Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01852:01898
Extra
PDB:
ATOM 1 O3' C A1851 119.306 103.054 88.290 1.00 46.79 O
ATOM 2 P C A1852 119.931 103.105 86.814 1.00 49.13 P
ATOM 3 OP1 C A1852 120.394 101.734 86.474 1.00 48.42 O
ATOM 4 OP2 C A1852 120.892 104.241 86.748 1.00 48.93 O
ATOM 5 O5' C A1852 118.683 103.460 85.892 1.00 50.40 O
ATOM 6 C5' C A1852 117.522 102.609 85.863 1.00 51.07 C
ATOM 7 C4' C A1852 117.090 102.368 84.438 1.00 51.30 C
ATOM 8 O4' C A1852 116.488 103.571 83.884 1.00 51.49 O
ATOM 9 C3' C A1852 118.208 101.981 83.478 1.00 51.76 C
ATOM 10 O3' C A1852 117.665 101.147 82.480 1.00 53.96 O
ATOM 11 C2' C A1852 118.543 103.306 82.808 1.00 52.12 C
ATOM 12 O2' C A1852 119.131 103.136 81.531 1.00 52.72 O
ATOM 13 C1' C A1852 117.147 103.909 82.682 1.00 51.13 C
ATOM 14 N1 C A1852 117.064 105.364 82.485 1.00 49.77 N
ATOM 15 C2 C A1852 116.012 105.876 81.718 1.00 49.38 C
ATOM 16 O2 C A1852 115.182 105.090 81.226 1.00 48.33 O
ATOM 17 N3 C A1852 115.923 107.212 81.532 1.00 49.08 N
ATOM 18 C4 C A1852 116.826 108.024 82.079 1.00 47.44 C
ATOM 19 N4 C A1852 116.689 109.333 81.885 1.00 45.89 N
ATOM 20 C5 C A1852 117.907 107.530 82.856 1.00 48.96 C
ATOM 21 C6 C A1852 117.988 106.208 83.035 1.00 49.65 C
ATOM 22 P A A1853 117.837 99.568 82.589 1.00 55.13 P
ATOM 23 OP1 A A1853 118.996 99.279 83.483 1.00 54.15 O
ATOM 24 OP2 A A1853 117.842 99.074 81.185 1.00 55.39 O
ATOM 25 O5' A A1853 116.486 99.096 83.292 1.00 53.60 O
TER
ATOM 1 O3' U B1897 120.287 111.778 80.998 1.00 41.23 O
ATOM 2 P C B1898 119.870 111.794 82.541 1.00 41.38 P
ATOM 3 OP1 C B1898 120.312 113.085 83.118 1.00 42.88 O
ATOM 4 OP2 C B1898 120.323 110.526 83.152 1.00 41.35 O
ATOM 5 O5' C B1898 118.281 111.798 82.509 1.00 42.80 O
ATOM 6 C5' C B1898 117.546 112.941 82.030 1.00 43.47 C
ATOM 7 C4' C B1898 116.393 113.239 82.962 1.00 43.83 C
ATOM 8 O4' C B1898 115.579 112.045 83.097 1.00 44.06 O
ATOM 9 C3' C B1898 116.797 113.618 84.380 1.00 43.03 C
ATOM 10 O3' C B1898 116.988 115.033 84.445 1.00 42.74 O
ATOM 11 C2' C B1898 115.604 113.147 85.208 1.00 43.64 C
ATOM 12 O2' C B1898 114.537 114.071 85.218 1.00 42.53 O
ATOM 13 C1' C B1898 115.167 111.894 84.439 1.00 44.27 C
ATOM 14 N1 C B1898 115.692 110.602 84.921 1.00 45.80 N
ATOM 15 C2 C B1898 114.813 109.517 85.027 1.00 45.94 C
ATOM 16 O2 C B1898 113.617 109.680 84.743 1.00 46.32 O
ATOM 17 N3 C B1898 115.289 108.317 85.434 1.00 46.21 N
ATOM 18 C4 C B1898 116.584 108.177 85.728 1.00 46.81 C
ATOM 19 N4 C B1898 117.015 106.970 86.102 1.00 46.61 N
ATOM 20 C5 C B1898 117.498 109.267 85.644 1.00 46.78 C
ATOM 21 C6 C B1898 117.015 110.450 85.242 1.00 46.84 C
