Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01425:01436
Extra
PDB:
ATOM 1 O3' A A1424 95.161 136.377 31.373 1.00 44.62 O
ATOM 2 P C A1425 94.845 134.805 31.544 1.00 46.98 P
ATOM 3 OP1 C A1425 94.965 134.166 30.195 1.00 45.27 O
ATOM 4 OP2 C A1425 93.577 134.682 32.305 1.00 45.69 O
ATOM 5 O5' C A1425 96.035 134.265 32.456 1.00 44.15 O
ATOM 6 C5' C A1425 97.389 134.319 31.981 1.00 43.08 C
ATOM 7 C4' C A1425 98.349 133.920 33.068 1.00 42.97 C
ATOM 8 O4' C A1425 98.298 134.878 34.156 1.00 43.83 O
ATOM 9 C3' C A1425 98.069 132.599 33.750 1.00 43.82 C
ATOM 10 O3' C A1425 98.518 131.505 32.962 1.00 45.69 O
ATOM 11 C2' C A1425 98.852 132.746 35.048 1.00 43.48 C
ATOM 12 O2' C A1425 100.235 132.520 34.892 1.00 43.94 O
ATOM 13 C1' C A1425 98.617 134.223 35.375 1.00 42.82 C
ATOM 14 N1 C A1425 97.510 134.417 36.327 1.00 42.11 N
ATOM 15 C2 C A1425 97.760 134.253 37.697 1.00 42.20 C
ATOM 16 O2 C A1425 98.915 134.008 38.078 1.00 42.12 O
ATOM 17 N3 C A1425 96.740 134.369 38.570 1.00 43.88 N
ATOM 18 C4 C A1425 95.512 134.645 38.129 1.00 43.87 C
ATOM 19 N4 C A1425 94.526 134.712 39.027 1.00 44.60 N
ATOM 20 C5 C A1425 95.236 134.852 36.748 1.00 43.41 C
ATOM 21 C6 C A1425 96.253 134.729 35.890 1.00 42.64 C
ATOM 22 P C A1426 97.596 130.196 32.821 1.00 46.89 P
ATOM 23 OP1 C A1426 98.198 129.291 31.806 1.00 46.88 O
ATOM 24 OP2 C A1426 96.185 130.648 32.663 1.00 46.26 O
ATOM 25 O5' C A1426 97.740 129.481 34.232 1.00 45.34 O
TER
ATOM 1 O3' A B1435 99.057 134.764 49.721 1.00 59.09 O
ATOM 2 P C B1436 99.592 136.158 49.115 1.00 61.50 P
ATOM 3 OP1 C B1436 100.439 136.774 50.175 1.00 60.65 O
ATOM 4 OP2 C B1436 98.427 136.907 48.576 1.00 62.54 O
ATOM 5 O5' C B1436 100.518 135.744 47.883 1.00 58.52 O
ATOM 6 C5' C B1436 101.798 135.143 48.114 1.00 56.88 C
ATOM 7 C4' C B1436 102.512 134.862 46.811 1.00 56.79 C
ATOM 8 O4' C B1436 101.643 134.109 45.932 1.00 56.83 O
ATOM 9 C3' C B1436 102.879 136.046 45.929 1.00 56.17 C
ATOM 10 O3' C B1436 104.039 136.725 46.400 1.00 53.37 O
ATOM 11 C2' C B1436 103.167 135.357 44.596 1.00 56.22 C
ATOM 12 O2' C B1436 104.459 134.793 44.521 1.00 57.86 O
ATOM 13 C1' C B1436 102.136 134.224 44.606 1.00 55.78 C
ATOM 14 N1 C B1436 101.019 134.459 43.679 1.00 54.09 N
ATOM 15 C2 C B1436 101.207 134.154 42.329 1.00 54.10 C
ATOM 16 O2 C B1436 102.294 133.664 41.969 1.00 54.52 O
ATOM 17 N3 C B1436 100.207 134.399 41.449 1.00 53.63 N
ATOM 18 C4 C B1436 99.059 134.927 41.876 1.00 52.96 C
ATOM 19 N4 C B1436 98.112 135.184 40.968 1.00 52.01 N
ATOM 20 C5 C B1436 98.834 135.226 43.251 1.00 52.79 C
ATOM 21 C6 C B1436 99.829 134.977 44.110 1.00 53.42 C
