Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:01234:01240
Extra
PDB:
ATOM 1 O3' A A1233 4.716 79.505 67.749 1.00 46.05 O
ATOM 2 P C A1234 4.999 79.644 66.177 1.00 47.25 P
ATOM 3 OP1 C A1234 4.384 78.455 65.517 1.00 47.08 O
ATOM 4 OP2 C A1234 6.448 79.923 65.979 1.00 46.75 O
ATOM 5 O5' C A1234 4.169 80.944 65.780 1.00 44.41 O
ATOM 6 C5' C A1234 2.744 80.939 65.848 1.00 44.53 C
ATOM 7 C4' C A1234 2.195 82.310 65.548 1.00 45.51 C
ATOM 8 O4' C A1234 2.571 83.227 66.602 1.00 47.47 O
ATOM 9 C3' C A1234 2.715 82.992 64.302 1.00 46.13 C
ATOM 10 O3' C A1234 2.108 82.498 63.125 1.00 48.29 O
ATOM 11 C2' C A1234 2.353 84.440 64.579 1.00 47.17 C
ATOM 12 O2' C A1234 0.981 84.705 64.390 1.00 48.29 O
ATOM 13 C1' C A1234 2.675 84.539 66.071 1.00 47.03 C
ATOM 14 N1 C A1234 4.043 85.042 66.299 1.00 47.26 N
ATOM 15 C2 C A1234 4.268 86.428 66.241 1.00 48.01 C
ATOM 16 O2 C A1234 3.303 87.196 66.055 1.00 49.54 O
ATOM 17 N3 C A1234 5.525 86.896 66.390 1.00 47.63 N
ATOM 18 C4 C A1234 6.531 86.050 66.596 1.00 46.92 C
ATOM 19 N4 C A1234 7.753 86.564 66.725 1.00 48.61 N
ATOM 20 C5 C A1234 6.329 84.641 66.682 1.00 46.81 C
ATOM 21 C6 C A1234 5.082 84.185 66.535 1.00 46.28 C
ATOM 22 P U A1235 3.020 82.186 61.839 1.00 51.14 P
ATOM 23 OP1 U A1235 2.138 81.718 60.734 1.00 52.14 O
ATOM 24 OP2 U A1235 4.151 81.324 62.289 1.00 49.54 O
ATOM 25 O5' U A1235 3.579 83.621 61.432 1.00 51.43 O
TER
ATOM 1 O3' A B1239 7.932 98.071 65.683 1.00 80.54 O
ATOM 2 P C B1240 7.351 97.897 67.176 1.00 79.82 P
ATOM 3 OP1 C B1240 7.465 99.210 67.865 1.00 79.10 O
ATOM 4 OP2 C B1240 7.951 96.680 67.795 1.00 79.66 O
ATOM 5 O5' C B1240 5.804 97.610 66.957 1.00 76.47 O
ATOM 6 C5' C B1240 5.026 97.027 68.000 1.00 71.83 C
ATOM 7 C4' C B1240 3.643 96.710 67.503 1.00 69.00 C
ATOM 8 O4' C B1240 3.708 95.821 66.356 1.00 68.39 O
ATOM 9 C3' C B1240 2.821 95.942 68.513 1.00 67.37 C
ATOM 10 O3' C B1240 2.266 96.824 69.465 1.00 65.70 O
ATOM 11 C2' C B1240 1.789 95.246 67.639 1.00 67.14 C
ATOM 12 O2' C B1240 0.723 96.094 67.251 1.00 65.63 O
ATOM 13 C1' C B1240 2.645 94.879 66.422 1.00 66.36 C
ATOM 14 N1 C B1240 3.226 93.520 66.502 1.00 64.59 N
ATOM 15 C2 C B1240 2.375 92.406 66.353 1.00 64.08 C
ATOM 16 O2 C B1240 1.153 92.592 66.167 1.00 64.78 O
ATOM 17 N3 C B1240 2.906 91.160 66.417 1.00 62.16 N
ATOM 18 C4 C B1240 4.217 91.000 66.616 1.00 60.28 C
ATOM 19 N4 C B1240 4.693 89.755 66.667 1.00 59.47 N
ATOM 20 C5 C B1240 5.097 92.109 66.773 1.00 60.85 C
