Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01928:01952
Extra
PDB:
ATOM 1 O3' A A1927 96.647 115.907 109.527 1.00 58.27 O
ATOM 2 P C A1928 95.073 116.226 109.504 1.00 58.01 P
ATOM 3 OP1 C A1928 94.696 116.744 108.166 1.00 58.05 O
ATOM 4 OP2 C A1928 94.761 117.026 110.715 1.00 57.46 O
ATOM 5 O5' C A1928 94.448 114.776 109.709 1.00 58.62 O
ATOM 6 C5' C A1928 93.230 114.358 109.068 1.00 58.39 C
ATOM 7 C4' C A1928 92.978 112.899 109.376 1.00 58.28 C
ATOM 8 O4' C A1928 94.068 112.117 108.828 1.00 58.44 O
ATOM 9 C3' C A1928 92.983 112.565 110.862 1.00 57.64 C
ATOM 10 O3' C A1928 91.695 112.747 111.433 1.00 57.55 O
ATOM 11 C2' C A1928 93.415 111.109 110.887 1.00 56.93 C
ATOM 12 O2' C A1928 92.362 110.215 110.621 1.00 57.84 O
ATOM 13 C1' C A1928 94.403 111.067 109.722 1.00 57.93 C
ATOM 14 N1 C A1928 95.821 111.205 110.106 1.00 58.41 N
ATOM 15 C2 C A1928 96.392 110.249 110.957 1.00 60.15 C
ATOM 16 O2 C A1928 95.678 109.330 111.400 1.00 62.05 O
ATOM 17 N3 C A1928 97.703 110.351 111.275 1.00 60.27 N
ATOM 18 C4 C A1928 98.433 111.355 110.782 1.00 59.29 C
ATOM 19 N4 C A1928 99.726 111.404 111.101 1.00 60.81 N
ATOM 20 C5 C A1928 97.872 112.348 109.936 1.00 58.08 C
ATOM 21 C6 C A1928 96.578 112.239 109.628 1.00 57.94 C
ATOM 22 P C A1929 91.521 113.694 112.717 1.00 58.54 P
ATOM 23 OP1 C A1929 90.066 113.761 113.013 1.00 58.13 O
ATOM 24 OP2 C A1929 92.285 114.952 112.479 1.00 58.41 O
ATOM 25 O5' C A1929 92.219 112.878 113.893 1.00 58.58 O
TER
ATOM 1 O3' G B1951 103.519 112.520 107.729 1.00 59.79 O
ATOM 2 P C B1952 101.978 112.213 108.069 1.00 59.32 P
ATOM 3 OP1 C B1952 101.151 113.126 107.239 1.00 58.23 O
ATOM 4 OP2 C B1952 101.831 112.241 109.544 1.00 58.54 O
ATOM 5 O5' C B1952 101.735 110.721 107.554 1.00 60.66 O
ATOM 6 C5' C B1952 101.750 109.598 108.466 1.00 61.84 C
ATOM 7 C4' C B1952 100.512 108.731 108.286 1.00 62.68 C
ATOM 8 O4' C B1952 99.320 109.503 108.583 1.00 63.12 O
ATOM 9 C3' C B1952 100.228 108.168 106.903 1.00 63.13 C
ATOM 10 O3' C B1952 100.984 106.994 106.638 1.00 67.17 O
ATOM 11 C2' C B1952 98.747 107.834 106.988 1.00 61.75 C
ATOM 12 O2' C B1952 98.513 106.615 107.663 1.00 60.58 O
ATOM 13 C1' C B1952 98.224 108.992 107.839 1.00 61.64 C
ATOM 14 N1 C B1952 97.621 110.090 107.062 1.00 60.84 N
ATOM 15 C2 C B1952 96.222 110.112 106.880 1.00 60.88 C
ATOM 16 O2 C B1952 95.526 109.185 107.341 1.00 61.17 O
ATOM 17 N3 C B1952 95.666 111.139 106.201 1.00 60.20 N
ATOM 18 C4 C B1952 96.439 112.105 105.699 1.00 60.12 C
ATOM 19 N4 C B1952 95.843 113.101 105.048 1.00 61.18 N
ATOM 20 C5 C B1952 97.856 112.093 105.846 1.00 60.22 C
ATOM 21 C6 C B1952 98.399 111.079 106.529 1.00 59.95 C