ATOM 22 P U B1437 104.312 138.243 45.955 1.00 52.32 P
ATOM 23 OP1 U B1437 105.637 138.590 46.525 1.00 51.90 O
ATOM 24 OP2 U B1437 103.130 139.083 46.284 1.00 50.04 O
ATOM 25 O5' U B1437 104.453 138.153 44.373 1.00 51.27 O
TER
ATOM 2 P C A1425 94.845 134.805 31.544 1.00 46.98 P
ATOM 3 OP1 C A1425 94.965 134.166 30.195 1.00 45.27 O
ATOM 4 OP2 C A1425 93.577 134.682 32.305 1.00 45.69 O
ATOM 5 O5' C A1425 96.035 134.265 32.456 1.00 44.15 O
ATOM 6 C5' C A1425 97.389 134.319 31.981 1.00 43.08 C
ATOM 7 C4' C A1425 98.349 133.920 33.068 1.00 42.97 C
ATOM 8 O4' C A1425 98.298 134.878 34.156 1.00 43.83 O
ATOM 9 C3' C A1425 98.069 132.599 33.750 1.00 43.82 C
ATOM 10 O3' C A1425 98.518 131.505 32.962 1.00 45.69 O
ATOM 11 C2' C A1425 98.852 132.746 35.048 1.00 43.48 C
ATOM 12 O2' C A1425 100.235 132.520 34.892 1.00 43.94 O
ATOM 13 C1' C A1425 98.617 134.223 35.375 1.00 42.82 C
ATOM 14 N1 C A1425 97.510 134.417 36.327 1.00 42.11 N
ATOM 15 C2 C A1425 97.760 134.253 37.697 1.00 42.20 C
ATOM 16 O2 C A1425 98.915 134.008 38.078 1.00 42.12 O
ATOM 17 N3 C A1425 96.740 134.369 38.570 1.00 43.88 N
ATOM 18 C4 C A1425 95.512 134.645 38.129 1.00 43.87 C
ATOM 19 N4 C A1425 94.526 134.712 39.027 1.00 44.60 N
ATOM 20 C5 C A1425 95.236 134.852 36.748 1.00 43.41 C
ATOM 21 C6 C A1425 96.253 134.729 35.890 1.00 42.64 C
ATOM 22 P C A1426 97.596 130.196 32.821 1.00 46.89 P
ATOM 23 OP1 C A1426 98.198 129.291 31.806 1.00 46.88 O
ATOM 24 OP2 C A1426 96.185 130.648 32.663 1.00 46.26 O
ATOM 25 O5' C A1426 97.740 129.481 34.232 1.00 45.34 O
TER
ATOM 1 O3' A B1435 99.057 134.764 49.721 1.00 59.09 O
ATOM 2 P C B1436 99.592 136.158 49.115 1.00 61.50 P
ATOM 3 OP1 C B1436 100.439 136.774 50.175 1.00 60.65 O
ATOM 4 OP2 C B1436 98.427 136.907 48.576 1.00 62.54 O
ATOM 5 O5' C B1436 100.518 135.744 47.883 1.00 58.52 O
ATOM 6 C5' C B1436 101.798 135.143 48.114 1.00 56.88 C
ATOM 7 C4' C B1436 102.512 134.862 46.811 1.00 56.79 C
ATOM 8 O4' C B1436 101.643 134.109 45.932 1.00 56.83 O
ATOM 9 C3' C B1436 102.879 136.046 45.929 1.00 56.17 C
ATOM 10 O3' C B1436 104.039 136.725 46.400 1.00 53.37 O
ATOM 11 C2' C B1436 103.167 135.357 44.596 1.00 56.22 C
ATOM 12 O2' C B1436 104.459 134.793 44.521 1.00 57.86 O
ATOM 13 C1' C B1436 102.136 134.224 44.606 1.00 55.78 C
ATOM 14 N1 C B1436 101.019 134.459 43.679 1.00 54.09 N
ATOM 15 C2 C B1436 101.207 134.154 42.329 1.00 54.10 C
ATOM 16 O2 C B1436 102.294 133.664 41.969 1.00 54.52 O
ATOM 17 N3 C B1436 100.207 134.399 41.449 1.00 53.63 N
ATOM 18 C4 C B1436 99.059 134.927 41.876 1.00 52.96 C
ATOM 19 N4 C B1436 98.112 135.184 40.968 1.00 52.01 N
ATOM 20 C5 C B1436 98.834 135.226 43.251 1.00 52.79 C