ATOM 21 C6 C B1240 4.566 93.338 66.712 1.00 62.30 C
ATOM 22 P U B1241 2.348 96.453 71.016 1.00 63.52 P
ATOM 23 OP1 U B1241 1.574 97.503 71.717 1.00 65.08 O
ATOM 24 OP2 U B1241 3.767 96.212 71.385 1.00 62.34 O
ATOM 25 O5' U B1241 1.541 95.086 71.105 1.00 62.06 O
TER
ATOM 2 P C A1234 4.999 79.644 66.177 1.00 47.25 P
ATOM 3 OP1 C A1234 4.384 78.455 65.517 1.00 47.08 O
ATOM 4 OP2 C A1234 6.448 79.923 65.979 1.00 46.75 O
ATOM 5 O5' C A1234 4.169 80.944 65.780 1.00 44.41 O
ATOM 6 C5' C A1234 2.744 80.939 65.848 1.00 44.53 C
ATOM 7 C4' C A1234 2.195 82.310 65.548 1.00 45.51 C
ATOM 8 O4' C A1234 2.571 83.227 66.602 1.00 47.47 O
ATOM 9 C3' C A1234 2.715 82.992 64.302 1.00 46.13 C
ATOM 10 O3' C A1234 2.108 82.498 63.125 1.00 48.29 O
ATOM 11 C2' C A1234 2.353 84.440 64.579 1.00 47.17 C
ATOM 12 O2' C A1234 0.981 84.705 64.390 1.00 48.29 O
ATOM 13 C1' C A1234 2.675 84.539 66.071 1.00 47.03 C
ATOM 14 N1 C A1234 4.043 85.042 66.299 1.00 47.26 N
ATOM 15 C2 C A1234 4.268 86.428 66.241 1.00 48.01 C
ATOM 16 O2 C A1234 3.303 87.196 66.055 1.00 49.54 O
ATOM 17 N3 C A1234 5.525 86.896 66.390 1.00 47.63 N
ATOM 18 C4 C A1234 6.531 86.050 66.596 1.00 46.92 C
ATOM 19 N4 C A1234 7.753 86.564 66.725 1.00 48.61 N
ATOM 20 C5 C A1234 6.329 84.641 66.682 1.00 46.81 C
ATOM 21 C6 C A1234 5.082 84.185 66.535 1.00 46.28 C
ATOM 22 P U A1235 3.020 82.186 61.839 1.00 51.14 P
ATOM 23 OP1 U A1235 2.138 81.718 60.734 1.00 52.14 O
ATOM 24 OP2 U A1235 4.151 81.324 62.289 1.00 49.54 O
ATOM 25 O5' U A1235 3.579 83.621 61.432 1.00 51.43 O
TER
ATOM 1 O3' A B1239 7.932 98.071 65.683 1.00 80.54 O
ATOM 2 P C B1240 7.351 97.897 67.176 1.00 79.82 P
ATOM 3 OP1 C B1240 7.465 99.210 67.865 1.00 79.10 O
ATOM 4 OP2 C B1240 7.951 96.680 67.795 1.00 79.66 O
ATOM 5 O5' C B1240 5.804 97.610 66.957 1.00 76.47 O
ATOM 6 C5' C B1240 5.026 97.027 68.000 1.00 71.83 C
ATOM 7 C4' C B1240 3.643 96.710 67.503 1.00 69.00 C
ATOM 8 O4' C B1240 3.708 95.821 66.356 1.00 68.39 O
ATOM 9 C3' C B1240 2.821 95.942 68.513 1.00 67.37 C
ATOM 10 O3' C B1240 2.266 96.824 69.465 1.00 65.70 O
ATOM 11 C2' C B1240 1.789 95.246 67.639 1.00 67.14 C
ATOM 12 O2' C B1240 0.723 96.094 67.251 1.00 65.63 O
ATOM 13 C1' C B1240 2.645 94.879 66.422 1.00 66.36 C
ATOM 14 N1 C B1240 3.226 93.520 66.502 1.00 64.59 N
ATOM 15 C2 C B1240 2.375 92.406 66.353 1.00 64.08 C
ATOM 16 O2 C B1240 1.153 92.592 66.167 1.00 64.78 O
ATOM 17 N3 C B1240 2.906 91.160 66.417 1.00 62.16 N
ATOM 18 C4 C B1240 4.217 91.000 66.616 1.00 60.28 C