ATOM 22 P A B1953 101.421 106.654 105.128 1.00 70.12 P
ATOM 23 OP1 A B1953 100.225 106.248 104.339 1.00 69.11 O
ATOM 24 OP2 A B1953 102.599 105.739 105.216 1.00 70.15 O
ATOM 25 O5' A B1953 101.906 108.056 104.558 1.00 67.62 O
TER
ATOM 2 P C A1928 95.073 116.226 109.504 1.00 58.01 P
ATOM 3 OP1 C A1928 94.696 116.744 108.166 1.00 58.05 O
ATOM 4 OP2 C A1928 94.761 117.026 110.715 1.00 57.46 O
ATOM 5 O5' C A1928 94.448 114.776 109.709 1.00 58.62 O
ATOM 6 C5' C A1928 93.230 114.358 109.068 1.00 58.39 C
ATOM 7 C4' C A1928 92.978 112.899 109.376 1.00 58.28 C
ATOM 8 O4' C A1928 94.068 112.117 108.828 1.00 58.44 O
ATOM 9 C3' C A1928 92.983 112.565 110.862 1.00 57.64 C
ATOM 10 O3' C A1928 91.695 112.747 111.433 1.00 57.55 O
ATOM 11 C2' C A1928 93.415 111.109 110.887 1.00 56.93 C
ATOM 12 O2' C A1928 92.362 110.215 110.621 1.00 57.84 O
ATOM 13 C1' C A1928 94.403 111.067 109.722 1.00 57.93 C
ATOM 14 N1 C A1928 95.821 111.205 110.106 1.00 58.41 N
ATOM 15 C2 C A1928 96.392 110.249 110.957 1.00 60.15 C
ATOM 16 O2 C A1928 95.678 109.330 111.400 1.00 62.05 O
ATOM 17 N3 C A1928 97.703 110.351 111.275 1.00 60.27 N
ATOM 18 C4 C A1928 98.433 111.355 110.782 1.00 59.29 C
ATOM 19 N4 C A1928 99.726 111.404 111.101 1.00 60.81 N
ATOM 20 C5 C A1928 97.872 112.348 109.936 1.00 58.08 C
ATOM 21 C6 C A1928 96.578 112.239 109.628 1.00 57.94 C
ATOM 22 P C A1929 91.521 113.694 112.717 1.00 58.54 P
ATOM 23 OP1 C A1929 90.066 113.761 113.013 1.00 58.13 O
ATOM 24 OP2 C A1929 92.285 114.952 112.479 1.00 58.41 O
ATOM 25 O5' C A1929 92.219 112.878 113.893 1.00 58.58 O
TER
ATOM 1 O3' G B1951 103.519 112.520 107.729 1.00 59.79 O
ATOM 2 P C B1952 101.978 112.213 108.069 1.00 59.32 P
ATOM 3 OP1 C B1952 101.151 113.126 107.239 1.00 58.23 O
ATOM 4 OP2 C B1952 101.831 112.241 109.544 1.00 58.54 O
ATOM 5 O5' C B1952 101.735 110.721 107.554 1.00 60.66 O
ATOM 6 C5' C B1952 101.750 109.598 108.466 1.00 61.84 C
ATOM 7 C4' C B1952 100.512 108.731 108.286 1.00 62.68 C
ATOM 8 O4' C B1952 99.320 109.503 108.583 1.00 63.12 O
ATOM 9 C3' C B1952 100.228 108.168 106.903 1.00 63.13 C
ATOM 10 O3' C B1952 100.984 106.994 106.638 1.00 67.17 O
ATOM 11 C2' C B1952 98.747 107.834 106.988 1.00 61.75 C
ATOM 12 O2' C B1952 98.513 106.615 107.663 1.00 60.58 O
ATOM 13 C1' C B1952 98.224 108.992 107.839 1.00 61.64 C
ATOM 14 N1 C B1952 97.621 110.090 107.062 1.00 60.84 N
ATOM 15 C2 C B1952 96.222 110.112 106.880 1.00 60.88 C
ATOM 16 O2 C B1952 95.526 109.185 107.341 1.00 61.17 O
ATOM 17 N3 C B1952 95.666 111.139 106.201 1.00 60.20 N
ATOM 18 C4 C B1952 96.439 112.105 105.699 1.00 60.12 C
ATOM 19 N4 C B1952 95.843 113.101 105.048 1.00 61.18 N
ATOM 20 C5 C B1952 97.856 112.093 105.846 1.00 60.22 C
