ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1857:A1881

Extra

PDB:
ATOM 1 O3' U A1856 88.713 -26.868 4.070 1.00 45.36 O
ATOM 2 P C A1857 88.818 -28.420 3.633 1.00 50.01 P
ATOM 3 OP1 C A1857 87.762 -28.673 2.625 1.00 77.10 O
ATOM 4 OP2 C A1857 88.810 -29.222 4.884 1.00 81.49 O
ATOM 5 O5' C A1857 90.247 -28.500 2.949 1.00 40.29 O
ATOM 6 C5' C A1857 90.551 -29.540 2.045 1.00 49.70 C
ATOM 7 C4' C A1857 92.038 -29.708 1.865 1.00 51.30 C
ATOM 8 O4' C A1857 92.588 -28.588 1.128 1.00 59.36 O
ATOM 9 C3' C A1857 92.859 -29.784 3.134 1.00 39.42 C
ATOM 10 O3' C A1857 92.887 -31.094 3.647 1.00 46.89 O
ATOM 11 C2' C A1857 94.228 -29.315 2.678 1.00 49.61 C
ATOM 12 O2' C A1857 94.924 -30.396 2.086 1.00 53.40 O
ATOM 13 C1' C A1857 93.882 -28.295 1.582 1.00 48.15 C
ATOM 14 N1 C A1857 93.882 -26.898 2.074 1.00 44.66 N
ATOM 15 C2 C A1857 95.016 -26.212 2.513 1.00 52.09 C
ATOM 16 O2 C A1857 96.105 -26.782 2.510 1.00 66.38 O
ATOM 17 N3 C A1857 94.917 -24.942 2.953 1.00 48.52 N
ATOM 18 C4 C A1857 93.726 -24.340 2.955 1.00 54.24 C
ATOM 19 N4 C A1857 93.616 -23.070 3.381 1.00 56.21 N
ATOM 20 C5 C A1857 92.561 -25.015 2.509 1.00 56.07 C
ATOM 21 C6 C A1857 92.685 -26.267 2.079 1.00 50.72 C
ATOM 22 P C A1858 92.704 -31.371 5.213 1.00 46.72 P
ATOM 23 OP1 C A1858 92.855 -32.832 5.409 1.00 48.08 O
ATOM 24 OP2 C A1858 91.445 -30.734 5.633 1.00 49.17 O
ATOM 25 O5' C A1858 93.953 -30.608 5.851 1.00 56.25 O
TER

ATOM 1 O3' G B1880 91.174 -19.243 0.619 1.00 38.65 O
ATOM 2 P C B1881 91.526 -20.755 1.079 1.00 50.83 P
ATOM 3 OP1 C B1881 90.266 -21.524 1.049 1.00 61.46 O
ATOM 4 OP2 C B1881 92.282 -20.677 2.358 1.00 48.56 O
ATOM 5 O5' C B1881 92.475 -21.259 -0.080 1.00 45.60 O
ATOM 6 C5' C B1881 93.710 -20.621 -0.337 1.00 42.88 C
ATOM 7 C4' C B1881 94.788 -21.635 -0.538 1.00 40.07 C
ATOM 8 O4' C B1881 94.444 -22.839 0.187 1.00 44.09 O
ATOM 9 C3' C B1881 94.982 -22.106 -1.964 1.00 44.14 C
ATOM 10 O3' C B1881 95.796 -21.232 -2.712 1.00 43.30 O
ATOM 11 C2' C B1881 95.582 -23.495 -1.784 1.00 51.12 C
ATOM 12 O2' C B1881 96.969 -23.416 -1.489 1.00 52.02 O
ATOM 13 C1' C B1881 94.855 -23.977 -0.537 1.00 49.38 C
ATOM 14 N1 C B1881 93.670 -24.782 -0.872 1.00 47.62 N
ATOM 15 C2 C B1881 93.869 -26.084 -1.352 1.00 60.46 C
ATOM 16 O2 C B1881 95.024 -26.541 -1.493 1.00 70.49 O
ATOM 17 N3 C B1881 92.788 -26.834 -1.670 1.00 65.90 N
ATOM 18 C4 C B1881 91.559 -26.342 -1.524 1.00 56.49 C
ATOM 19 N4 C B1881 90.543 -27.146 -1.854 1.00 53.73 N
ATOM 20 C5 C B1881 91.340 -25.018 -1.035 1.00 52.66 C
ATOM 21 C6 C B1881 92.412 -24.277 -0.727 1.00 52.30 C
ATOM 22 P A B1882 95.216 -20.503 -4.010 1.00 51.40 P
ATOM 23 OP1 A B1882 95.452 -21.406 -5.153 1.00 67.98 O
ATOM 24 OP2 A B1882 95.784 -19.129 -4.051 1.00 60.14 O
ATOM 25 O5' A B1882 93.675 -20.422 -3.705 1.00 50.34 O
TER

Atoms:
C2: (95.016,-26.212,2.513)
OP1: (87.762,-28.673,2.625)
OP2: (88.810,-29.222,4.884)
C4: (93.726,-24.340,2.955)
O5': (90.247,-28.500,2.949)
C3': (92.859,-29.784,3.134)
C1': (93.882,-28.295,1.582)
O4': (92.588,-28.588,1.128)
C5': (90.551,-29.540,2.045)
P: (88.818,-28.420,3.633)
O2: (96.105,-26.782,2.510)
C4': (92.038,-29.708,1.865)
C2': (94.228,-29.315,2.678)
O2': (94.924,-30.396,2.086)
N1: (93.882,-26.898,2.074)
N3: (94.917,-24.942,2.953)
N4: (93.616,-23.070,3.381)
C6: (92.685,-26.267,2.079)
C5: (92.561,-25.015,2.509)
O3': (92.887,-31.094,3.647)
C2: (93.869,-26.084,-1.352)
OP1: (90.266,-21.524,1.049)
OP2: (92.282,-20.677,2.358)
C4: (91.559,-26.342,-1.524)
O5': (92.475,-21.259,-0.080)
C3': (94.982,-22.106,-1.964)
C1': (94.855,-23.977,-0.537)
O4': (94.444,-22.839,0.187)
C5': (93.710,-20.621,-0.337)
P: (91.526,-20.755,1.079)
O2: (95.024,-26.541,-1.493)
C4': (94.788,-21.635,-0.538)
C2': (95.582,-23.495,-1.784)
O2': (96.969,-23.416,-1.489)
N1: (93.670,-24.782,-0.872)
N3: (92.788,-26.834,-1.670)
N4: (90.543,-27.146,-1.854)
C6: (92.412,-24.277,-0.727)
C5: (91.340,-25.018,-1.035)
O3': (95.796,-21.232,-2.712)
Image (generated by PyMOL):
PyMOL image
show in jmol