108.254,85.639)
O5': (118.524,111.969,82.458)
C3': (117.063,113.759,84.346)
C1': (115.436,112.039,84.377)
O4': (115.864,112.202,83.045)
C5': (117.812,113.135,82.003)
P: (120.110,111.938,82.520)
O2: (113.821,109.879,84.490)
C4': (116.654,113.410,82.927)
C2': (115.886,113.265,85.176)
O2': (114.823,114.189,85.212)
N1: (115.900,110.721,84.839)
N3: (115.397,108.441,85.253)
N4: (117.011,107.032,86.031)
C6: (117.192,110.518,85.238)
C5: (117.609,109.311,85.639)
O3': (117.221,115.171,84.429)
Image (generated by PyMOL):