ATOM 22 P A B1899 117.885 115.686 85.609 1.00 43.79 P
ATOM 23 OP1 A B1899 119.267 115.840 85.093 1.00 44.37 O
ATOM 24 OP2 A B1899 117.656 114.950 86.875 1.00 43.07 O
ATOM 25 O5' A B1899 117.260 117.144 85.758 1.00 42.63 O
TER
ATOM 2 P C A1852 119.931 103.105 86.814 1.00 49.13 P
ATOM 3 OP1 C A1852 120.394 101.734 86.474 1.00 48.42 O
ATOM 4 OP2 C A1852 120.892 104.241 86.748 1.00 48.93 O
ATOM 5 O5' C A1852 118.683 103.460 85.892 1.00 50.40 O
ATOM 6 C5' C A1852 117.522 102.609 85.863 1.00 51.07 C
ATOM 7 C4' C A1852 117.090 102.368 84.438 1.00 51.30 C
ATOM 8 O4' C A1852 116.488 103.571 83.884 1.00 51.49 O
ATOM 9 C3' C A1852 118.208 101.981 83.478 1.00 51.76 C
ATOM 10 O3' C A1852 117.665 101.147 82.480 1.00 53.96 O
ATOM 11 C2' C A1852 118.543 103.306 82.808 1.00 52.12 C
ATOM 12 O2' C A1852 119.131 103.136 81.531 1.00 52.72 O
ATOM 13 C1' C A1852 117.147 103.909 82.682 1.00 51.13 C
ATOM 14 N1 C A1852 117.064 105.364 82.485 1.00 49.77 N
ATOM 15 C2 C A1852 116.012 105.876 81.718 1.00 49.38 C
ATOM 16 O2 C A1852 115.182 105.090 81.226 1.00 48.33 O
ATOM 17 N3 C A1852 115.923 107.212 81.532 1.00 49.08 N
ATOM 18 C4 C A1852 116.826 108.024 82.079 1.00 47.44 C
ATOM 19 N4 C A1852 116.689 109.333 81.885 1.00 45.89 N
ATOM 20 C5 C A1852 117.907 107.530 82.856 1.00 48.96 C
ATOM 21 C6 C A1852 117.988 106.208 83.035 1.00 49.65 C
ATOM 22 P A A1853 117.837 99.568 82.589 1.00 55.13 P
ATOM 23 OP1 A A1853 118.996 99.279 83.483 1.00 54.15 O
ATOM 24 OP2 A A1853 117.842 99.074 81.185 1.00 55.39 O
ATOM 25 O5' A A1853 116.486 99.096 83.292 1.00 53.60 O
TER
ATOM 1 O3' U B1897 120.287 111.778 80.998 1.00 41.23 O
ATOM 2 P C B1898 119.870 111.794 82.541 1.00 41.38 P
ATOM 3 OP1 C B1898 120.312 113.085 83.118 1.00 42.88 O
ATOM 4 OP2 C B1898 120.323 110.526 83.152 1.00 41.35 O
ATOM 5 O5' C B1898 118.281 111.798 82.509 1.00 42.80 O
ATOM 6 C5' C B1898 117.546 112.941 82.030 1.00 43.47 C
ATOM 7 C4' C B1898 116.393 113.239 82.962 1.00 43.83 C
ATOM 8 O4' C B1898 115.579 112.045 83.097 1.00 44.06 O
ATOM 9 C3' C B1898 116.797 113.618 84.380 1.00 43.03 C
ATOM 10 O3' C B1898 116.988 115.033 84.445 1.00 42.74 O
ATOM 11 C2' C B1898 115.604 113.147 85.208 1.00 43.64 C
ATOM 12 O2' C B1898 114.537 114.071 85.218 1.00 42.53 O
ATOM 13 C1' C B1898 115.167 111.894 84.439 1.00 44.27 C
ATOM 14 N1 C B1898 115.692 110.602 84.921 1.00 45.80 N
ATOM 15 C2 C B1898 114.813 109.517 85.027 1.00 45.94 C
ATOM 16 O2 C B1898 113.617 109.680 84.743 1.00 46.32 O
ATOM 17 N3 C B1898 115.289 108.317 85.434 1.00 46.21 N
ATOM 18 C4 C B1898 116.584 108.177 85.728 1.00 46.81 C
ATOM 19 N4 C B1898 117.015 106.970 86.102 1.00 46.61 N
ATOM 20 C5 C B1898 117.498 109.267 85.644 1.00 46.78 C