ATOM 21 C6 C B1436 99.829 134.977 44.110 1.00 53.42 C
ATOM 22 P U B1437 104.312 138.243 45.955 1.00 52.32 P
ATOM 23 OP1 U B1437 105.637 138.590 46.525 1.00 51.90 O
ATOM 24 OP2 U B1437 103.130 139.083 46.284 1.00 50.04 O
ATOM 25 O5' U B1437 104.453 138.153 44.373 1.00 51.27 O
TER
Atoms:
C2: (97.760,134.253,37.697)
OP1: (94.965,134.166,30.195)
OP2: (93.577,134.682,32.305)
C4: (95.512,134.645,38.129)
O5': (96.035,134.265,32.456)
C3': (98.069,132.599,33.750)
C1': (98.617,134.223,35.375)
O4': (98.298,134.878,34.156)
C5': (97.389,134.319,31.981)
P: (94.845,134.805,31.544)
O2: (98.915,134.008,38.078)
C4': (98.349,133.920,33.068)
C2': (98.852,132.746,35.048)
O2': (100.235,132.520,34.892)
N1: (97.510,134.417,36.327)
N3: (96.740,134.369,38.570)
N4: (94.526,134.712,39.027)
C6: (96.253,134.729,35.890)
C5: (95.236,134.852,36.748)
O3': (98.518,131.505,32.962)
OP1: (94.965,134.166,30.195)
OP2: (93.577,134.682,32.305)
C4: (95.512,134.645,38.129)
O5': (96.035,134.265,32.456)
C3': (98.069,132.599,33.750)
C1': (98.617,134.223,35.375)
O4': (98.298,134.878,34.156)
C5': (97.389,134.319,31.981)
P: (94.845,134.805,31.544)
O2: (98.915,134.008,38.078)
C4': (98.349,133.920,33.068)
C2': (98.852,132.746,35.048)
O2': (100.235,132.520,34.892)
N1: (97.510,134.417,36.327)
N3: (96.740,134.369,38.570)
N4: (94.526,134.712,39.027)
C6: (96.253,134.729,35.890)
C5: (95.236,134.852,36.748)
O3': (98.518,131.505,32.962)
C2: (101.207,134.154,42.329)
OP1: (100.439,136.774,50.175)
OP2: (98.427,136.907,48.576)
C4: (99.059,134.927,41.876)
O5': (100.518,135.744,47.883)
C3': (102.879,136.046,45.929)
C1': (102.136,134.224,44.606)
O4': (101.643,134.109,45.932)
C5': (101.798,135.143,48.114)
P: (99.592,136.158,49.115)
O2: (102.294,133.664,41.969)
C4': (102.512,134.862,46.811)
C2': (103.167,135.357,44.596)
O2': (104.459,134.793,44.521)
N1: (101.019,134.459,43.679)
N3: (100.207,134.399,41.449)
N4: (98.112,135.184,40.968)
C6: (99.829,134.977,44.110)
C5: (98.834,135.226,43.251)
O3': (104.039,136.725,46.400)
OP1: (100.439,136.774,50.175)
OP2: (98.427,136.907,48.576)
C4: (99.059,134.927,41.876)
O5': (100.518,135.744,47.883)
C3': (102.879,136.046,45.929)
C1': (102.136,134.224,44.606)
O4': (101.643,134.109,45.932)
C5': (101.798,135.143,48.114)
P: (99.592,136.158,49.115)
O2: (102.294,133.664,41.969)
C4': (102.512,134.862,46.811)
C2': (103.167,135.357,44.596)
O2': (104.459,134.793,44.521)
N1: (101.019,134.459,43.679)
N3: (100.207,134.399,41.449)
N4: (98.112,135.184,40.968)
C6: (99.829,134.977,44.110)
C5: (98.834,135.226,43.251)
O3': (104.039,136.725,46.400)
Image (generated by PyMOL):