ATOM 21 C6 C B1952 98.399 111.079 106.529 1.00 59.95 C
ATOM 22 P A B1953 101.421 106.654 105.128 1.00 70.12 P
ATOM 23 OP1 A B1953 100.225 106.248 104.339 1.00 69.11 O
ATOM 24 OP2 A B1953 102.599 105.739 105.216 1.00 70.15 O
ATOM 25 O5' A B1953 101.906 108.056 104.558 1.00 67.62 O
TER
Atoms:
C2: (96.392,110.249,110.957)
OP1: (94.696,116.744,108.166)
OP2: (94.761,117.026,110.715)
C4: (98.433,111.355,110.782)
O5': (94.448,114.776,109.709)
C3': (92.983,112.565,110.862)
C1': (94.403,111.067,109.722)
O4': (94.068,112.117,108.828)
C5': (93.230,114.358,109.068)
P: (95.073,116.226,109.504)
O2: (95.678,109.330,111.400)
C4': (92.978,112.899,109.376)
C2': (93.415,111.109,110.887)
O2': (92.362,110.215,110.621)
N1: (95.821,111.205,110.106)
N3: (97.703,110.351,111.275)
N4: (99.726,111.404,111.101)
C6: (96.578,112.239,109.628)
C5: (97.872,112.348,109.936)
O3': (91.695,112.747,111.433)
OP1: (94.696,116.744,108.166)
OP2: (94.761,117.026,110.715)
C4: (98.433,111.355,110.782)
O5': (94.448,114.776,109.709)
C3': (92.983,112.565,110.862)
C1': (94.403,111.067,109.722)
O4': (94.068,112.117,108.828)
C5': (93.230,114.358,109.068)
P: (95.073,116.226,109.504)
O2: (95.678,109.330,111.400)
C4': (92.978,112.899,109.376)
C2': (93.415,111.109,110.887)
O2': (92.362,110.215,110.621)
N1: (95.821,111.205,110.106)
N3: (97.703,110.351,111.275)
N4: (99.726,111.404,111.101)
C6: (96.578,112.239,109.628)
C5: (97.872,112.348,109.936)
O3': (91.695,112.747,111.433)
C2: (96.222,110.112,106.880)
OP1: (101.151,113.126,107.239)
OP2: (101.831,112.241,109.544)
C4: (96.439,112.105,105.699)
O5': (101.735,110.721,107.554)
C3': (100.228,108.168,106.903)
C1': (98.224,108.992,107.839)
O4': (99.320,109.503,108.583)
C5': (101.750,109.598,108.466)
P: (101.978,112.213,108.069)
O2: (95.526,109.185,107.341)
C4': (100.512,108.731,108.286)
C2': (98.747,107.834,106.988)
O2': (98.513,106.615,107.663)
N1: (97.621,110.090,107.062)
N3: (95.666,111.139,106.201)
N4: (95.843,113.101,105.048)
C6: (98.399,111.079,106.529)
C5: (97.856,112.093,105.846)
O3': (100.984,106.994,106.638)
OP1: (101.151,113.126,107.239)
OP2: (101.831,112.241,109.544)
C4: (96.439,112.105,105.699)
O5': (101.735,110.721,107.554)
C3': (100.228,108.168,106.903)
C1': (98.224,108.992,107.839)
O4': (99.320,109.503,108.583)
C5': (101.750,109.598,108.466)
P: (101.978,112.213,108.069)
O2: (95.526,109.185,107.341)
C4': (100.512,108.731,108.286)
C2': (98.747,107.834,106.988)
O2': (98.513,106.615,107.663)
N1: (97.621,110.090,107.062)
N3: (95.666,111.139,106.201)
N4: (95.843,113.101,105.048)
C6: (98.399,111.079,106.529)
C5: (97.856,112.093,105.846)
O3': (100.984,106.994,106.638)
Image (generated by PyMOL):