ATOM 19 N4 C B1240 4.693 89.755 66.667 1.00 59.47 N
ATOM 20 C5 C B1240 5.097 92.109 66.773 1.00 60.85 C
ATOM 21 C6 C B1240 4.566 93.338 66.712 1.00 62.30 C
ATOM 22 P U B1241 2.348 96.453 71.016 1.00 63.52 P
ATOM 23 OP1 U B1241 1.574 97.503 71.717 1.00 65.08 O
ATOM 24 OP2 U B1241 3.767 96.212 71.385 1.00 62.34 O
ATOM 25 O5' U B1241 1.541 95.086 71.105 1.00 62.06 O
TER
Atoms:
C2: (4.268,86.428,66.241)
OP1: (4.384,78.455,65.517)
OP2: (6.448,79.923,65.979)
C4: (6.531,86.050,66.596)
O5': (4.169,80.944,65.780)
C3': (2.715,82.992,64.302)
C1': (2.675,84.539,66.071)
O4': (2.571,83.227,66.602)
C5': (2.744,80.939,65.848)
P: (4.999,79.644,66.177)
O2: (3.303,87.196,66.055)
C4': (2.195,82.310,65.548)
C2': (2.353,84.440,64.579)
O2': (0.981,84.705,64.390)
N1: (4.043,85.042,66.299)
N3: (5.525,86.896,66.390)
N4: (7.753,86.564,66.725)
C6: (5.082,84.185,66.535)
C5: (6.329,84.641,66.682)
O3': (2.108,82.498,63.125)
OP1: (4.384,78.455,65.517)
OP2: (6.448,79.923,65.979)
C4: (6.531,86.050,66.596)
O5': (4.169,80.944,65.780)
C3': (2.715,82.992,64.302)
C1': (2.675,84.539,66.071)
O4': (2.571,83.227,66.602)
C5': (2.744,80.939,65.848)
P: (4.999,79.644,66.177)
O2: (3.303,87.196,66.055)
C4': (2.195,82.310,65.548)
C2': (2.353,84.440,64.579)
O2': (0.981,84.705,64.390)
N1: (4.043,85.042,66.299)
N3: (5.525,86.896,66.390)
N4: (7.753,86.564,66.725)
C6: (5.082,84.185,66.535)
C5: (6.329,84.641,66.682)
O3': (2.108,82.498,63.125)
C2: (2.375,92.406,66.353)
OP1: (7.465,99.210,67.865)
OP2: (7.951,96.680,67.795)
C4: (4.217,91.000,66.616)
O5': (5.804,97.610,66.957)
C3': (2.821,95.942,68.513)
C1': (2.645,94.879,66.422)
O4': (3.708,95.821,66.356)
C5': (5.026,97.027,68.000)
P: (7.351,97.897,67.176)
O2: (1.153,92.592,66.167)
C4': (3.643,96.710,67.503)
C2': (1.789,95.246,67.639)
O2': (0.723,96.094,67.251)
N1: (3.226,93.520,66.502)
N3: (2.906,91.160,66.417)
N4: (4.693,89.755,66.667)
C6: (4.566,93.338,66.712)
C5: (5.097,92.109,66.773)
O3': (2.266,96.824,69.465)
OP1: (7.465,99.210,67.865)
OP2: (7.951,96.680,67.795)
C4: (4.217,91.000,66.616)
O5': (5.804,97.610,66.957)
C3': (2.821,95.942,68.513)
C1': (2.645,94.879,66.422)
O4': (3.708,95.821,66.356)
C5': (5.026,97.027,68.000)
P: (7.351,97.897,67.176)
O2: (1.153,92.592,66.167)
C4': (3.643,96.710,67.503)
C2': (1.789,95.246,67.639)
O2': (0.723,96.094,67.251)
N1: (3.226,93.520,66.502)
N3: (2.906,91.160,66.417)
N4: (4.693,89.755,66.667)
C6: (4.566,93.338,66.712)
C5: (5.097,92.109,66.773)
O3': (2.266,96.824,69.465)
Image (generated by PyMOL):