ATOM 21 C6 C B1898 117.015 110.450 85.242 1.00 46.84 C
ATOM 22 P A B1899 117.885 115.686 85.609 1.00 43.79 P
ATOM 23 OP1 A B1899 119.267 115.840 85.093 1.00 44.37 O
ATOM 24 OP2 A B1899 117.656 114.950 86.875 1.00 43.07 O
ATOM 25 O5' A B1899 117.260 117.144 85.758 1.00 42.63 O
TER
Atoms:
C2: (116.012,105.876,81.718)
OP1: (120.394,101.734,86.474)
OP2: (120.892,104.241,86.748)
C4: (116.826,108.024,82.079)
O5': (118.683,103.460,85.892)
C3': (118.208,101.981,83.478)
C1': (117.147,103.909,82.682)
O4': (116.488,103.571,83.884)
C5': (117.522,102.609,85.863)
P: (119.931,103.105,86.814)
O2: (115.182,105.090,81.226)
C4': (117.090,102.368,84.438)
C2': (118.543,103.306,82.808)
O2': (119.131,103.136,81.531)
N1: (117.064,105.364,82.485)
N3: (115.923,107.212,81.532)
N4: (116.689,109.333,81.885)
C6: (117.988,106.208,83.035)
C5: (117.907,107.530,82.856)
O3': (117.665,101.147,82.480)
OP1: (120.394,101.734,86.474)
OP2: (120.892,104.241,86.748)
C4: (116.826,108.024,82.079)
O5': (118.683,103.460,85.892)
C3': (118.208,101.981,83.478)
C1': (117.147,103.909,82.682)
O4': (116.488,103.571,83.884)
C5': (117.522,102.609,85.863)
P: (119.931,103.105,86.814)
O2: (115.182,105.090,81.226)
C4': (117.090,102.368,84.438)
C2': (118.543,103.306,82.808)
O2': (119.131,103.136,81.531)
N1: (117.064,105.364,82.485)
N3: (115.923,107.212,81.532)
N4: (116.689,109.333,81.885)
C6: (117.988,106.208,83.035)
C5: (117.907,107.530,82.856)
O3': (117.665,101.147,82.480)
C2: (114.813,109.517,85.027)
OP1: (120.312,113.085,83.118)
OP2: (120.323,110.526,83.152)
C4: (116.584,108.177,85.728)
O5': (118.281,111.798,82.509)
C3': (116.797,113.618,84.380)
C1': (115.167,111.894,84.439)
O4': (115.579,112.045,83.097)
C5': (117.546,112.941,82.030)
P: (119.870,111.794,82.541)
O2: (113.617,109.680,84.743)
C4': (116.393,113.239,82.962)
C2': (115.604,113.147,85.208)
O2': (114.537,114.071,85.218)
N1: (115.692,110.602,84.921)
N3: (115.289,108.317,85.434)
N4: (117.015,106.970,86.102)
C6: (117.015,110.450,85.242)
C5: (117.498,109.267,85.644)
O3': (116.988,115.033,84.445)
OP1: (120.312,113.085,83.118)
OP2: (120.323,110.526,83.152)
C4: (116.584,108.177,85.728)
O5': (118.281,111.798,82.509)
C3': (116.797,113.618,84.380)
C1': (115.167,111.894,84.439)
O4': (115.579,112.045,83.097)
C5': (117.546,112.941,82.030)
P: (119.870,111.794,82.541)
O2: (113.617,109.680,84.743)
C4': (116.393,113.239,82.962)
C2': (115.604,113.147,85.208)
O2': (114.537,114.071,85.218)
N1: (115.692,110.602,84.921)
N3: (115.289,108.317,85.434)
N4: (117.015,106.970,86.102)
C6: (117.015,110.450,85.242)
C5: (117.498,109.267,85.644)
O3': (116.988,115.033,84.445)
Image (generated by PyMOL):